G111689


Basic Information

Item Value
gene id G111689
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056714.1
NCBI id CM032083.1
chromosome length 28146790
location 12076453 ~ 12077007 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU164864
GTCAGTGAGAGCCTCCTGCCGTCATTTCTTTGGTCTCTCAATCTTTATGATCGAAGGATGAGAAAAACAATGAGACAACCGCTGCGCACAGGTGTTTCGAAGAAGGAGGGGACGTGTAAAAACAGGTAGCTGCGTATACGCACCGGGATTCATTGTCTCTCATAAAAGAGAGGGGgggagagacagaaaaacagcTCTTCCAAGAGAGCTCGGTGCTGGCTGTTTTCCCAGGGTAATTGCAGTTGTAAGGGATTGTAATTTAGTTCTGCCGAGCTATGTTGAGTTACagtatgcaaatgtaatttCCCTCCATCATCAGCGCAGAGGGACAGCGGAGACTGAAGCGGTTCGCTCAGGCTTCAGTGATAAACATTTGGCAGGAAGGCAACCGATCGTCACCGGGGAATCATATGCCACTTCCAATGAGATGTTTTCTTAAGAGCcattttaaaagacaatgaCTTGGGCAAACGGACTGGGAGGACGACAAACACAGCGGGGCTGGACTGGAGTGGCTCAGCCGAGCTCGGCGAATAGAAACGGCATAACTTGCCG

Function

GO:

id name namespace
GO:0008544 epidermis development biological_process

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU164864 True 555 lncRNA 0.49 1 12076453 12077007

Neighbor

gene id symbol gene type direction distance location
sp8b sp8b,LOC107685617,LOC107596752,LOC107728520,LOC107743231,LOC107684564,LOC101158882 coding downstream 35506 12035907 ~ 12040947 (-)
macc1 LOC107743168,LOC107685548,LOC107596642,LOC107728525,LOC107684550,LOC107550840 coding downstream 63509 12007457 ~ 12012944 (-)
tmem196b tmem196b,LOC107596721,LOC107685588,LOC107728522,LOC107684562,LOC107550817 coding downstream 75546 11999570 ~ 12000907 (-)
twist1b twist1b,twist1,LOC107684561,LOC107596643,LOC107728521,LOC107550839 coding downstream 89003 11985634 ~ 11987450 (-)
ankrd28b ankrd44,ankrd28b,LOC107685545,LOC107745379,LOC107550837,LOC107596646,LOC107684548 coding downstream 190804 11869198 ~ 11885649 (-)
rapgef5b LOC107596719,LOC107685551,LOC107581543,LOC107728526,LOC107674937,LOC107743169 coding upstream 78763 12155770 ~ 12203088 (-)
si:ch211-254p10.2 LOC107685554,LOC107596717,LOC107752844,LOC102209663 coding upstream 131098 12208105 ~ 12214349 (-)
slc6a19b slc6a19b,LOC107743232,LOC107662664,LOC107685553,LOC107596751,LOC105905464 coding upstream 139849 12216856 ~ 12226949 (-)
LOC122360649 NA coding upstream 315760 12392767 ~ 12397250 (-)
LOC122360109 NA coding upstream 342111 12419118 ~ 12422119 (-)
G111688 NA non-coding downstream 294 12075597 ~ 12076159 (-)
G111680 NA non-coding downstream 41327 12032593 ~ 12035126 (-)
G111668 NA non-coding downstream 92807 11983379 ~ 11983646 (-)
G111661 NA non-coding downstream 132498 11942364 ~ 11943955 (-)
G111639 NA non-coding downstream 256675 11818459 ~ 11819778 (-)
G111690 NA non-coding upstream 3645 12080652 ~ 12080853 (-)
G111712 NA non-coding upstream 60454 12137461 ~ 12137772 (-)
G111713 NA non-coding upstream 62170 12139177 ~ 12139530 (-)
G111716 NA non-coding upstream 73535 12150542 ~ 12150877 (-)
G111788 NA non-coding upstream 360418 12437425 ~ 12439653 (-)
LOC122361049 c16h2orf66,LOC107743229 other downstream 209138 11865680 ~ 11867315 (-)
G111490 si:dkey-12j5.1,LOC107738871,LOC107549224,LOC107689883,LOC107717803,LOC108256403,LOC108426361,LOC107593733 other downstream 664676 11410678 ~ 11411777 (-)
LOC122360600 enpp2,LOC107757440,LOC107745056,LOC107697648,LOC107574906,LOC107681346 other downstream 689460 11333175 ~ 11386993 (-)
G111450 mal2,LOC107757438,LOC107571097,LOC107677950,LOC107738940 other downstream 790021 11269620 ~ 11286432 (-)
LOC122360812 cobl,LOC107746964,LOC107684220,LOC107551210 other downstream 1193029 10857520 ~ 10883424 (-)
rxrbb rxrbb,rxrba,LOC107596638,LOC107581542,LOC107752838,LOC107743171,LOC107566635 other upstream 286778 12363785 ~ 12378449 (-)
zgc:92606 zgc:92606,LOC107724707,LOC107549485,LOC107598403,LOC107672985,LOC107744286,LOC108432344 other upstream 1577053 13654060 ~ 13683909 (-)
G112478 NA other upstream 2157547 14234554 ~ 14301619 (-)
dicp3.3 NA other upstream 2421256 14498263 ~ 14503136 (-)
LOC122359961 riiad1 other upstream 2505472 14582479 ~ 14587869 (-)

Expression


Co-expression Network