G110753


Basic Information

Item Value
gene id G110753
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056714.1
NCBI id CM032083.1
chromosome length 28146790
location 8547782 ~ 8551552 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU163610
cggcatttaaatattttattgggggcattacattttttatggcCTTTTCTTAAAATCTGCGATCTGCATTGACTGAATTAGTTCTGTACTTAACTGTGATTCATTTAAACTACAgagttaaatgaaaaataagttactttttctgcatgcatttgctttttttggtaAACGGTGACGgtcatacagtacattttttcccccttttaaaAATTGTCTTTATATATTGCAGAAACACGTTgcaaagaaaaatgataaatatggcacaaaacacaaaatgctgAGAGCTTGTTTTGCGcaaacctgtaaaaaaaaaaaatgaaaaattcaagGTTCATTTAAGGTCTGTGCACCTTTCCTCTGATGTTGGAGTTCTAATTCAAGTTAAGTGATCTGAGTTAATTCTGAAACTACTGGAAACCATGTGCATACGCACATGTACAGTtgtcaacaaaacatttcatcataAGGTTTGCTTTTTCCACCTGATGTGGTTAAGTCATAGTCATTTTGCTACTTCAGGTACATGTAGGGTGTTGACTTTCACAGTAAAGaggattcaaaaacaaaacgctaatattttttgaacagtataaaatTGGATTAACTCAATTTTTGGATTATCCTCCAATCTTTATTTGCATCACAATATTGAATACAAAAAGACAGATGTTTAGTTCTTGTATCCTCTGCTGGCTCTGCGACCACGGGCACGCTCGAACTTCCTGCCTTTGGAGCGCACATAGGGTCTAGAAGACAGAGAAACACGCTTTtagtttaattctttttttgcaatgaataacatcaaacttaaaaaataaagtgcttctTGTTTCCTTACTTGGTATGGCTGTGGGGGGTTCCAGGAGCTTTGCCAAAATGCCTGTACACCTCTCTGGCCTTACGGGGcctgacagCAGAACGGTGCCCTGTCCTCTAGGTGCAGAAAGAGCCAGCTGGTCAAAGGTCATGATCTGTCCACCAGCCTTCAAGATCCTGCTACGAGCACGGTCGGTCAACTTGAGGGCACACACCTGGGAGAAAACTTCAATTTAGGGATCTTCAGAAGCCTTACATCATCAGTAATAGTTCCCACAACAACAGCAGTCAGGTTTTCACGGCCTGGAAGCTTCATCTTACGGCCAGTCGGGACAAGGCCAGAGGGGGTCGGTTGGTCTTGCTCATGAAGAGTCTCCTCAGAATGACCTTGTTGAAGGGAGCATCAGAACGGCGAGACAGGAATCTGTACAACTACTTGACCAAGAGCCGCAGGTAAATATCCTGACTTTTAGGCTCCTTCCTGTGAACCTTACGGTCCTTGTTGTGTCTGATGTCAACTCCCTTTTGGATCAAACAAAATCaattacacacaaataaaaatatataaaaataaaaaaacgtggAGCAGCGTCAGATTTATCATGTTCAGTGGACTACACT
>TU163615
cggcatttaaatattttattgggggcattacattttttatggcCTTTTCTTAAAATCTGCGATCTGCATTGACTGAATTAGTTCTGTACTTAACTGTGATTCATTTAAACTACAgagttaaatgaaaaataagttactttttctgcatgcatttgctttttttggtaAACGGTGACGgtcatacagtacattttttcccccttttaaaAATTGTCTTTATATATTGCAGAAACACGTTgcaaagaaaaatgataaatatggcacaaaacacaaaatgctgAGAGCTTGTTTTGCGcaaacctgtaaaaaaaaaaaatgaaaaattcaagGTTCATTTAAGGTCTGTGCACCTTTCCTCTGATGTTGGAGTTCTAATTCAAGTTAAGTGATCTGAGTTAATTCTGAAACTACTGGAAACCATGTGCATACGCACATGTACAGTtgtcaacaaaacatttcatcataAGGTTTGCTTTTTCCACCTGATGTGGTTAAGTCATAGTCATTTTGCTACTTCAGGTACATGTAGGGTGTTGACTTTCACAGTAAAGaggattcaaaaacaaaacgctaatattttttgaacagtataaaatTGGATTAACTCAATTTTTGGATTATCCTCCAATCTTTATTTGCATCACAATATTGAATACAAAAAGACAGATGTTTAGTTCTTGTATCCTCTGCTGGCTCTGCGACCACGGGCACGCTCGAACTTCCTGCCTTTGGAGCGCACATAGGTGCAGAAAGAGCCAGCTGGTCAAAGGTCATGATCTGTCCACCAGCCTTCAAGATCCTGCTACGAGCACGGTCGGTCAACTTGAGGGCACACCCTTCAATTTAGGGATCTTCAGAAGCCTTACATCATCAGTAATAGTTCCCACAACAACAGCAGTCAGGTTTTCACGGCCTGGAAGCTTCATCTTACGGATCTAGaagcaGTCGGGACAAGGCCAGAGGGGGTCGGTTGGTCTTGCTCATGAAGAGTCTCCTCAGAATGACCTTGTTGAAGGGAGCATCAGAACGGCGAGACAGGAATCTGTACAACTACTTGACCAAGAGCCGCAGGTAAATATCCTGACTTTTAGGCTCCTTCCTGTGAACCTTACGGTCCTTGTTGTGTCTGATGTCAACTCCCTTTTGGATCAAACAAAATCaattacacacaaataaaaatatataaaaataaaaaaacgtggAGCAGCGTCAGATTTATCATGTTCAGTGGACTACACT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU163610 True 1437 lncRNA 0.40 5 8547782 8551552
TU163615 False 1239 lncRNA 0.39 5 8547782 8551552

Neighbor

gene id symbol gene type direction distance location
LOC122360899 LOC107596664,LOC107748923,LOC107685526,LOC106957056 coding downstream 3505 8540602 ~ 8544277 (-)
uts2r3 si:dkey-27n14.1,LOC107685608,LOC107749301,LOC107596760,LOC107678125,LOC107550807 coding downstream 71934 8474098 ~ 8475848 (-)
LOC122360918 stk31,LOC107678124,LOC107685609 coding downstream 81688 8454966 ~ 8466094 (-)
LOC122360915 NA coding downstream 94562 8452823 ~ 8453220 (-)
pals2a mpp6a,mpp6,LOC107749029,LOC107685533,LOC107596657,LOC107678134 coding downstream 95991 8434646 ~ 8451791 (-)
plekhg6 LOC107748912,LOC107685524,LOC107596731,LOC107550787,LOC107744705 coding upstream 6784 8558336 ~ 8571473 (-)
tnfrsf1a LOC107685522,LOC107748890,LOC107596732 coding upstream 22475 8574027 ~ 8580269 (-)
si:dkey-260g12.1 NA coding upstream 40683 8592235 ~ 8600129 (-)
iffo1b iffo1b,LOC107685521,LOC107596667,LOC107748876,LOC107550819,LOC107744683,LOC107699931 coding upstream 49156 8600708 ~ 8617241 (-)
opn9 LOC107685604,LOC107699923,LOC107596762,LOC107550785,LOC107744717 coding upstream 66079 8617631 ~ 8625519 (-)
G110548 NA non-coding downstream 308606 8237758 ~ 8239176 (-)
G110546 NA non-coding downstream 311989 8234908 ~ 8235793 (-)
LOC122360778 NA non-coding downstream 554915 7988950 ~ 7992867 (-)
LOC122360975 NA non-coding downstream 587407 7958881 ~ 7960375 (-)
G110452 NA non-coding downstream 646774 7883932 ~ 7901008 (-)
G110773 NA non-coding upstream 38346 8589898 ~ 8590634 (-)
G110807 NA non-coding upstream 293973 8845525 ~ 8845993 (-)
G110836 NA non-coding upstream 449235 9000787 ~ 9001428 (-)
G110842 NA non-coding upstream 452986 9004538 ~ 9005206 (-)
G110849 NA non-coding upstream 455745 9007297 ~ 9007532 (-)
G110556 NA other downstream 231097 8312265 ~ 8316685 (-)
G110554 cbx3,LOC107596654,LOC107743152,LOC107744695,LOC107550827 other downstream 245537 8298789 ~ 8302245 (-)
G110544 NA other downstream 331187 8216029 ~ 8216595 (-)
mkxb mkxb,LOC107681765,LOC107566716,LOC107691300,LOC107550429,LOC107747522,LOC107708850 other downstream 455327 8082900 ~ 8092455 (-)
LOC122360680 LOC107749122,LOC107702023,LOC107751904,LOC107564882,LOC107661990,LOC107570991 other downstream 717032 7828215 ~ 7830750 (-)
wu:fj39g12 nppcl,LOC107744681,LOC107699924,LOC107749278,LOC107685603 other upstream 81798 8633350 ~ 8636222 (-)
G110911 LOC107749154,LOC107686954,LOC107596765,LOC108428931,LOC108268943,LOC107751895,LOC107656720 other upstream 594378 9145930 ~ 9152183 (-)
G110974 NA other upstream 719419 9270971 ~ 9272605 (-)
gask1a fam198a,LOC107732434,LOC107657576,LOC107751903,LOC107704082 other upstream 1325659 9877211 ~ 9902981 (-)
LOC122361037 cables1,LOC107708521,LOC107747516,LOC107681774,LOC107691165 other upstream 2194024 10745576 ~ 10764305 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
rainbow trout (Oncorhynchus mykiss) G106551 NA non-coding NC_048566.1 CM023220.2 3604546 ~ 3605227 (+)
mexican tetra (Astyanax mexicanus) G89624 rpl18 non-coding NC_035906.1 CM008309.1 10089884 ~ 10453879 (+)