mkxb (mkxb,LOC107681765,LOC107566716,LOC107691300,LOC107550429,LOC107747522,LOC107708850)


Basic Information

Item Value
gene id mkxb
gene name mkxb,LOC107681765,LOC107566716,LOC107691300,LOC107550429,LOC107747522,LOC107708850
gene type misc
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056714.1
NCBI id CM032083.1
chromosome length 28146790
location 8082900 ~ 8092455 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU163295
AAATGACATAGTGAAGAAAGTTTGATGTGTGGAAGATCACTACAACTAAACACAGAAGCACAAAAATATGATCTTATTCCGATTTAGACtctgaaatacaatttttgtcagtagctaaaatgtaatatattcatatatatattcaattttcCTAAgttatgttaattttatttttaatcgaCACAGGATTGTTGTCATCCTATGGCAATGGCATATACATGTGGGTTCTTGTGTTTAAGTATTGCATATAGAGgaagtttctttttctttcttttttatattcttttttttttttttgaatttttttaacaaaccttTGGTTTGTTATTGGATGGCTTTTAAGTTCATTTGGGCCATTGCCTGTGAAGATAATCATGCAAAATTCAGTCAAATGAGAgcta
>TU163299
CCAAACTGTGTTTTCAGTGACGCTGGACTGCGGCACGCGCCAAAGTGAGAGCGGTGCTCGCAAAGGTGGCGGAGGAGGAAATAACGAGACCTACTGGAAAGAGCTCCATGCCGCCATGGCCCTGACCAACCTGGCCCAAGGGAAGGAGACCTCAACGTCGGGCACAACCAGCTGTATCATCCAGAAGTCTTCCCATATAGCAGAGATTAAGACTGTCAAAGTACCCATACAACCCCGACATTAGTGGCTAACAGACTGGACAGCGCTCTGTACTCTGTCATAATTACTAAAAGACTACCTGAACACTTGAGTATGTACTACATGCAATAATTTTGTTGAAAACGATCCACAACAGCCTTTTCTAGGAGGAAAACT
>TU163302
AAGACACTCAAATTATAGTGTCCTCGTAGTTCAGCGACTAACAGGATAACTTTgagaataatttcaaataacaaCCCATTCGTTCTCAATTATACCAGCATAAGGACATTTCCTGTACGGTCTTTGGAGCTACATTATCATATGGCACATGGCAGTTAATGAATGCAGCGCGAGCAGCGATGAACACGACGGTCTTCAGTAAGTTTGATCAGCTGCGTTTTGAAGAAAGCGGACAGAACGTGGAGAGAACCAGCAGAAGCTATTTAGAGGTGATTGATGGACAACATTCAGATTTACTGACCGGCCACAAAGTGATGGGTGGCACCGAAGCTCTCAAACACAGGAGAaatggTGGAGGGAAGGTGCGACACAAACGTCAGGCCCTGCAGGATATGGCCCGGCCGCTGAAGCAGTGGCT
>XM_043260482.1
GTATTCATGTTCCGGGGTTTCGAACCCTCCAGAGTCGGGCTGATATAGCGGAGAGCTGCAGTAGCTGAGCGCAGTGCTGTTGAATATGAGCGGATGGGATGGAAGACACTCAAATTATAGTGTCCTCGTAGTTCAGCGACTAACAGGATAACTTTgagaataatttcaaataacaaCCCATTCGTTCTCAATTATACCAGCATAAGGACATTTCCTGTACGGTCTTTGGAGCTACATTATCATATGGCACATGGCAGTTAATGAATGCAGCGCGAGCAGCGATGAACACGACGGTCTTCAGTAAGTTTGATCAGCTGCGTTTTGAAGAAAGCGGACAGAACGTGGAGAGAACCAGCAGAAGCTATTTAGAGGTGATTGATGGACAACATTCAGATTTACTGACCGGCCACAAAGTGATGGGTGGCACCGAAGCTCTCAAACACAGGAGAaatggTGGAGGGAAGGTGCGACACAAACGTCAGGCCCTGCAGGATATGGCCCGGCCGCTGAAGCAGTGGCTCTATAAGCACAGGGACAACCCTTACCCCACCAAGACTGAGAAGATACTGCTGGCTCTGGGCTCCCACATGACCCTGGTTCAGgtcTCCAACTGGTTTGCAAATGCGAGGCGTAGGCTCAAGAACACAGTTCGACAGCCTGACCTGAGCTGGGCCCTACGCATAAAGCTGTACAACAAATATGTACAAGGCAATGCCGAGAGACTCAGCATTAGCAGCGATGACACAACGTCAGACGATGGGGAGAATCCTTTACAGATTCAGGCCAGCGAATCAGACTATAACAGGCCAACGCACAAGACCGTTATTCAGGACAGCAGAGGCAAAGGGGTGGGGCGTAGCGCAGACCCCTCGGTTTGTGATGATTATGTGTCTCCACCAAAATACAAGAACAGCTTGCTAAACCGCTATCTAAATGATTCCCTTCGGCATGTGATGGCCTCCGAAAAAGTTCTGGACTCTCGGAAGAGGAACCATTCTGGATCGTTTAGTTCCAACGAGTATGAGGATGATTTTCTCTCGCCGTCTTCAGAAGCTGAGGCAAACTTCACCTACCGTACAGTGACGCTGGACTGCGGCACGCGCCAAAGTGAGAGCGGTGCTCGCAAAGGTGGCGGAGGAGGAAATAACGAGACCTACTGGAAAGAGCTCCATGCCGCCATGGCCCTGACCAACCTGGCCCAAGGGAAGGAGACCTCAACGTCGGGCACAACCAGCTGTATCATCCAGAAGTCTTCCCATATAGCAGAGATTAAGACTGTCAAAGTACCCATACAACCCCGACATTAGTGGCTAACAGACTGGACAGCGCTCTGTACTCTGTCATAATTACTAAAAGACTACCTGAACACTTGAGTATGTACTACATGCAATAATTTTGTTGAAAACGATCCACAACAGCCTTTTCTAGGAGGAAAACTACATGTTGACCGACCAACGTgcctatttttttcttttccttttttttttcgtacCACTGTCCAATGAAAAATGACATAGTGAAGAAAGTTTGATGTGTGGAAGATCACTACAACTAAACACAGAAGCACAAAAATATGATCTTATTCCGATTTAGACtctgaaatacaatttttgtcagtagctaaaatgtaatatattcatatatatattcaattttcCTAAgttatgttaattttatttttaatcgaCACAGGATTGTTGTCATCCTATGGCAATGGCATATACATGTGGGTTCTTGTGTTTAAGTATTGCATATAGAGgaagtttctttttctttcttttttatattcttttttttttttttgaatttttttaacaaaccttTGGTTTGTTATTGGATGGCTTTTAAGTTCATTTGGGCCATTGCCTGTGAAGATAATCATGCAAAATTCAGTCAAATGA
>XM_043260483.1
GTATTCATGTTCCGGGGTTTCGAACCCTCCAGAGTCGGGCTGATATAGCGGAGAGCTGCAGTAGCTGAGCGCAGTGCTGTTGAATATGAGCGGATGGGATGGAAGACACTCAAATTATAGTGTCCTCGTAGTTCAGCGACTAACAGGATAACTTTCATAAGGACATTTCCTGTACGGTCTTTGGAGCTACATTATCATATGGCACATGGCAGTTAATGAATGCAGCGCGAGCAGCGATGAACACGACGGTCTTCAGTAAGTTTGATCAGCTGCGTTTTGAAGAAAGCGGACAGAACGTGGAGAGAACCAGCAGAAGCTATTTAGAGGTGATTGATGGACAACATTCAGATTTACTGACCGGCCACAAAGTGATGGGTGGCACCGAAGCTCTCAAACACAGGAGAaatggTGGAGGGAAGGTGCGACACAAACGTCAGGCCCTGCAGGATATGGCCCGGCCGCTGAAGCAGTGGCTCTATAAGCACAGGGACAACCCTTACCCCACCAAGACTGAGAAGATACTGCTGGCTCTGGGCTCCCACATGACCCTGGTTCAGgtcTCCAACTGGTTTGCAAATGCGAGGCGTAGGCTCAAGAACACAGTTCGACAGCCTGACCTGAGCTGGGCCCTACGCATAAAGCTGTACAACAAATATGTACAAGGCAATGCCGAGAGACTCAGCATTAGCAGCGATGACACAACGTCAGACGATGGGGAGAATCCTTTACAGATTCAGGCCAGCGAATCAGACTATAACAGGCCAACGCACAAGACCGTTATTCAGGACAGCAGAGGCAAAGGGGTGGGGCGTAGCGCAGACCCCTCGGTTTGTGATGATTATGTGTCTCCACCAAAATACAAGAACAGCTTGCTAAACCGCTATCTAAATGATTCCCTTCGGCATGTGATGGCCTCCGAAAAAGTTCTGGACTCTCGGAAGAGGAACCATTCTGGATCGTTTAGTTCCAACGAGTATGAGGATGATTTTCTCTCGCCGTCTTCAGAAGCTGAGGCAAACTTCACCTACCGTACAGTGACGCTGGACTGCGGCACGCGCCAAAGTGAGAGCGGTGCTCGCAAAGGTGGCGGAGGAGGAAATAACGAGACCTACTGGAAAGAGCTCCATGCCGCCATGGCCCTGACCAACCTGGCCCAAGGGAAGGAGACCTCAACGTCGGGCACAACCAGCTGTATCATCCAGAAGTCTTCCCATATAGCAGAGATTAAGACTGTCAAAGTACCCATACAACCCCGACATTAGTGGCTAACAGACTGGACAGCGCTCTGTACTCTGTCATAATTACTAAAAGACTACCTGAACACTTGAGTATGTACTACATGCAATAATTTTGTTGAAAACGATCCACAACAGCCTTTTCTAGGAGGAAAACTACATGTTGACCGACCAACGTgcctatttttttcttttccttttttttttcgtacCACTGTCCAATGAAAAATGACATAGTGAAGAAAGTTTGATGTGTGGAAGATCACTACAACTAAACACAGAAGCACAAAAATATGATCTTATTCCGATTTAGACtctgaaatacaatttttgtcagtagctaaaatgtaatatattcatatatatattcaattttcCTAAgttatgttaattttatttttaatcgaCACAGGATTGTTGTCATCCTATGGCAATGGCATATACATGTGGGTTCTTGTGTTTAAGTATTGCATATAGAGgaagtttctttttctttcttttttatattcttttttttttttttgaatttttttaacaaaccttTGGTTTGTTATTGGATGGCTTTTAAGTTCATTTGGGCCATTGCCTGTGAAGATAATCATGCAAAATTCAGTCAAATGA

Function

symbol description
mkxb Predicted to enable DNA-binding transcription factor activity, RNA polymerase II-specific and RNA polymerase II cis-regulatory region sequence-specific DNA binding activity. Predicted to be involved in cell development; muscle organ development; and regulation of transcription by RNA polymerase II. Predicted to act upstream of or within regulation of transcription, DNA-templated. Predicted to be active in nucleus. Is expressed in central nervous system; chordo neural hinge; solid lens vesicle; and somite. Orthologous to human MKX (mohawk homeobox).

NR:

description
PREDICTED: homeobox protein Mohawk-like

GO:

id name namespace
GO:0006355 regulation of transcription, DNA-templated biological_process
GO:0005634 nucleus cellular_component
GO:0043565 sequence-specific DNA binding molecular_function
GO:0003700 DNA-binding transcription factor activity molecular_function

KEGG:

id description
K24890 MKX; homeobox protein Mohawk

RNA

RNA id representative length rna type GC content exon number start site end site
TU163295 False 401 lncRNA 0.29 1 8082900 8083300
TU163299 False 375 lncRNA 0.49 2 8083369 8083825
TU163302 False 418 TUCP 0.47 3 8090651 8092353
XM_043260482.1 True 1901 mRNA 0.45 7 8082906 8092455
XM_043260483.1 False 1856 mRNA 0.45 7 8082906 8092455

Neighbor

gene id symbol gene type direction distance location
LOC122360189 LOC107691296,LOC107550438,LOC107747520 coding downstream 8596 8067575 ~ 8074304 (-)
mib1 mib1,LOC107681781,LOC107708480,LOC107550435,LOC107747519 coding downstream 29715 8005718 ~ 8053185 (-)
gata6 gata6,LOC107681823,LOC107708510,LOC107747517,LOC107691181 coding downstream 98611 7977629 ~ 7984289 (-)
cables1 cables1,LOC107708521,LOC107747516,LOC107681774,LOC107691165 coding downstream 131815 7928529 ~ 7951085 (-)
sox4b sox4,LOC107732138,LOC107722246 coding downstream 690582 7388716 ~ 7392318 (-)
mpp7b LOC107681820 coding upstream 12771 8105226 ~ 8143954 (-)
adipoqb adipoqb,adipoq,LOC107681756,LOC107755695,LOC107566714,LOC100653481 coding upstream 102646 8195101 ~ 8200339 (-)
LOC122360799 tmtopsa,LOC107573386,LOC107550426,LOC107653523 coding upstream 146876 8239331 ~ 8256537 (-)
LOC122360914 snx10b,LOC107743219,LOC107596759,LOC107685610,LOC107684554,LOC107744712,LOC108441519 coding upstream 203571 8296026 ~ 8298481 (-)
LOC122360896 pde11al,LOC107743218,LOC107684552,LOC103364058 coding upstream 249145 8341600 ~ 8363640 (-)
LOC122360778 NA non-coding downstream 90033 7988950 ~ 7992867 (-)
LOC122360975 NA non-coding downstream 122525 7958881 ~ 7960375 (-)
G110449 LOC107708546,LOC107681784,LOC107691124,LOC107566457 non-coding downstream 178307 7849679 ~ 7904593 (-)
G110452 NA non-coding downstream 181892 7883932 ~ 7901008 (-)
G110453 LOC107681784,LOC107708546,LOC107747514,LOC107566457,LOC107691124 non-coding downstream 193605 7887795 ~ 7889295 (-)
G110546 NA non-coding upstream 142453 8234908 ~ 8235793 (-)
G110548 NA non-coding upstream 145303 8237758 ~ 8239176 (-)
G110753 NA non-coding upstream 455327 8547782 ~ 8551552 (-)
G110773 NA non-coding upstream 497443 8589898 ~ 8590634 (-)
G110807 NA non-coding upstream 753070 8845525 ~ 8845993 (-)
LOC122360680 LOC107749122,LOC107702023,LOC107751904,LOC107564882,LOC107661990,LOC107570991 other downstream 252150 7828215 ~ 7830750 (-)
cdkal1 cdkal1,LOC107722243,LOC107732137,LOC107663002 other downstream 464304 7441898 ~ 7618596 (-)
LOC122360222 nrsn1,LOC107730905,LOC107758834,LOC107558647,LOC107663792 other downstream 881519 7195490 ~ 7201381 (-)
G110303 NA other downstream 999376 7081962 ~ 7083524 (-)
LOC122359836 adamts16,LOC107757336,LOC107726256,LOC107689003,LOC107657842 other downstream 1743404 6279709 ~ 6339496 (-)
G110544 NA other upstream 123574 8216029 ~ 8216595 (-)
G110554 cbx3,LOC107596654,LOC107743152,LOC107744695,LOC107550827 other upstream 206334 8298789 ~ 8302245 (-)
G110556 NA other upstream 219810 8312265 ~ 8316685 (-)
wu:fj39g12 nppcl,LOC107744681,LOC107699924,LOC107749278,LOC107685603 other upstream 540895 8633350 ~ 8636222 (-)
G110911 LOC107749154,LOC107686954,LOC107596765,LOC108428931,LOC108268943,LOC107751895,LOC107656720 other upstream 1053475 9145930 ~ 9152183 (-)

Expression


Co-expression Network