G110546


Basic Information

Item Value
gene id G110546
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056714.1
NCBI id CM032083.1
chromosome length 28146790
location 8234908 ~ 8235793 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU163329
ggagattgttccagagtttaggtgctagataggaaaatgatctgccgcccgcagttgattttgatattctaggtattatcaaatggccagagttttgagaacgcagcggacgtgcaggactataatgtgataagagctcactcaagtattgaggagctaaaccattcagggctttataggtaattaataagattttaaaatctattcgatgtttgatagggagccagtgcagtgttgacagaaccaggctaatatgatcatacttcctagttctagtaaggactctggctgctgcgttttggactagctgaagtttgtttattaagcgtgcagaacaaccacccaataaagcattacaataatctaacctcgaggtcataaacacatgaattaatatttctgcattagaggttgaaagcataggtcgtaatttagatatatttttaagatggaaaaacgcagttttacagatgctagaaacatgatttttgaaggaaagattgcagtcaaacagcacacctaggttcctaactgatgatgaagaattaacagagcagccaagtgataggctgtgttctagattattatatgtggggtttttaggtccaattattagcacctctgttttttcagaatttaacattaagaagttactcatcatccagctttttatatcgactatgcattctgttagattctcaatttggtgtgtatcaccaggctgcgctgaaatatagagctgagtatcatcagcatagcagtgaaagctaacaccatgactcctgataatatctcccagaggtaacatgtacaggttgaaaagtaacggtcctagcactgagccttgaggaactccatatttcacttgtgattgatatgatacctc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU163329 True 886 lncRNA 0.38 1 8234908 8235793

Neighbor

gene id symbol gene type direction distance location
adipoqb adipoqb,adipoq,LOC107681756,LOC107755695,LOC107566714,LOC100653481 coding downstream 34569 8195101 ~ 8200339 (-)
mpp7b LOC107681820 coding downstream 90954 8105226 ~ 8143954 (-)
LOC122360189 LOC107691296,LOC107550438,LOC107747520 coding downstream 160604 8067575 ~ 8074304 (-)
mib1 mib1,LOC107681781,LOC107708480,LOC107550435,LOC107747519 coding downstream 181723 8005718 ~ 8053185 (-)
gata6 gata6,LOC107681823,LOC107708510,LOC107747517,LOC107691181 coding downstream 250619 7977629 ~ 7984289 (-)
LOC122360799 tmtopsa,LOC107573386,LOC107550426,LOC107653523 coding upstream 3538 8239331 ~ 8256537 (-)
LOC122360914 snx10b,LOC107743219,LOC107596759,LOC107685610,LOC107684554,LOC107744712,LOC108441519 coding upstream 60233 8296026 ~ 8298481 (-)
LOC122360896 pde11al,LOC107743218,LOC107684552,LOC103364058 coding upstream 105807 8341600 ~ 8363640 (-)
pals2a mpp6a,mpp6,LOC107749029,LOC107685533,LOC107596657,LOC107678134 coding upstream 198853 8434646 ~ 8451791 (-)
LOC122360915 NA coding upstream 217030 8452823 ~ 8453220 (-)
LOC122360778 NA non-coding downstream 242041 7988950 ~ 7992867 (-)
LOC122360975 NA non-coding downstream 274533 7958881 ~ 7960375 (-)
G110449 LOC107708546,LOC107681784,LOC107691124,LOC107566457 non-coding downstream 330315 7849679 ~ 7904593 (-)
G110452 NA non-coding downstream 333900 7883932 ~ 7901008 (-)
G110453 LOC107681784,LOC107708546,LOC107747514,LOC107566457,LOC107691124 non-coding downstream 345613 7887795 ~ 7889295 (-)
G110548 NA non-coding upstream 1965 8237758 ~ 8239176 (-)
G110753 NA non-coding upstream 311989 8547782 ~ 8551552 (-)
G110773 NA non-coding upstream 354105 8589898 ~ 8590634 (-)
G110807 NA non-coding upstream 609732 8845525 ~ 8845993 (-)
G110836 NA non-coding upstream 764994 9000787 ~ 9001428 (-)
G110544 NA other downstream 18313 8216029 ~ 8216595 (-)
mkxb mkxb,LOC107681765,LOC107566716,LOC107691300,LOC107550429,LOC107747522,LOC107708850 other downstream 142453 8082900 ~ 8092455 (-)
LOC122360680 LOC107749122,LOC107702023,LOC107751904,LOC107564882,LOC107661990,LOC107570991 other downstream 404158 7828215 ~ 7830750 (-)
cdkal1 cdkal1,LOC107722243,LOC107732137,LOC107663002 other downstream 616312 7441898 ~ 7618596 (-)
LOC122360222 nrsn1,LOC107730905,LOC107758834,LOC107558647,LOC107663792 other downstream 1033527 7195490 ~ 7201381 (-)
G110554 cbx3,LOC107596654,LOC107743152,LOC107744695,LOC107550827 other upstream 62996 8298789 ~ 8302245 (-)
G110556 NA other upstream 76472 8312265 ~ 8316685 (-)
wu:fj39g12 nppcl,LOC107744681,LOC107699924,LOC107749278,LOC107685603 other upstream 397557 8633350 ~ 8636222 (-)
G110911 LOC107749154,LOC107686954,LOC107596765,LOC108428931,LOC108268943,LOC107751895,LOC107656720 other upstream 910137 9145930 ~ 9152183 (-)
G110974 NA other upstream 1035178 9270971 ~ 9272605 (-)

Expression


Co-expression Network