LOC122361049 (c16h2orf66,LOC107743229)


Basic Information

Item Value
gene id LOC122361049
gene name c16h2orf66,LOC107743229
gene type misc
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056714.1
NCBI id CM032083.1
chromosome length 28146790
location 11865680 ~ 11867315 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU164803
GCAAATTGTTCATGTATGGCATGCCTCTTATGCAGTGTATAAAAAGCAGGGGCAGAAAGCTTTTGGGAAACCGAGGCAACCCGACTGCAAGCTGACCCGGCACTCACAGACGCTGCAGACATGTTGACGGTATTGGCTCTGATGACGCTGCTGATGGTCTCGGTTGAGTCGGACCTCTCAAATGAAGAGTGGAAGTCTCTGAGCAACCCACAGAGCAGGACCCTGtttttccGGATCCTACAGTCCTATCTTGAAGGCAGAGAGAGTGAAGCTCAAGCCATGAACAGGAAAACGAGTGTGAAggagaacaaaaacagcaatgtgGAAAATATTGGTTATGACAAGTACGATCTCTTTCTTCACAATGACATTTATGATGTTTAGTTGAAGAGTTCACTTTTAGTTTGACCGTGTCTAACATGTTAAATGGGTATTAGATCTAATAGCTTGAGAAATGTTCATGCTTGTAACAACTGAccaatttttctaaatatatttctcttctaatatgttttctgttataaatgttttacaaaagtacaaaaaacaaCTAGTCGATGAAAGCTAAACGTGTCATTTTGTGTTTACACGCAAGTAATAAAATTGTGTATTGCTTATTTCAAAAGTAGAATTCCTCTATAGTtgaaattgtttatttgtttactaaataaataagtatgGAAACAgtggaatgaaaatgaaa
>XM_043261989.1
GCAAATTGTTCATGTATGGCATGCCTCTTATGCAGTGTATAAAAAGCAGGGGCAGAAAGCTTTTGGGAAACCGAGGCAACCCGACTGCAAGCTGACCCGGCACTCACAGACGCTGCAGACATGTTGACGGTATTGGCTCTGATGACGCTGCTGATGGTCTCGGTTGAGTCGGACCTCTCAAATGAAGAGTGGAAGTCTCTGAGCAACCCACAGAGCAGGACCCTGtttttccGGATCCTACAGTCCTATCTTGAAGGCAGAGAGAGTGAAGCTCAAGCCATGAACAGGAAAACGAGTGTGAAggagaacaaaaacagcaatgtgGAAAATATTGGTTATGACAAGTACGATCTCTTTCTTCACAATGACATTTATGATGTTTAGTTGAAGAGTTCACTTTTAGTTTGACCGTGTCTAACATGTTAAATGGGTATTAGATCTAATAGCTTGAGAAATGTTCATGCTTGTAACAACTGAccaatttttctaaatatatttctcttctaatatgttttctgttataaatgttttacaaaagtacaaaaaacaaCTAGTCGATGAAAGCTAAACGTGTCATTTTGTGTTTACACGCAAGTAATAAAATTGTGTATTGCTTATTTCAAAAGTAGAATTCCTCTATAGTtgaaattgtttatttgtttactaaataaataagtatgGAAACAgtggaatgaaaatgaaa

Function

NR:

description
PREDICTED: uncharacterized protein C2orf66 homolog

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU164803 False 703 lncRNA 0.38 3 11865680 11867315
XM_043261989.1 True 703 mRNA 0.38 3 11865680 11867315

Neighbor

gene id symbol gene type direction distance location
hacl1 hacl1,LOC107743162,LOC107685543,LOC107745383,LOC107684560 coding downstream 497 11855021 ~ 11865183 (-)
colq colq,LOC107743227,LOC107745382,LOC107684559,LOC107685587 coding downstream 10686 11839901 ~ 11854994 (-)
fkbp14 fkbp14,LOC107596753,LOC107743226,LOC107685615,LOC107550815,LOC107745381 coding downstream 42129 11820787 ~ 11823551 (-)
cpvl cpvl,LOC107743225,LOC107684544,LOC107745375,LOC107550833,LOC107685540,LOC107596754 coding downstream 85700 11774974 ~ 11779980 (-)
jazf1b jazf1,LOC572950,LOC107743157,LOC108441515,LOC107684540,LOC107550831,LOC107685586 coding downstream 160852 11687295 ~ 11704828 (-)
ankrd28b ankrd44,ankrd28b,LOC107685545,LOC107745379,LOC107550837,LOC107596646,LOC107684548 coding upstream 1883 11869198 ~ 11885649 (-)
twist1b twist1b,twist1,LOC107684561,LOC107596643,LOC107728521,LOC107550839 coding upstream 118319 11985634 ~ 11987450 (-)
tmem196b tmem196b,LOC107596721,LOC107685588,LOC107728522,LOC107684562,LOC107550817 coding upstream 132255 11999570 ~ 12000907 (-)
macc1 LOC107743168,LOC107685548,LOC107596642,LOC107728525,LOC107684550,LOC107550840 coding upstream 140142 12007457 ~ 12012944 (-)
sp8b sp8b,LOC107685617,LOC107596752,LOC107728520,LOC107743231,LOC107684564,LOC101158882 coding upstream 168592 12035907 ~ 12040947 (-)
G111639 NA non-coding downstream 45902 11818459 ~ 11819778 (-)
LOC122360397 NA non-coding downstream 81346 11783695 ~ 11784334 (-)
G111625 NA non-coding downstream 84508 11780787 ~ 11781172 (-)
G111623 NA non-coding downstream 91499 11773919 ~ 11774181 (-)
G111559 NA non-coding downstream 199406 11662918 ~ 11666274 (-)
G111661 NA non-coding upstream 75049 11942364 ~ 11943955 (-)
G111668 NA non-coding upstream 116064 11983379 ~ 11983646 (-)
G111680 NA non-coding upstream 165278 12032593 ~ 12035126 (-)
G111688 NA non-coding upstream 208282 12075597 ~ 12076159 (-)
G111689 NA non-coding upstream 209138 12076453 ~ 12077007 (-)
G111490 si:dkey-12j5.1,LOC107738871,LOC107549224,LOC107689883,LOC107717803,LOC108256403,LOC108426361,LOC107593733 other downstream 453903 11410678 ~ 11411777 (-)
LOC122360600 enpp2,LOC107757440,LOC107745056,LOC107697648,LOC107574906,LOC107681346 other downstream 478687 11333175 ~ 11386993 (-)
G111450 mal2,LOC107757438,LOC107571097,LOC107677950,LOC107738940 other downstream 579248 11269620 ~ 11286432 (-)
LOC122360812 cobl,LOC107746964,LOC107684220,LOC107551210 other downstream 982256 10857520 ~ 10883424 (-)
LOC122361037 cables1,LOC107708521,LOC107747516,LOC107681774,LOC107691165 other downstream 1101375 10745576 ~ 10764305 (-)
rxrbb rxrbb,rxrba,LOC107596638,LOC107581542,LOC107752838,LOC107743171,LOC107566635 other upstream 496470 12363785 ~ 12378449 (-)
zgc:92606 zgc:92606,LOC107724707,LOC107549485,LOC107598403,LOC107672985,LOC107744286,LOC108432344 other upstream 1786745 13654060 ~ 13683909 (-)
G112478 NA other upstream 2367239 14234554 ~ 14301619 (-)
dicp3.3 NA other upstream 2630948 14498263 ~ 14503136 (-)
LOC122359961 riiad1 other upstream 2715164 14582479 ~ 14587869 (-)

Expression


Co-expression Network