G111862


Basic Information

Item Value
gene id G111862
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056714.1
NCBI id CM032083.1
chromosome length 28146790
location 12567205 ~ 12652406 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU165120
caataagcaAATAGTatcacataaataatttaaatgtagttgGTAGATAGTAAGTAAGATCAACTAATATACAGTGGtatcaataaaacataatttagaaGATATTATGCTCTTACACATTATGTTTTCAAGCATATTATGATAATAAGCTTAGCCCACGAGTTATAATGAGTTTACTGTCCTCTGCTGGTGAAGCGCTGGAGTCACATTAACAGAAGCTTcagaaaaatcaaacaacacGGCATACCATGTTCACAGAACCCCAAACCTTTATTTTCACCAAAGTTTGCACACACAGAAATGAGAGggggggagggagggagggacaATTTTGGCAGCCGAAGACACTTCAAGCATATTTATAGAGGAGACAGTgatctgaaaaataaatccaaataaaagcataatcaTTCGGTGCATATTCCACATCGCTTCACTTCCAGAGAGAAAGAACACAAATGCTCGGTCAACctaacatgaacacacacacacgcgcgcgcactcGCTCCAGTCGCACGAAAATCAACCGAATTAGAAAATAGTCACACGTCAAAGGCTGTAGTTGGGAGTATATGAGGATACATTCAGCTGGTAAAGATGTTACCTATTTTATCAAGCCAGAACATTCAGAGATATACGACTTCCTTTAATTACGCCGATGAAGATGTCTGCTCCCGCTAGACACAGAGGACAAAACATCAGCCTCGAGCGCCGAAGGCCTTAATCGATGTCGAGGAAACGGGGCAGGATCGACGGAAAGAAACCCCTCGCTCGCAGGTCAGGACCGGCCGCtagtttttccttttcttttgtaatATAACGCAGGCTACGTCAAGCGGTCTAGACTCTTCGTCTAAAAGGGTGCAGCGTTTCCAAACATCAGCCAACAAAAGAGTACGTTCGCAGAGGTCGACATGCAGAGATGTGCGTAACATACTTCACGTGAGGATAATAAGCCAAAAGAAACCTAAAACACGTTTTGCCTACAAATGAAACACTattaacaggtttttatttgtttcgGTACTCGTATTTCAAGCTATCCGTTCAGGAAAATGTCTCGGTCATGCTGTATATAAACGTAAGTGCACTATATATTTCGTGAGTCTGGGTGGGTTGGCGTTTCAAAATGGAAATCTGGGGCCTGAGCGCTTTTTTGCATTCTTCACAATTACACCGAACTTCACATCATTTAACACCGCGAACGTAAGCGGGCGGCTTACTCACAACATCGAAAACCTTTCACGTGATCAAACCGGACGTGCCTCGGACGGAACAACCGCGAAATCGACAAATAATAACCGGAGGGTCGACGTGATGCATTGGATTTGCTATCGCTCGATCGGATGGACggaaagatagatagatggagagaaagactgagcagtgagagagagagagataaaaaagatgtatttacaaaataatacttGTGTCTTCCCGTTACTCTATGAAATCAAGCAAGACCGTTCAAACAGTATACGTGTGTGATGCTAGGTGtttaccagtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgggagggtgtgtgtgtgtgtgtgtgtgtgtgtgtgcg
>TU165121
GGCACCAAAAAGAAAACCCATTCACAAAGCGTACCTAAAGTGCTGTGGCCTGGGTCATCAGGGTCAGGTGTGTTGCTGCGGAGGCTGGCCATGTCTCCTCTCCTGCGCTGCCTGTGTCTGCGTCTGTACTGGAACTCAGCATACGCCTACGACACAAAACCACACACAGCACCATTTCAAAGCTGCTTCAAGAGTACTACCAACATTCCCACTGGACCCTGTGAATAAAAGTCAGAATCTCAGAGGAACCCTAGAGCTCTCTACAGGAAATCTGCTGTGCGGCAGGATCAAAGTTCTGGACTATTGGCATCGTCATGTCAGAAGAACAGACAGACGCTTTGAGTAAagtcatttaaaggaatagtataacaaaaaaatgaaaattatggcattattactcaccttcaaaaatgtttgcataattttaaataatgcataaaaatctCACAAACCTATAATATGGCTTTAGAAGATGTAGATAATAATAGTatgtacaatataatataatataacacaacataacataataatattagaGACTCTATTTTTGCTTACATGTAGTCTATGatatccaaaaaaatattatataaaattataatacatttgttattaaatgattcGTATGAATCTTTAGGGACTTCAGGAAATACTTAAATTCCTCAATGGTCACGTGAAAACAATTTTTACCATGTCAAAAACTGCTCTAATTatagcaagacaaaaaaaatttatggaGAGCGAACAACTGGCTGAAAGCGGAACTATGCTTATACAGGAGGGGCTTTAAGTGGCTGTGGGTGGAGCCTGAGCAGTATGACATCATACTgctccaaaaaataataataaaaattatttttagcacttttttcACACTGCTAAgacatttatatacaaacacCACATAAAAAGTGAATTATGCACCCGATGTCCCCTTTAAAAGATTCTCATTCAGTATTCcatgaaaataaagacaaaaacagtaaaacgacatgagggtgagtaaaaatagccaaaattttcaatttttaaattaatcctTTAGGCTTAATTCAACATATTCGACATTTAGACATATTTGAACAGTCGGACACTAAAACCAACAATATTAAGCAtttcagtgtgtatgtgtgtcagtataatctattaaaatgtaattagcaATCATATTCTATACTTTACTTCTTCCAACTTTATTTTCACCATAGTTTGCACACACAGAAATGAGAGggggggagggagggagggacaATTTTGGCAGCCGAAGACACTTCAAGCATATTTATAGAGGAGACAGTgatctgaaaaataaatccaaataaaagcataatcaTTCGGTGCATATTCCACATCGCTTCACTTCCAGAGAGAAAGAACACAAATGCTCGGTCAACctaacatgaacacacacacacgcgcgcgcactcGCTCCAGTCGCACGAAAATCAACCGAATTAGAAAATAGTCACACGTCAAAGGCTGTAGTTGGGAGTATATGAGGATACATTCAGCTGGTAAAGATGTTACCTATTTTATCAAGCCAGAACATTCAGAGATATACGACTTCCTTTAATTACGCCGATGAAGATGTCTGCTCCCGCTAGACACAGAGGACAAAACATCAGCCTCGAGCGCCGAAGGCCTTAATCGATGTCGAGGAAACGGGGCAGGATCGACGGAAAGAAACCCCTCGCTCGCAGGTCAGGACCGGCCGCtagtttttccttttcttttgtaatATAACGCAGGCTACGTCAAGCGGTCTAGACTCTTCGTCTAAAAGGGTGCAGCGTTTCCAAACATCAGCCAACAAAAGAGTACGTTCGCAGAGGTCGACATGCAGAGATGTGCGTAACATACTTCACGTGAGGATAATAAGCCAAAAGAAACCTAAAACACGTTTTGCCTACAAATGAAACACTattaacaggtttttatttgtttcgGTACTCGTATTTCAAGCTATCCGTTCAGGAAAATGTCTCGGTCATGCTGTATATAAACGTAAGTGCACTATATATTTCGTGAGTCTGGGTGGGTTGGCGTTTCAAAATGGAAATCTGGGGCCTGAGCGCTTTTTTGCATTCTTCACAATTACACCGAACTTCACATCATTTAACACCGCGAACGTAAGCGGGCGGCTTACTCACAACATCGAAAACCTTTCACGTGATCAAACCGGACGTGCCTCGGACGGAACAACCGCGAAATCGACAAATAATAACCGGAGGGTCGACGTGATGCATTGGATTTGCTATCGCTCGATCGGATGGACggaaagatagatagatggagagaaagactgagcagtgagagagagagagataaaaaagatgtatttacaaaataatacttGTGTCTTCCCGTTACTCTATGAAATCAAGCAAGACCGTTCAAACAGTATACGTGTGTGATGCTAGGTGtttaccagtgtgtgtgtgtgtgtgtgtgtgtgggagggtgtgtgtgtgtgtgtgtgtgtgtgtgtgcg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU165120 False 1574 lncRNA 0.43 2 12567205 12624619
TU165121 True 2488 lncRNA 0.40 3 12567205 12652406

Neighbor

gene id symbol gene type direction distance location
ccdc12 ccdc12,LOC107743233,LOC107752847,LOC107581540 coding downstream 69648 12491498 ~ 12497557 (-)
LOC122360109 NA coding downstream 145086 12419118 ~ 12422119 (-)
LOC122360649 NA coding downstream 169955 12392767 ~ 12397250 (-)
slc6a19b slc6a19b,LOC107743232,LOC107662664,LOC107685553,LOC107596751,LOC105905464 coding downstream 340256 12216856 ~ 12226949 (-)
si:ch211-254p10.2 LOC107685554,LOC107596717,LOC107752844,LOC102209663 coding downstream 352856 12208105 ~ 12214349 (-)
LOC122361014 mtbp,LOC107596625,LOC107685571,LOC107707175,LOC107673040 coding upstream 153822 12806228 ~ 12825561 (-)
col14a1a col14a1a,LOC107685600,LOC107707159,LOC107672958 coding upstream 186655 12839061 ~ 12944070 (-)
deptor deptor,LOC107685573,LOC107673035,LOC107596624,LOC107743215 coding upstream 295544 12947950 ~ 12975794 (-)
polr3c polr3c,LOC107685575,LOC107743190,LOC107673034,LOC107707173 coding upstream 390420 13042826 ~ 13048403 (-)
gba gba,LOC107743191,LOC107685577,LOC107673025,LOC107707168,LOC107598431,LOC107596705,LOC107598447 coding upstream 402991 13055397 ~ 13060927 (-)
G111799 NA non-coding downstream 77085 12489782 ~ 12490120 (-)
G111809 NA non-coding downstream 79512 12486851 ~ 12487693 (-)
G111807 si:ch211-257p13.3,LOC107752836,LOC107581541,LOC107685558,LOC107596636,LOC107673049,LOC107743172 non-coding downstream 86230 12480724 ~ 12480975 (-)
G111806 NA non-coding downstream 87417 12479434 ~ 12479788 (-)
G111791 NA non-coding downstream 124592 12441953 ~ 12442613 (-)
G112229 NA non-coding upstream 372527 13024933 ~ 13026129 (-)
G112256 LOC107737914,LOC107549458,LOC107598419,LOC107673038,LOC107750018 non-coding upstream 535513 13187919 ~ 13200640 (-)
G112261 NA non-coding upstream 561524 13213930 ~ 13227818 (-)
G112260 NA non-coding upstream 564797 13217203 ~ 13249624 (-)
G112299 LOC107750016,LOC107549467,LOC107692576 non-coding upstream 636799 13289205 ~ 13292423 (-)
rxrbb rxrbb,rxrba,LOC107596638,LOC107581542,LOC107752838,LOC107743171,LOC107566635 other downstream 188756 12363785 ~ 12378449 (-)
LOC122361049 c16h2orf66,LOC107743229 other downstream 699890 11865680 ~ 11867315 (-)
G111490 si:dkey-12j5.1,LOC107738871,LOC107549224,LOC107689883,LOC107717803,LOC108256403,LOC108426361,LOC107593733 other downstream 1155428 11410678 ~ 11411777 (-)
LOC122360600 enpp2,LOC107757440,LOC107745056,LOC107697648,LOC107574906,LOC107681346 other downstream 1180212 11333175 ~ 11386993 (-)
G111450 mal2,LOC107757438,LOC107571097,LOC107677950,LOC107738940 other downstream 1280773 11269620 ~ 11286432 (-)
zgc:92606 zgc:92606,LOC107724707,LOC107549485,LOC107598403,LOC107672985,LOC107744286,LOC108432344 other upstream 1001654 13654060 ~ 13683909 (-)
G112478 NA other upstream 1582148 14234554 ~ 14301619 (-)
dicp3.3 NA other upstream 1845857 14498263 ~ 14503136 (-)
LOC122359961 riiad1 other upstream 1930073 14582479 ~ 14587869 (-)
si:ch211-105c13.3 si:ch211-105c13.3,LOC107673711,LOC107594941,LOC107582067,LOC107677027,LOC107735771 other upstream 2246776 14899182 ~ 14904907 (-)

Expression


Co-expression Network