wu:fj39g12 (nppcl,LOC107744681,LOC107699924,LOC107749278,LOC107685603)


Basic Information

Item Value
gene id wu:fj39g12
gene name nppcl,LOC107744681,LOC107699924,LOC107749278,LOC107685603
gene type misc
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056714.1
NCBI id CM032083.1
chromosome length 28146790
location 8633350 ~ 8636222 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU163623
ggatggatgaggaatgaaaaaaaaaaggaagggtGAGATCATGTAAAGCAGACAACACCTGGTTTCGGCGCCCCGAGTTTGTGTCACGACTTCTTTCGGGGTGTGCGTGGATATGATGTCATATTCCAGGCAGAAGGTGGCATCCCCTCGACAACATCAAACAACCCCCCCCACCACCACCCATGCCTCTGACATCATCTCGGAGACGTCGAGATAATAAGGTGCGagagtgaaggagagagagaaaagggatGGAAAAGAGGTGTGTGTTGTGGAAGGGGGGACTTGTAAAGCATATATAGACACCTCATCCTTAGCATTAACATACTCATCCggctcactcaaacacacactcgcttTAAATCACATCCCTGCGCACAGAGGGAGGAAGACAGCGGAGAGGGAAAGACAGGGATGCTCTTAGCAGGTGCCAAAAACTGAgtcgagagagaaagagggatgGAGGACTAAAGCGTTCAGTCTGGTTTTAAAAGCTCCTCGAACTATTATTGAGGTGTATTCGGGATCAACATCGCTTGCACCATGCTGTGCTCCTCTGTATTTGTGGGGCTCCTAGTTCTCCTGGCCAATCCGGTGCCGGGCCACACCCGAACCCTTCACGCCCCTGACAAAGCCATGCAGGTCATCGAGCAGTTCCTCGAGCGCTACAATGACCTTTTGACCCTTGATGATCTTGAGAACCTCACGAGCGACCAATCGGAAGAGCCCATGCAGACCTTCAGCTCTGGGCTAAAGGTGGCAGAATACCCCAAGTGGATTGACATACCTGTGCAGAGAGAGAACGCCTGGCTCCGCCTCTTAAAGGGGGCTTTGGCCAATCAGAAGCGAGCTCCACCGGACCGGTTGCGGAGGGGTTGGAACCGAGGCTGTTTTGGTCTGAAACTGGACCGGATCGGTTCTATGAGCGGCCTCGGCTGCTAATAATGAACTGAGAGGTGGACCGAGACGATGAGACGACTGTTAGCTTTAGGTATAGGTCTGGTTTGGGACTCATCATATTGTGTatttcaatataattatttttacatgggATTTGAAGTGACATGTCTTttaactgtatttgtatttatttcttaacgAAGGTAGTAGTGTTTCTGGTTCcttgagatgtagatgagatacAATCATTTTGATAATCTGCTAGTAGCTTACTAGTAAGTGAAGATCTTAAAGTAACGTCTCAAATAGTCTcaaaatgcatgatttataGAACTTATACTGCTCACCTTCTGTAGTTTTTGCATGaataaaatttcctccatgtcatggttctttttgctttttgcatGTCTCTTCATTCTGACGCCATCAAGGGTTTATCACACTTTTCTAAACCTAGGTGTCCCAGGTGCTTTTCTAAATCGGTGTGTTCTCCCACACACTGCAAATCAAGGAGTTCTTGGGCTGATATGCAAATGGTAGaatgtgacagaattttcacgGCCTTAATCAGCTCCCTTTGAACAAAGACACGAAGGCTGACACACATCCACATCCTTCTGCGATGAGAAGTGGGCAGTCTGGGATAAGTGAGGTTTACGTGCAGGGTTTTTAGTTGCTTGAGGAACTTGATAATTGCTCATttgctgaaatataaatgaatttaaacagCATCACTCTacagaaatgtttcttcttCTAAAGCAGAGAAGGAACATGCATCCACTACCATTTAATCGTTTGGGAACGGCGTCAAAATCCCGTTATTTCTTACCACTCAATCATCCTGTGAAATGTTTATGTAGGCGTTGGGATTATAgcttgtatgaaaaaaaaaatcatactatGTTTAGGCACAAAATCTTACCTTGAACTACATTTTATAGAACAGATATTCTCTCTAAGAActgatgattttattaaaaaaaaaaattggtaaaTTAGTCTGTTATGATCTACagtataatttcatttaaaagtaagaGAAACGATAATTAATTAACtgttaaactgaataaaaa
>XM_043260322.1
GAGATAATAAGGTGCGagagtgaaggagagagagaaaagggatGGAAAAGAGGTGTGTGTTGTGGAAGGGGGGACTTGTAAAGCATATATAGACACCTCATCCTTAGCATTAACATACTCATCCggctcactcaaacacacactcgcttTAAATCACATCCCTGCGCACAGAGGGAGGAAGACAGCGGAGAGGGAAAGACAGGGATGCTCTTAGCAGGTGCCAAAAACTGAgtcgagagagaaagagggatgGAGGACTAAAGCGTTCAGTCTGGTTTTAAAAGCTCCTCGAACTATTATTGAGGTGTATTCGGGATCAACATCGCTTGCACCATGCTGTGCTCCTCTGTATTTGTGGGGCTCCTAGTTCTCCTGGCCAATCCGGTGCCGGGCCACACCCGAACCCTTCACGCCCCTGACAAAGCCATGCAGGTCATCGAGCAGTTCCTCGAGCGCTACAATGACCTTTTGACCCTTGATGATCTTGAGAACCTCACGAGCGACCAATCGGAAGAGCCCATGCAGACCTTCAGCTCTGGGCTAAAGGTGGCAGAATACCCCAAGTGGATTGACATACCTGTGCAGAGAGAGAACGCCTGGCTCCGCCTCTTAAAGGGGGCTTTGGCCAATCAGAAGCGAGCTCCACCGGACCGGTTGCGGAGGGGTTGGAACCGAGGCTGTTTTGGTCTGAAACTGGACCGGATCGGTTCTATGAGCGGCCTCGGCTGCTAATAATGAACTGAGAGGTGGACCGAGACGATGAGACGACTGTTAGCTTTAGGTATAGGTCTGGTTTGGGACTCATCATATTGTGTatttcaatataattatttttacatgggATTTGAAGTGACATGTCTTttaactgtatttgtatttatttcttaacgAAGGTAGTAGTGTTTCTGGTTCcttgagatgtagatgagatacAATCATTTTGATAATCTGCTAGTAGCTTACTAGTAAGTGAAGATCTTAAAGTAACGTCTCAAATAGTCTcaaaatgcatgatttataGAACTTATACTGCTCACCTTCTGTAGTTTTTGCATGaataaaatttcctccatgtcatggtt
>XM_043260323.1
GTCGAGATAATAAGGTGCGagagtgaaggagagagagaaaagggatGGAAAAGAGGTGTGTGTTGTGGAAGGGGGGACTTGTAAAGCATATATAGACACCTCATCCTTAGCATTAACATACTCATCCggctcactcaaacacacactcgcttTAAATCACATCCCTGCGCACAGAGGGAGGAAGACAGCGGAGAGGGAAAGACAGGGATGCTCTTAGCAGGTGCCAAAAACTGAgtcgagagagaaagagggatgGAGGACTAAAGCGTTCAGTCTGGTTTTAAAAGCTCCTCGAACTATTATTGAATGTAGTTTTCTGTTTGTATTTCCATGCTTCTCTCTCCTTTATCTGTGTTCATCTAAATCTGTTCATCTAAATCTATCCATACCGACCCCGCATTAGAGGTGTATTCGGGATCAACATCGCTTGCACCATGCTGTGCTCCTCTGTATTTGTGGGGCTCCTAGTTCTCCTGGCCAATCCGGTGCCGGGCCACACCCGAACCCTTCACGCCCCTGACAAAGCCATGCAGGTCATCGAGCAGTTCCTCGAGCGCTACAATGACCTTTTGACCCTTGATGATCTTGAGAACCTCACGAGCGACCAATCGGAAGAGCCCATGCAGACCTTCAGCTCTGGGCTAAAGGTGGCAGAATACCCCAAGTGGATTGACATACCTGTGCAGAGAGAGAACGCCTGGCTCCGCCTCTTAAAGGGGGCTTTGGCCAATCAGAAGCGAGCTCCACCGGACCGGTTGCGGAGGGGTTGGAACCGAGGCTGTTTTGGTCTGAAACTGGACCGGATCGGTTCTATGAGCGGCCTCGGCTGCTAATAATGAACTGAGAGGTGGACCGAGACGATGAGACGACTGTTAGCTTTAGGTATAGGTCTGGTTTGGGACTCATCATATTGTGTatttcaatataattatttttacatgggATTTGAAGTGACATGTCTTttaactgtatttgtatttatttcttaacgAAGGTAGTAGTGTTTCTGGTTCcttgagatgtagatgagatacAATCATTTTGATAATCTGCTAGTAGCTTACTAGTAAGTGAAGATCTTAAAGTAACGTCTCAAATAGTCTcaaaatgcatgatttataGAACTTATACTGCTCACCTTCTGTAGTTTTTGCATGaataaaatttcctccatgtcatggtt

Function

NR:

description
C-type natriuretic peptide 1 precursor

GO:

id name namespace
GO:0006182 cGMP biosynthetic process biological_process
GO:0007168 receptor guanylyl cyclase signaling pathway biological_process
GO:0005576 extracellular region cellular_component
GO:0005179 hormone activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU163623 True 1982 TUCP 0.43 3 8633350 8636222
XM_043260322.1 False 1082 mRNA 0.46 3 8634040 8636012
XM_043260323.1 False 1183 mRNA 0.46 3 8634040 8636015

Neighbor

gene id symbol gene type direction distance location
gapdh gapdh,LOC107596669 coding downstream 3172 8625617 ~ 8630178 (-)
opn9 LOC107685604,LOC107699923,LOC107596762,LOC107550785,LOC107744717 coding downstream 7831 8617631 ~ 8625519 (-)
iffo1b iffo1b,LOC107685521,LOC107596667,LOC107748876,LOC107550819,LOC107744683,LOC107699931 coding downstream 16109 8600708 ~ 8617241 (-)
si:dkey-260g12.1 NA coding downstream 33221 8592235 ~ 8600129 (-)
tnfrsf1a LOC107685522,LOC107748890,LOC107596732 coding downstream 53081 8574027 ~ 8580269 (-)
nop2 nop2,LOC107685519,LOC107699935,LOC107749104,LOC104957145 coding upstream 6936 8643158 ~ 8649731 (-)
LOC122361375 NA coding upstream 11192 8647414 ~ 8647555 (-)
emg1 emg1,LOC107748869,LOC107748863,LOC107699927,LOC107744679 coding upstream 15734 8651956 ~ 8653563 (-)
kel LOC107569991,LOC107744677,LOC107699936 coding upstream 17611 8653833 ~ 8664175 (-)
zyx zyx,LOC107748852,LOC107569995,LOC107699937,LOC107596670 coding upstream 28344 8664566 ~ 8680965 (-)
G110773 NA non-coding downstream 42716 8589898 ~ 8590634 (-)
G110753 NA non-coding downstream 81798 8547782 ~ 8551552 (-)
G110548 NA non-coding downstream 394174 8237758 ~ 8239176 (-)
G110546 NA non-coding downstream 397557 8234908 ~ 8235793 (-)
LOC122360778 NA non-coding downstream 640483 7988950 ~ 7992867 (-)
G110807 NA non-coding upstream 209303 8845525 ~ 8845993 (-)
G110836 NA non-coding upstream 364565 9000787 ~ 9001428 (-)
G110842 NA non-coding upstream 368316 9004538 ~ 9005206 (-)
G110849 NA non-coding upstream 371075 9007297 ~ 9007532 (-)
G110852 NA non-coding upstream 394913 9031135 ~ 9031449 (-)
G110556 NA other downstream 316665 8312265 ~ 8316685 (-)
G110554 cbx3,LOC107596654,LOC107743152,LOC107744695,LOC107550827 other downstream 331105 8298789 ~ 8302245 (-)
G110544 NA other downstream 416755 8216029 ~ 8216595 (-)
mkxb mkxb,LOC107681765,LOC107566716,LOC107691300,LOC107550429,LOC107747522,LOC107708850 other downstream 540895 8082900 ~ 8092455 (-)
LOC122360680 LOC107749122,LOC107702023,LOC107751904,LOC107564882,LOC107661990,LOC107570991 other downstream 802600 7828215 ~ 7830750 (-)
G110911 LOC107749154,LOC107686954,LOC107596765,LOC108428931,LOC108268943,LOC107751895,LOC107656720 other upstream 509708 9145930 ~ 9152183 (-)
G110974 NA other upstream 634749 9270971 ~ 9272605 (-)
gask1a fam198a,LOC107732434,LOC107657576,LOC107751903,LOC107704082 other upstream 1240989 9877211 ~ 9902981 (-)
LOC122361037 cables1,LOC107708521,LOC107747516,LOC107681774,LOC107691165 other upstream 2109354 10745576 ~ 10764305 (-)
LOC122360812 cobl,LOC107746964,LOC107684220,LOC107551210 other upstream 2221298 10857520 ~ 10883424 (-)

Expression


Co-expression Network