XLOC_006706


Basic Information

Item Value
gene id XLOC_006706
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007124.7
NCBI id CM002897.2
chromosome length 52186027
location 31089586 ~ 31092400 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00013841
CTGGGCATcaatttttaattattctttattCACCGGTTTGCATTTCCATTTCAGTTAAGTATGTTAATTATTTCATACAAATATAAAACGCATTAATTGACATTGAAAGGCATTTATTTTGACAGAACAGTACAGTAATGGTACAAGACAGAAATGACCTCTGCTTTACTCAAGCATTATTATAAGACTTTTTTAACCTGCGCGATATAATTTCCCTTGGGTCGTACAAACTATTGAAatccaaaccatttttttttgttcaaattatttaaaagtgttacattttacataattcattcattcattttctgccgctttttcAGGGCCAAGTCACGGggacagcagtcttaggagagaaccctagacttccctctccccagacacttcctccaggtcctccagggggatcccgaaGCATTCctaggccagccaagagacattgtccctccagcgtgtcctgggtcttccccaaggcctcctcccggttGGACATGCCTGGActacctccctagCAGGAATGAAACAACTGTACCCAACCGCTGTCTTTTGGAAGGGCCCTTTAGGTCATACCGCCTGTAATAGGTGGTGGTCCCCCTGGAAATGGCATCAAGCTGCTCTCCTAATAACCATCCCACCCAGAACAGAGAGAGGAGGTTGAGCAGGGTCAGCAGGAGGACCCAGGCCTCTCGCCCCGCCACCGAGCCCCAGTCTGACAGCTGCAGGCCTGAAACTTTCAGGTAGAGGTAGAAAATGGCACTGAGGATGAAGATGAGGTGAGCCATTACCATAGACATGAGGAAGAGGATGAAGGTGCGGTGGTTTTCCCGTCCCACACACTGGTTGATGAAGAGGCAGTGGTGGTCGTAGTCCTTGATGCACATGTCACACAGGCGACAGTGTTTACAGTTCTCCACTTGGA

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00013841 True 919 lncRNA 0.47 2 31089586 31092400

Neighbor

gene id symbol gene type direction distance location
XLOC_006705 BX005005.1 coding downstream 13639 31075833 ~ 31075947 (-)
XLOC_006704 BX005005.2 coding downstream 27770 31052536 ~ 31061816 (-)
XLOC_006703 BX005005.3 coding downstream 38430 31042514 ~ 31051156 (-)
XLOC_006702 wdfy4 coding downstream 64081 31024711 ~ 31025505 (-)
XLOC_006701 wdfy4 coding downstream 71626 31015547 ~ 31017960 (-)
XLOC_006707 NA coding upstream 10507 31102907 ~ 31122838 (-)
XLOC_006708 CR931802.2 coding upstream 34049 31126449 ~ 31127046 (-)
XLOC_006709 mapk8a coding upstream 55118 31147518 ~ 31167461 (-)
XLOC_006710 CR931802.1 coding upstream 101085 31193485 ~ 31205193 (-)
XLOC_006711 prdm8 coding upstream 200300 31292700 ~ 31296358 (-)
XLOC_006471 BX537274.2 misc downstream 20824681 10264741 ~ 10264905 (-)
XLOC_006338 rn7sk misc downstream 30263361 825904 ~ 826225 (-)
XLOC_006699 CR762493.2 non-coding downstream 217147 30855319 ~ 30872439 (-)
XLOC_006698 NA non-coding downstream 277403 30808963 ~ 30812183 (-)
XLOC_006718 BX537123.2 non-coding upstream 487048 31579448 ~ 31579564 (-)
XLOC_006722 BX537123.1 non-coding upstream 602531 31694931 ~ 31695047 (-)

Expression


Co-expression Network