G110911 (LOC107749154,LOC107686954,LOC107596765,LOC108428931,LOC108268943,LOC107751895,LOC107656720)


Basic Information

Item Value
gene id G110911
gene name LOC107749154,LOC107686954,LOC107596765,LOC108428931,LOC108268943,LOC107751895,LOC107656720
gene type unknown
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056714.1
NCBI id CM032083.1
chromosome length 28146790
location 9145930 ~ 9152183 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU163829
ggTGTTTATGCGTTTGGATTTCTGTCAATGGTTCCTCAGTTATTCATCAACTATAAGTTAAAATCGGTGGCCCATCTGCAGGTGTCCATTTTTATGTATAAGGGCTTGAACACATTTATCAGTGACATGTTCAGTGGAGTAATAACCACTCCTGGACCCCATCAGTTGGCGTGTTTCAGAGATGATGTGGTCTTCCTCATCTACCTTTATCAGCGCAGGATTTACCCGGTGAACAAGGCCAGGTCACGTGATTACGGGGCACTGCACAGGAAGAAACCCAAAGGAAAGCCACACGAAGACTAACCCTCCGAAGAGTTCTCTGCTTGCGCTCTCCATGCATGCAATACAGGAGAAACGTTACGGAAACTAAAGAAGGGCATTACGGCCGCTGGACGTTCTCTTTGTGTATCCTTGTAATGAGCCTGCCTCCTGCTGTCTGCTGCGACATCCGACAGAGCTGCACGTACAGTACACTCGCGTCCACTCGAACAAGCCAGACCTGAAGGGATCAGCAGCGCACACCTGCTTTAGACTAAATCCGTGTGTAATATTCACTCAGGCCGATCCAACCGACAGTTAGAAAGCGACGTAAGCTCTGAAGGAAACTACAGCGACGCCCACCTGTGCTTTTATAACCTTTGAATTGAATGACTGCAATGCAATACCTACGACCACCGCATCTACGTTACCGTTTTCAAACATTCCGATTTAACGGCCGCTTGCTGTTTTTGAACGGAAAAGCACTTTCCACGGATTCGGAAAGATATTTCGAGTTAGCCGCTTTGCATTTATTTCCGTTTCGCACTTAAGCGGGAAACGACTAACTTTTGTCACGTGCACTATTTGGTCTTGTTTATTACAAAAGCATCATTTTTCTTGAAAACACAACGCCTGTTTGACCATGCCCGGGTTTCTTTTGTCtcctaaaacatgttttaattaaagtttgacGATACAAGTTTAttccttctggctttttttcGCCTTGTTGCCATTAAACAATGCACGGAACTACTCTAAGACAAAACTGAGGTGATTATATCTTTTGTTTTGCCAGTTTCACCCATTAGTGGAAGCAATCTAACCCGTCCGTCTGGAATCGGGGAGGACGGAACACGACGTGAATACGTGTAGCTAAACGGCGACTACGATGGTGGCATCGGTTGAGCGAAAAAACAAACCGAGTTTTTTGCTTTTAACCTTTTTCAGGCAGAAGTGAAGGAATGTCTGCTGGGTGGATCTTTGAGAAGACAGTGAGTTTCAGTCTGTGAACTCTCCCACACGTGCAGTCAGTCGGCGCTTCAGCAGCATGGAGACTCTTTCTAGTCTGCTCTTTTTACTTCTAACCGTACACTCAGttaaTGGCCTAAAGTGTTACGTGTGTGCCTCGGCGACAACGAATCAAGAATGTAACAAAAACCTTCAGGAATGTCAGTCTCCTCTGGACACCTGCATGACCACTGTAGGCACGCTAGGAGGAGTTTCCGCCATCGCGAAGACGTGCTCCATGTCAAAGCTGTGCACCAGCGCCGCGGCCATCGCCTCTGTGGACAGTAATGGAAACGGCATGCAGGTGACGTGCTGTAACGGTAATCTGTGCAACTACAGCGGAGCTTCCAGCGTCACGCTGCACAGATGGCTGCTGGTGCTGCCGCTGCTCCTCATCAGCCTCCTCTTCAGACAGCACGCTTGAAGACTTCAAACACTTCATCCCGGCACGGACTAAAACGCTCGTCTTATCGAAAATTCTACCGCGCTAACTTCCCTTGTTTGGTAACGGACGTTTGATTTGAAAAGTACAATCTGTTAAACAGATTACGTGTCCCGGAAATGCAGTTATGTAAAAACCTTTGAAGGAAGAATTGCACGGTCCTGTGTTAACTAGAGGATATCATCAAATTATGAGAGCGTTGCGCATGAATTTAAGCCATATGTATGTTGTTAGACAGgggtatatttaaaatgttttaattcttttcccccctcttttacttttaatgcaaatgaatatta

Function

NR:

description
PREDICTED: cleft lip and palate transmembrane protein 1-like protein

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU163829 True 2013 TUCP 0.46 7 9145930 9152183

Neighbor

gene id symbol gene type direction distance location
ptpn2a LOC107748621,LOC107656702,LOC107686952 coding downstream 27812 9112262 ~ 9118118 (-)
cep76 cep76,LOC107684173 coding downstream 35175 9103514 ~ 9110755 (-)
id4 id4,LOC107656716,LOC107748665,LOC107751915,LOC107596695,LOC107684172,LOC107564867 coding downstream 116224 9026980 ~ 9029706 (-)
ncalda ncalda,ncald,LOC100692199,LOC105901278,LOC106931336,LOC103042493,LOC108268956 coding downstream 148944 8961054 ~ 8996986 (-)
grhl2a grhl2a,LOC107748679,LOC107564858,LOC107684167,LOC107596692,LOC107741979,LOC107656701 coding downstream 188480 8946171 ~ 8957450 (-)
cmtm8b LOC107749122,LOC107702023,LOC107564882,LOC107751904,LOC107661990,LOC107570991 coding upstream 167372 9319555 ~ 9322529 (-)
ulk4 ulk4,LOC107723070,LOC107704090,LOC107570990,LOC107668185,LOC107657572,LOC107564876,LOC107573651 coding upstream 235327 9387510 ~ 9523997 (-)
ccka LOC107751914,LOC107704089,LOC107601665,LOC107657574 coding upstream 475063 9627246 ~ 9629046 (-)
trim71 trim71,LOC107751884,LOC107601676,LOC107704101,LOC107657583,LOC107723073,LOC107551222 coding upstream 526040 9678223 ~ 9702267 (-)
tcaim tcaim,LOC107657582,LOC107723074,LOC107751885,LOC107601675,LOC107704100 coding upstream 553657 9705840 ~ 9714651 (-)
G110852 NA non-coding downstream 114481 9031135 ~ 9031449 (-)
G110849 NA non-coding downstream 138398 9007297 ~ 9007532 (-)
G110842 NA non-coding downstream 140724 9004538 ~ 9005206 (-)
G110836 NA non-coding downstream 144502 9000787 ~ 9001428 (-)
G110807 NA non-coding downstream 299937 8845525 ~ 8845993 (-)
G111005 NA non-coding upstream 233996 9386179 ~ 9387391 (-)
G111021 LOC102788557 non-coding upstream 447749 9599932 ~ 9607073 (-)
G111024 NA non-coding upstream 467936 9620119 ~ 9620453 (-)
G111025 NA non-coding upstream 471517 9623700 ~ 9624119 (-)
G111045 NA non-coding upstream 522681 9674864 ~ 9676505 (-)
wu:fj39g12 nppcl,LOC107744681,LOC107699924,LOC107749278,LOC107685603 other downstream 509708 8633350 ~ 8636222 (-)
G110556 NA other downstream 829245 8312265 ~ 8316685 (-)
G110554 cbx3,LOC107596654,LOC107743152,LOC107744695,LOC107550827 other downstream 843685 8298789 ~ 8302245 (-)
G110544 NA other downstream 929335 8216029 ~ 8216595 (-)
mkxb mkxb,LOC107681765,LOC107566716,LOC107691300,LOC107550429,LOC107747522,LOC107708850 other downstream 1053475 8082900 ~ 8092455 (-)
G110974 NA other upstream 118788 9270971 ~ 9272605 (-)
gask1a fam198a,LOC107732434,LOC107657576,LOC107751903,LOC107704082 other upstream 725028 9877211 ~ 9902981 (-)
LOC122361037 cables1,LOC107708521,LOC107747516,LOC107681774,LOC107691165 other upstream 1593393 10745576 ~ 10764305 (-)
LOC122360812 cobl,LOC107746964,LOC107684220,LOC107551210 other upstream 1705337 10857520 ~ 10883424 (-)
G111450 mal2,LOC107757438,LOC107571097,LOC107677950,LOC107738940 other upstream 2117437 11269620 ~ 11286432 (-)

Expression


Co-expression Network