G112260


Basic Information

Item Value
gene id G112260
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056714.1
NCBI id CM032083.1
chromosome length 28146790
location 13217203 ~ 13249624 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU165689
CACCCTGGTCGccattttattaatgaaaaagtaAGGAAGCTGAAGATACTACACGTGGTGGCACACAGAATAGGCACACATGACATGCAAAATAATCAACCTTAGTGTTTAGTGAATAAGAACAATAGTTTATTTGTGGTCTTGGAGAAAAAGACTACATTCCCCTGCATTACTTTGGCTAGGTGCAGTGTGGGTAACACTGATGCATTAGGGCATTTGTACATCAAAAAACAAGAGTCACAACACAAAATGTTCATAGTCATCCACATGTGGAAGTGCAGAAACTTAAAGGACTACATTACCCAAAATCCATCTGCAAAAAAGTATATGGTTAAAGAGGAGGCAAATTACTGGGCAAAAAAGGCAGTTAGCTTTAAACACCTACatgcaaaaaagagaaagacagcgCAAATGGTATGATGGTTCTTTATAATGCGAGTgtacaggaaaaacaaaaaaaaaatctatttattcaAGGGAAACATAGTTTGCGATCATCAAGGGCAccagttttttttcccagcattCCTCTGACACATAAATTGACCTGGCTGTCACAGCAACACTTCTTCTACGGCTGGTGTTGACGACGAATGCTTtaacaaacaggaagtgacaaGATCTCCGCGGCTGGGCGGAGACTTGCATTAAAATAGACAATAtcaaggaaacaaaacaacaaaaataattcatttgtaGTATTAAcaacaatagtaataatgatcagatcaataataattcataataagtGAAGTTACTTTAATGGTCGTTAAGGAAAGAAACAGACATGACTGGAGAAATAACAAGCAATCACGAAACTAATAGATTTTGAAACATTTGTACTGACACCGGTAATCAGGTTGTAAAAATTCAGTATCGTTCCAATAAAAGTAAGTGCATATACAGGTTGCGTCTACATGTCGACctgttttgaaatgcaatttcCAATGCACAGAATCTTTCTATACAATCAGATGCGAGACGTGTCCCATGTATTCAATCCATAGAGGtccaaattgtgtttttgcacaGCAAGAACAGCCTCTGCAAGTTCACTTAATATCTGCACACTGTGAATGtatgctgcttttttgtttgcaaCTGTGAGTCAGATTCCTATAAAAAGATGAGTACATTGTAGACAAGAGATAGCAACTTTAAGAAGAAAAGAATCTTACTGAGTTCaccattaaatgaaataaacaaataaaacgcaGATAAAATGTGATAATTAATGCATGTCTTTCTTTACCGTCTTCTTACCATCATAACATGTTCAGTTTTCCTTTGagaatgacaaataaatatcaGCAGTAGACTGATAAACAAGGTTCGTCCCCAAAGAGTTGAGATGCACCTGTCATTCCTCTCATCCGTGGTTTATCACAACTTAAGTGCTTGAATAAATCTATATTAACATTTCtatacaaatttaaatgcatattttttcttaGTATTTTACAGTTTCATTTCTCTAGAaagttattttcaaattttttttttctaaggttCTAGGCTTGATTCtgcccctctttttttttttttttttttttttttttttttttttttattgtacttttgttTCTGCAAAAGCGACAATAATGATCCAGATCAGTCTagattcatgaatgaatctTTCCTCGGGATTTGTTTGAACCAGTATAAAAGGTTCcttgaaaaaaaattgcctCAGAAGAATGATTCATCGCGAATCGGACCTCATTACCATGTTCCAGAGCACCA

Function

GO: NA

KEGG:

id description
ko04710 Circadian rhythm

RNA

RNA id representative length rna type GC content exon number start site end site
TU165689 True 1743 lncRNA 0.35 2 13217203 13249624

Neighbor

gene id symbol gene type direction distance location
josd2 josd2,LOC107549461,LOC107750011,LOC107737925,LOC107598457,LOC107692554,LOC107672995 coding downstream 12606 13201382 ~ 13204597 (-)
flcn flcn,LOC107549459,LOC107692552,LOC107750008,LOC107673020,LOC107598420 coding downstream 46219 13162930 ~ 13170984 (-)
zgc:174888 LOC107549460,LOC107750007,LOC107598425,LOC107692550,LOC107673023,LOC107737913 coding downstream 54419 13158802 ~ 13162784 (-)
grwd1 grwd1,LOC107692548,LOC107549456,LOC107750005,LOC107737912,LOC107598422,LOC107673021 coding downstream 59330 13152349 ~ 13157873 (-)
atg12 atg12,LOC107692547,LOC107673043 coding downstream 70789 13144049 ~ 13146414 (-)
pitpnc1b zgc:101640,LOC107692561,LOC107549471,LOC107737922,LOC107598395,LOC107672976,LOC107750023,LOC108437483 coding upstream 56404 13306028 ~ 13319763 (-)
cacng6b cacng6b,LOC107549474,LOC107692568,LOC107724866,LOC107744303,LOC107672978,LOC107598398 coding upstream 223851 13473475 ~ 13485710 (-)
u2af2a LOC107692567,LOC107672971,LOC107724853,LOC107598390 coding upstream 237727 13487351 ~ 13494251 (-)
epn1a epn1,LOC107672968,LOC107598387,LOC107724817,LOC107744298 coding upstream 257007 13506631 ~ 13516502 (-)
aicda aicda,LOC107549448,LOC107692585,LOC107724977,LOC107744312,LOC107598400,LOC107672983 coding upstream 296656 13546280 ~ 13548312 (-)
G112256 LOC107737914,LOC107549458,LOC107598419,LOC107673038,LOC107750018 non-coding downstream 16563 13187919 ~ 13200640 (-)
G112229 NA non-coding downstream 191074 13024933 ~ 13026129 (-)
G111862 NA non-coding downstream 564797 12567205 ~ 12652406 (-)
G111860 NA non-coding downstream 605209 12557811 ~ 12611994 (-)
G111799 NA non-coding downstream 727083 12489782 ~ 12490120 (-)
G112299 LOC107750016,LOC107549467,LOC107692576 non-coding upstream 39581 13289205 ~ 13292423 (-)
G112315 NA non-coding upstream 181520 13431144 ~ 13434295 (-)
G112336 cacng7b,LOC107724890,LOC107549472,LOC107598394,LOC107672975,LOC106570002,LOC105902015 non-coding upstream 191046 13440670 ~ 13447178 (-)
G112327 NA non-coding upstream 199883 13449507 ~ 13471686 (-)
G112339 NA non-coding upstream 205933 13455557 ~ 13461725 (-)
rxrbb rxrbb,rxrba,LOC107596638,LOC107581542,LOC107752838,LOC107743171,LOC107566635 other downstream 838754 12363785 ~ 12378449 (-)
LOC122361049 c16h2orf66,LOC107743229 other downstream 1349888 11865680 ~ 11867315 (-)
G111490 si:dkey-12j5.1,LOC107738871,LOC107549224,LOC107689883,LOC107717803,LOC108256403,LOC108426361,LOC107593733 other downstream 1805426 11410678 ~ 11411777 (-)
LOC122360600 enpp2,LOC107757440,LOC107745056,LOC107697648,LOC107574906,LOC107681346 other downstream 1830210 11333175 ~ 11386993 (-)
G111450 mal2,LOC107757438,LOC107571097,LOC107677950,LOC107738940 other downstream 1930771 11269620 ~ 11286432 (-)
zgc:92606 zgc:92606,LOC107724707,LOC107549485,LOC107598403,LOC107672985,LOC107744286,LOC108432344 other upstream 404436 13654060 ~ 13683909 (-)
G112478 NA other upstream 984930 14234554 ~ 14301619 (-)
dicp3.3 NA other upstream 1248639 14498263 ~ 14503136 (-)
LOC122359961 riiad1 other upstream 1332855 14582479 ~ 14587869 (-)
si:ch211-105c13.3 si:ch211-105c13.3,LOC107673711,LOC107594941,LOC107582067,LOC107677027,LOC107735771 other upstream 1649558 14899182 ~ 14904907 (-)

Expression


Co-expression Network