G111048


Basic Information

Item Value
gene id G111048
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056714.1
NCBI id CM032083.1
chromosome length 28146790
location 9754315 ~ 9754980 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU164002
CCCTCGAGTCCTCACTCTGATACAGGAACTCTCTGATCACGAGTGGCGTTAAGCCAAAATATGGACTCTTTCTGTGGACTCTGACTCTTTGTTTGAGAAGAGGTACTGTTAGTTTTCACTGTTAAATTCACAAtgtgtattatgtttattaaagcactataattttttttaagtcttaaaggtacactaactttttctctgtttgtttgagaagAGGTACTGTTAGTTTTCACTGTTAAATTCACAAtgtgtattatgtttattaaagcactatataattttttttttttacgtcttAAAAGTGCACCTAACTTTTCTGGTAGTGAGTCCACCACCTGCTTGTTTCATGAAGATGTTATTTCTTTGGGGGAATGTTTTACAATATGGTATAAAACTTTATCTATcttgcatttattcaattataacactttttttattgcaaaaaatacCTTACCAAACGTGAGGGGGCTCGCCTGTAGATCTGACCTGTAACTTGGCCTTTTGGCATCACCTGATTGTCTCCATGGAGATAGATAAATTTTATGCCATACTGTGGAACATTCCAGACAAGGAGAGTGTGGGTTGTTGTTGTGTGCCTGGCACGTAAACTTTGAACTTGTTTGAAGAAAAATTCATCCAGTTGTTTACAACTATTGACGAtggctg

Function

GO:

id name namespace
GO:0004197 cysteine-type endopeptidase activity molecular_function
GO:0008233 peptidase activity molecular_function
GO:0008234 cysteine-type peptidase activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU164002 True 666 lncRNA 0.36 1 9754315 9754980

Neighbor

gene id symbol gene type direction distance location
tcaim tcaim,LOC107657582,LOC107723074,LOC107751885,LOC107601675,LOC107704100 coding downstream 39664 9705840 ~ 9714651 (-)
trim71 trim71,LOC107751884,LOC107601676,LOC107704101,LOC107657583,LOC107723073,LOC107551222 coding downstream 52048 9678223 ~ 9702267 (-)
ccka LOC107751914,LOC107704089,LOC107601665,LOC107657574 coding downstream 125269 9627246 ~ 9629046 (-)
ulk4 ulk4,LOC107723070,LOC107704090,LOC107570990,LOC107668185,LOC107657572,LOC107564876,LOC107573651 coding downstream 230318 9387510 ~ 9523997 (-)
cmtm8b LOC107749122,LOC107702023,LOC107564882,LOC107751904,LOC107661990,LOC107570991 coding downstream 431786 9319555 ~ 9322529 (-)
abhd5a abhd5,abhd5a,LOC107657580,LOC107751913,LOC107704099,LOC107723076 coding upstream 23337 9778317 ~ 9787092 (-)
snrka snrka,snrk,LOC107723077,LOC107551216,LOC107657578,LOC107601674,LOC107704097,LOC107751880 coding upstream 63606 9818586 ~ 9858631 (-)
entpd3 entpd3,LOC107732432,LOC107657573,LOC107751912,LOC107704086 coding upstream 149493 9904473 ~ 9914342 (-)
ddc ddc,LOC107551213,LOC107746968,LOC107601670,LOC107751878,LOC106605416 coding upstream 174356 9929336 ~ 9945606 (-)
grb10b grb10b,LOC107746967,LOC107551212,LOC107751877,LOC107601668,LOC107704094 coding upstream 192371 9947351 ~ 10010750 (-)
G111045 NA non-coding downstream 77810 9674864 ~ 9676505 (-)
G111025 NA non-coding downstream 130196 9623700 ~ 9624119 (-)
G111024 NA non-coding downstream 133862 9620119 ~ 9620453 (-)
G111021 LOC102788557 non-coding downstream 147242 9599932 ~ 9607073 (-)
G111005 NA non-coding downstream 366924 9386179 ~ 9387391 (-)
G111097 NA non-coding upstream 120412 9875392 ~ 9875664 (-)
G111298 NA non-coding upstream 975188 10730168 ~ 10730415 (-)
G111329 triob,LOC107746974,LOC107551199,LOC107684227,LOC107601652,LOC107751902 non-coding upstream 1036584 10791564 ~ 10793616 (-)
LOC122361039 NA non-coding upstream 1169135 10924115 ~ 10924764 (-)
G111393 NA non-coding upstream 1404859 11159839 ~ 11160056 (-)
G110974 NA other downstream 481710 9270971 ~ 9272605 (-)
G110911 LOC107749154,LOC107686954,LOC107596765,LOC108428931,LOC108268943,LOC107751895,LOC107656720 other downstream 602132 9145930 ~ 9152183 (-)
wu:fj39g12 nppcl,LOC107744681,LOC107699924,LOC107749278,LOC107685603 other downstream 1118093 8633350 ~ 8636222 (-)
G110556 NA other downstream 1437630 8312265 ~ 8316685 (-)
G110554 cbx3,LOC107596654,LOC107743152,LOC107744695,LOC107550827 other downstream 1452070 8298789 ~ 8302245 (-)
gask1a fam198a,LOC107732434,LOC107657576,LOC107751903,LOC107704082 other upstream 122231 9877211 ~ 9902981 (-)
LOC122361037 cables1,LOC107708521,LOC107747516,LOC107681774,LOC107691165 other upstream 990596 10745576 ~ 10764305 (-)
LOC122360812 cobl,LOC107746964,LOC107684220,LOC107551210 other upstream 1102540 10857520 ~ 10883424 (-)
G111450 mal2,LOC107757438,LOC107571097,LOC107677950,LOC107738940 other upstream 1514640 11269620 ~ 11286432 (-)
LOC122360600 enpp2,LOC107757440,LOC107745056,LOC107697648,LOC107574906,LOC107681346 other upstream 1578195 11333175 ~ 11386993 (-)

Expression


Co-expression Network