G112336 (cacng7b,LOC107724890,LOC107549472,LOC107598394,LOC107672975,LOC106570002,LOC105902015)


Basic Information

Item Value
gene id G112336
gene name cacng7b,LOC107724890,LOC107549472,LOC107598394,LOC107672975,LOC106570002,LOC105902015
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056714.1
NCBI id CM032083.1
chromosome length 28146790
location 13440670 ~ 13447178 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU165802
tcTTTGAGTTAGTCTCTGGTGTGATAGGTAttgttgttttacagttttaagcTGGTCAACGCCTATTTGTTTCTCTGGTTTCAGAGTAATTCTGTATggttgtttttccttttttacacaAGCATTTTTTGCTGCATGCACTGCGTTGACTCGAACgatttcagcaccacggacagcgcTTAAAGCCGCCGCTTCAATATTTTCTTAACCACTAGAGGGCGCTGTGAACactgacaatttaaaatatgctgCCAGGCAAGTGCTTATTATGAGGACTCACATACGATATGTAGAAAAGAGTCttacaaaataacaacatttaaatgcttttaattaatttttcttgtCAACATTCTGCAGAAAGGCAGTGAACCAAATCACAGCCGAAACACGACAGGACACAGTATTTATACaagaaatattcaatatttctcaactctttgaaaaaacaaacaaacaatatgttcATCGTTTAAAATTTGTTCAGTAACAAGTAATTCCCACTTTAGcatttaatgataatattaacaCTAAAACTAACAATTCACAGATTCCATGATGAGAAATAACTTAAgttctgtaatatatatatatttctatcaCCTATAGAAGGCAATAGTCTGTTATGTGCACTAATGTGTATGTCTAAATACATGAATTGTCAGTTCTGTTGTGTGCGATTGTCAAGTGTTCTGCATGAACCCTCATTTGATCCATTGCAGTTTAATATGCTACAATTTCACAACATTCAGTCTTAAAAAGAGGCCTTTTGTTACAAACAGTAACTTCCTGTTCtcatataaaaaaactgcatcTTGCCTTACATCATATTTCTGTTCCTCATTGTCTGTGCATTATCtgagtaaaaacaaacactctATAAACTTTCTCATCTGTCTGCATTTAGCATGGTGAGGCGCTCATGCGCATATGTGTGTGATAGTGCGGGGGCGGCACTGCAGCGGGCGCCGCAGACAGAGGCAGGGTCTGGGATGCTCCAGCTGCCCCGTGCGCCCCAGGGTGGAGGGGATGGTTGTGCGGGAATGGAGCTGCAGAACCTGGTGACTGCAGCTGATATCCGGCTCCGGAGGTGGGGCTGGATGCAGCGGTGATGCCCGGAGATGACGCGCTCTGTGGGGCGCCGATCTTCGGCGGAGGCTGGGGGTTCTGCGTGAGCTGGATGGAGATGTCGCTGGAGATCTCGGAGGCGCTCCGAGCGCGCTGGGGGGGAGGCCAGGTCTCGGGGTGCAGGTACTGGCCGCTGTAGTCGCTGCCCTCAGAAAGGCGGGGGCGATAGAGAGCCGGGTGAGGCCGGTACATCTCCTCTTCAGCGTAACGCTTCATGAAGAGATACACTGACATCACACCAGCGCCCTGAGACAATGAGAGAAAAAGTTTAACACCGAAGTCATAACTGACACATCTGAATGATATTTTCAATTCTTGACATTAACAAACCATTTACTACAACTTCAATACTTTACTAATTGACTGCTTATTAATGGTTAGTAAGGTAGTCGTTACAGTAAGTTTAGGTATGGGGTAGAATATGCATAATGTGtgctttaagtactaataaacagccggTATgtcaaaaatagcaataatagtcAATAATAGGCCTACAACTAGTAAATTTTGAGAATACTGTtgcaacattttcttttattttgtctggCGAACATCCCAGAAATGCATTAGGTTGGaaagattttttaatgtttccaaAACTAGTCTCTTAAGGTCCCCAAGTAAAACACAGTACAGTTGTggagtattattataatttaaaacacatgttataaaatgtatcaatacttcagtcttaagtgtcacatgaccctcataaatatatatattatattttgatcaatttaattaaaatgaataaataataactattacataaaataaaaattactaataacaacttttaaacagtagagTATTATATTAACAGGTAAGTTATAGGAAGATGATTTAGTTATTCTAATAAAATCAGTGAGCCCATGAGAATAGTTCTACAGACCTGTGgggttatttataattattaataatttcttatttgcatttattagtAATCTCTTTTAAGAGTTTCCAGAtgttatatttatgatatatagtttgaaaatatgtacaaaagAAAGGACAGGTTTATTAAGGTATGTATctatgtgtttaattatttatttactttagatACATATGGCAAATCAATAAAGCATTTATGATAGGTTGGAAATAACAGCGGCATGCATAGGAATTACACAAGGTGATTTTACAGCAATTCCTCCTCGCTCTAATATTCTAACCGACAAACTAATGTTTCCTTTGGCGACCATAATATAAAAGGATCCTGCTGaatcaagcagaaaaaaaagagttagaGCTTGAACTTCAATTTTGCTTAATCCTCACTTTATGGGCACAGACAAGAAACGGCTGACAGACAGCCTGCTCCATCATCCACTTCTTCATCACAATCACGTCGATAACATCTACACTTTGTGTGGAAATATCAGGAAACCTACCTAATCTCATGTGGAAATTGtgtagaaatagaaatatgtaCAAGTTACTTAACGTATTGCTATGGCAGTCGATATGAAACAATGACATTAAGTGCTCTAAATACAGTACTCAGAGTAGCAAATAAAATGGAGCGCATCTGAAGCTCCACATTCATAATACATAAAGAGCACATTCGAAGCTCCTGCCTTTAACAGTTAGAGCAGGGTCATGTTAAAAGCATCTGCTTCAGCAGCATCAAGTGACATAATTACAGCACCATCATTTGTTAAGCCCCTCGGGCCTAGAAGAACGGATACGTTCAAGTCATTGGAGCTTTCACAAGAAATATGTCTACATCTTGGCCATTCAAGGCCGAGGGGCttgaattaacaaaaaaaaggcaCTGATATTTAGGATCGAAATTTCATCCCCTGACCTCTTTGAGCAGGAAGGAGCTGGCAGCAAACGCAAAGGACCAGCCGTAGCGGTAGTTGAAGAACTGCTCTGGCTCCCGCGGCCTGTTCATCACTTCATCATTGATGCTGGAGATATACAGCACCAGCCCCACCACCAGACTCAACCCTGAGAGAAAGAACAGGCAAGTGAAGAAAAATCAACAGACCACCAAGTTGAACCTCCTGCTGaatgacaaatattaaatgCTAGAAAACTAGAACAAAAGAATATAGTTAAATAACTGCACTGTGATGCGCTTCCTGCCGGGTATCCCTCGGCCAactccacagacacacacaagtaCTGCACACACTCCAGGGCTCTGCCCGGCCACTGATGAGAGGACATCAGCTCCATCTAAATAAATCACAACCCCAAACTCTCCTCACTGCAGGCGCAGCAGGCTAGGAGAGATGCATGGAGGACAGAGCAGATAAAACTGCTTGGTAAGTTTGACGTCACGTGTGACCGTTTTGGGGTCCTCGCGCTCTTATAGACGCCAAAAGCAAACAAGGATGCTAATATACATTTACTGTAAGCtggaataatataatatatctttaTGCCCATGTTGACATTTGTGATTGTCAGACTTTGatgtattattaaagtattgATGTCTAGGATGCTGTGGGATAGTTTgttatacttaaaataaaaattaaaactttagcTTTAGTCCCTTAGTCCATCTAAGATGTTAAAGCTTGGAGAAATGAAGCATTACATGACTTGTTCACCGCTGGATCTTCAGCAGTCAAaatgagagctgataaaaacatcacactaATCCATCAAATCACCTTATGAAAGAAAAAGCTGAATGTTTGTAACAAACAAATCCCtcattaatgtgttttaactttaaactctTTAAACCGCTTCCAGCCAAAATATAAGTCAATAACCCATAATAAGTCAATAGTCCATCCCCATTATCATTAAAATCCACAACATATTTGTTAAGATCTATTTTGAACTCTTTTCATTCGTGCATATTTCTCCCCTGATTCAGACAACGTGACTTTTAGCAAGATTTCCAAACATAACGTTTCCAACAAATTCAGATGGCCTCAGAGAGAGTACGTTTGAATAAAATCTGAACTATAACTTTAACAAGCAGAGGCACagattgtgagtgtgtgtgcgcgggtTTGGACAGAGAACGGCGGTGAAAAAGTCGAAGGAACAGGGCGAGAAAAGCTCACACAACGCCAGAAAAACAAGAAATCcctgtaatatttattgcaaCAGCGGAATGACCGATTCTCTcacccacaaacacaaaacaaaaacactacattCCTGCAAACATCAGCTACATTTCACAGCCGCTCCATCTAACGGCACTATCAGCGCTCTTGatctttactttttaatggCTTCTTTCAGCAGAGGCACTTTTATCAGCCCTGAGTATCTGAAATGCCCATTACATATTCAGCAGCAGGCTGATAGGGAACACGGAGAAAAGGGACAAGTAAAAAGGTGTTTTTCAAGGACGGTCTGTCAGGAAGTTTGTGCTGCAAGAGGAAAGAGGTGTTTTTCGATAAAGTTGAAGGTCTTTTCTGGCCGTGTGCAAGGTTGAGGCAGCGATGCGGTAAACAACGCTGGCATCTGCATACAAATAAGCTCTACATTCAGGTTAGGGTTAGACGCTCAATGCAGACTGATATTAAAGTGCTATTTCATGTGCGTTTACAGTGGAGTTCAAACCTGGTTCACGAGGGAAAAGcgttcattttaatgttattatgatATACTACAATACTGTTAATAAAACTgctgttttaatgaaatgtttatatgtattgGCATCGAGCAAATTTGTCCGCAAGTAGATGTATGATCTGAGAATGATGTCACAAATTTGCTGGTTTGATTAGAAActaacacattttgtaaatattcaatatataaagtgaaaagtgactttaaaatgtaactgtttaACAAGCTGGTTTTAGGGACCTagaaatgaacatattttgtaaatattaaatatttcaaaaatgcttaaaatatagCTCAATTCTATAATTGCATATTGAAAATTCGAATTCTGTACATAAATGGTTTCaaggtttaaaagaaaaatgagataAGACTCCTGAACAGTGCAGCTATATGACTAGTTTATGttaactaacaataataattcaatcATTAAATGTCCTTTCATATGAGCTCTTTATATTTGGACAAAATTGATGCTGCAATGGCTTCCGGGGTCCCTGCCTGATTCTGACTGaccatgttttatattttataatcttGCTGACCTCTGCTGGTGCAGCCCTGAACTGCACGCTCAGGTATTCGAGGTAtctactggaaaaaaaatctggcacCGTTGACTGATGAGTTTAATCTTCACGTTTACGTGATATAGCTGTGCCTACATCaacaaatgaatgtgtttttttctctgtgttagAACATTACATGAGAAAATAATAAGAGCAAAAGATAAGCAATCGTGTAAAAAGCACTATCATGTGACAGAGGGTTAAGGTATTCTACTCGTATGATAGATGTGTTATTTTACAGAATaactaatgcaataaaactacGGCAATTCCTTCCAAAAAAACGTTATCGCTGCGTCCACTGCTTCCAAAAACGgctaaataataaacagatgGAGTGATTTCATGCTCAGACACAGGTTTATGATTGGATGAGACATCATTAATGTAATACAGATGGTACCGCTGCATTCTGGTGAGTGCAGAACACAAAATCCTCACACATTTAATCttctgtattaaatatattatgaactatttttaactgtaaGAGAATTTTTTGAAAGAGACTTAATTCAAAAGAATGTTCCTCCGGGCGCATTTGTGAAGACATAATTATAGATGGCACAACATCTATCCTAAAAGTCTTACGTAATAtgttcaatataaatataaaatgtctaaaaacgGAGAAAACTGAATAGAACGTAGGAAGTATGGACTGATTGCTCCTGGTTTGTCCACCTTACGGGAAGGAAAGGTTTCCCAACTACCtgagaggatgaagaagatTCCAGAAACGAAGGCCAGGATGGTTCGCTGCGGACGGATGTGGCCCACGTTACTGATGATGAAGGCTGTGAAAACGAAGAGCAGGGACACCATAGGGAAGGGTGTAGCTGTCCGCACCATCTCTGTCAGAGCAGGAAATACATGTGTGTGAGAGCAGTGCCTGAAAATGCGGTCATTTGTGAAGTACGTTGACTTACTGAGGATATTTGCCGTATTTTCTGTGGTGATTTCAATCTCGGGCTCTGTGAAATACTCAGAGGCCACGCATCTACCTTTCTCTGTACCTAAAATAGTGAGACAGAGTATATAATCAAATttctatatgtatgtatacaatacataaacatataagtACATATGTAATATTATGACATATCAGActtatttgaca

Function

symbol description
cacng7b Predicted to enable channel regulator activity and voltage-gated calcium channel activity. Predicted to be involved in several processes, including neurotransmitter receptor internalization; neurotransmitter receptor transport, postsynaptic endosome to lysosome; and postsynaptic neurotransmitter receptor diffusion trapping. Predicted to act upstream of or within calcium ion transmembrane transport and regulation of ion transmembrane transport. Predicted to be located in membrane. Predicted to be integral component of membrane. Predicted to be part of AMPA glutamate receptor complex. Predicted to be active in postsynaptic density membrane. Orthologous to human CACNG7 (calcium voltage-gated channel auxiliary subunit gamma 7).

NR:

description
PREDICTED: voltage-dependent calcium channel gamma-7 subunit-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU165802 True 6399 lncRNA 0.39 3 13440670 13447178

Neighbor

gene id symbol gene type direction distance location
pitpnc1b zgc:101640,LOC107692561,LOC107549471,LOC107737922,LOC107598395,LOC107672976,LOC107750023,LOC108437483 coding downstream 120907 13306028 ~ 13319763 (-)
josd2 josd2,LOC107549461,LOC107750011,LOC107737925,LOC107598457,LOC107692554,LOC107672995 coding downstream 236073 13201382 ~ 13204597 (-)
flcn flcn,LOC107549459,LOC107692552,LOC107750008,LOC107673020,LOC107598420 coding downstream 269686 13162930 ~ 13170984 (-)
zgc:174888 LOC107549460,LOC107750007,LOC107598425,LOC107692550,LOC107673023,LOC107737913 coding downstream 277886 13158802 ~ 13162784 (-)
grwd1 grwd1,LOC107692548,LOC107549456,LOC107750005,LOC107737912,LOC107598422,LOC107673021 coding downstream 282797 13152349 ~ 13157873 (-)
cacng6b cacng6b,LOC107549474,LOC107692568,LOC107724866,LOC107744303,LOC107672978,LOC107598398 coding upstream 26297 13473475 ~ 13485710 (-)
u2af2a LOC107692567,LOC107672971,LOC107724853,LOC107598390 coding upstream 40173 13487351 ~ 13494251 (-)
epn1a epn1,LOC107672968,LOC107598387,LOC107724817,LOC107744298 coding upstream 59453 13506631 ~ 13516502 (-)
aicda aicda,LOC107549448,LOC107692585,LOC107724977,LOC107744312,LOC107598400,LOC107672983 coding upstream 99102 13546280 ~ 13548312 (-)
nat14 nat14,LOC107724968,LOC107549449,LOC107744294,LOC107692586,LOC107672977,LOC107598397 coding upstream 105362 13552540 ~ 13555963 (-)
G112315 NA non-coding downstream 6375 13431144 ~ 13434295 (-)
G112299 LOC107750016,LOC107549467,LOC107692576 non-coding downstream 148247 13289205 ~ 13292423 (-)
G112260 NA non-coding downstream 191046 13217203 ~ 13249624 (-)
G112261 NA non-coding downstream 212852 13213930 ~ 13227818 (-)
G112256 LOC107737914,LOC107549458,LOC107598419,LOC107673038,LOC107750018 non-coding downstream 240030 13187919 ~ 13200640 (-)
G112327 NA non-coding upstream 2329 13449507 ~ 13471686 (-)
G112339 NA non-coding upstream 8379 13455557 ~ 13461725 (-)
G112350 NA non-coding upstream 87543 13534721 ~ 13543311 (-)
G112361 NA non-coding upstream 159453 13606631 ~ 13609334 (-)
G112377 NA non-coding upstream 171509 13618687 ~ 13619336 (-)
rxrbb rxrbb,rxrba,LOC107596638,LOC107581542,LOC107752838,LOC107743171,LOC107566635 other downstream 1062221 12363785 ~ 12378449 (-)
LOC122361049 c16h2orf66,LOC107743229 other downstream 1573355 11865680 ~ 11867315 (-)
G111490 si:dkey-12j5.1,LOC107738871,LOC107549224,LOC107689883,LOC107717803,LOC108256403,LOC108426361,LOC107593733 other downstream 2028893 11410678 ~ 11411777 (-)
LOC122360600 enpp2,LOC107757440,LOC107745056,LOC107697648,LOC107574906,LOC107681346 other downstream 2053677 11333175 ~ 11386993 (-)
G111450 mal2,LOC107757438,LOC107571097,LOC107677950,LOC107738940 other downstream 2154238 11269620 ~ 11286432 (-)
zgc:92606 zgc:92606,LOC107724707,LOC107549485,LOC107598403,LOC107672985,LOC107744286,LOC108432344 other upstream 206882 13654060 ~ 13683909 (-)
G112478 NA other upstream 787376 14234554 ~ 14301619 (-)
dicp3.3 NA other upstream 1051085 14498263 ~ 14503136 (-)
LOC122359961 riiad1 other upstream 1135301 14582479 ~ 14587869 (-)
si:ch211-105c13.3 si:ch211-105c13.3,LOC107673711,LOC107594941,LOC107582067,LOC107677027,LOC107735771 other upstream 1452004 14899182 ~ 14904907 (-)

Expression


Co-expression Network