G112473


Basic Information

Item Value
gene id G112473
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056714.1
NCBI id CM032083.1
chromosome length 28146790
location 14208396 ~ 14210533 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU166021
gtagtttttatataataatataagcaCTTCAGGTTAGATGCTGAATGCATTACATTGCCACTGTACTGACTCTGACTGCATTGACATAATAGCAGAGGATTTTATTCTCCTGTTATTCTGCTCCCCATCCTTCACCTTTTCTTGGGTACTTATCCTCATCAAAGTTAATTCCTTCACTCTCTTGACTATACTGACCACTTCAGAGATCTTGGTAatcttaaatttaaaagatgATTTGAGATTATGAGGGACTCACATGCATGAATTAACAGCAGTTCTCACGCTACTTCACACGATGACGCAACTCTTACAGACTAAAATGAGGGTTTCTTTGACTGTCTCCCTCTGTTCCTCGATCCCCCATTTTCTGAGTCAGCATTATGACTAAGAGATAAGATCACCTGACCGCAGTTGCCGTGGAGACGGAGATTTTTTCCCCTTCTACTTCTCTCTGCAGCGAGTGGGGGGGAAGGGAGGGATGCTGCCAAAGGTTAAAGAAGGATAGAGCATACATGGTGTCAGCCATTTTGGttcttaaaaatcaaaaaaaactttatgagTAATGTGCCACAGACAATGCTGCCATATATTCACCTTAAGGGCTTTTATTGGGCcgaacagctgattaaaacataaACCGGGTATCAAATGTTGCcaaatgcaattcatttaactttttctgctattcaaaagacaaaataaataccaGCTGTAAGAATACATGCATAAACAATGACTGACAAATTTTCTTTTCAAGCAAATAATGTTGGTGTAACAGCAAGTTtatccaaagaaaaaaataaaaacacaatgtgtCTCCCTTGCATATGACAGAATTGCTTTCCATTACACATCAAGCCCCTGTCCctatgtgcgtgcgtgtgctAAATGTGTCTATATAGGAGTCCACGAGTGAGTCTAGTTTTTATTTCTTAGGTGGCAAACATGGAGTATATTCTTATAAACCCTATATGTTTAGTTTACACCCAAATTTTTGTCATTGTAATAAGATGCATGCATTTTGTCAATATCAATAGCAATTGGCCATATCTTTAAAGTACATCTTACTACACTGGTCATGTACATTAGTGGTGAAGGATCTGTAGACAGTAGGTTCGACTAAGATGAAAAACAAGCAACTATCAAGATGCTGTTGAGCATCTGTAATTTTTGGCAGCTTGTTGCCTGGAGTATGATGTTTTTCCCGTATCCAGATATTATAGCCTAGCTGTGAAAAAAACTCTCAGTTTGTTGGCCTGACATtatgtgcatgttttctttaaaatatgaaacttcTACATGTGTCTTTTGTATGAGACATAGTTAAAGGGCAACCGTGTTATTTTAAGGTAACAGCATGTGTTTGCTTTGTAAGCTGGACTTTCCAGGGTCACTGAGTCTGAGGTCAAACTTACGATTAATCTCTCCATCTTCCTCTTTCTAATGAACTTGCGTGTAGTCATCTGTTCTCTTTCATTGTACAGTAAATCAGTACGCAGTATGAAGCTATTCTTGCAGTTAACAAGTTCATCATACTGTACTCAGTGTTCTGGATGCTGCTAATAAATATCAGTAAAACAGTCATTCAGATTTATGTGTAATGAACCTTAACATAACTAAGGTTATGCATTAGTTATTCTTGTTTAAAGAagccacaaaaatatttcattattccAGAGTGCAAAAAAGAGAGTCTTGAATACAGACATGCACCACAAATAATGAAGATGCCAAGATATGTGCGCTAAAATCGATCTGATAACTGCAGAATCACaatcaattaaattatacatacaaCATTGGagtctttgtgcaaaaaaaaaaaaaaaaaaaaaaaaacactcgcTAAGATCTTACAGTATTAAAGTATGAAAGGACCGTTTTAACATACTGAACAAAGTGTGCTTAAGGCCTACTGCAGTGTCCGCTAGAACTGCAGCTGTGTTCTCATTCTCTGACAAATGTAATACATGTatgataaaacacacagaaacaacaaTAACCACACACGTTTACAATACATGAATCATGCAATCACACCGATTATGACTTAGCTTATTCTTAGtccatttttatcaaaaaagaGATTTTCTCAGAGCACACGATGATGCCGTGCGACTGTCACCTTTGGAATTCTG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU166021 True 2138 lncRNA 0.37 1 14208396 14210533

Neighbor

gene id symbol gene type direction distance location
atp1a3b atp1a3b,LOC107551687,LOC107700181,LOC107723432,LOC107582039,LOC107717437 coding downstream 179 14187241 ~ 14208217 (-)
dedd1 LOC107551690,LOC107717438,LOC107700182,LOC107671190,LOC107582037,LOC107723479 coding downstream 26291 14171168 ~ 14182105 (-)
pou2f2a pou2f2a,pou2f2,LOC107717432,LOC107671217,LOC107551663 coding downstream 55535 14116537 ~ 14152861 (-)
erfl3 erfl3,LOC107582036,LOC107724159,LOC107671192,LOC107551693,LOC107700185,LOC107717433 coding downstream 105116 14060753 ~ 14103280 (-)
cicb LOC107717431,LOC107551694,LOC107700186 coding downstream 150207 14020963 ~ 14058189 (-)
si:ch73-22o12.1 LOC107700179,LOC107717440,LOC107723468,LOC107671184,LOC107551686 coding upstream 9506 14220039 ~ 14289830 (-)
vars1 LOC107700174,LOC107717441,LOC107551685,LOC107723495,LOC107671187 coding upstream 103356 14313889 ~ 14324941 (-)
LOC122360758 LOC107700176,LOC107717444,LOC107551680,LOC107671188,LOC107723496,LOC107582045 coding upstream 115125 14325658 ~ 14329605 (-)
ino80e ino80e,LOC107723407,LOC107700176,LOC107551684,LOC107717446,LOC107582046,LOC107671171 coding upstream 117028 14327561 ~ 14334066 (-)
si:dkeyp-77h1.4 si:dkeyp-77h1.4,LOC107717443,LOC107551679,LOC107700178,LOC107723397,LOC107671181,LOC107582048 coding upstream 130131 14340664 ~ 14357370 (-)
G112464 NA non-coding downstream 97934 14110148 ~ 14110462 (-)
G112449 NA non-coding downstream 298660 13909324 ~ 13909736 (-)
G112448 NA non-coding downstream 306783 13901137 ~ 13901613 (-)
G112447 NA non-coding downstream 307320 13900864 ~ 13901076 (-)
G112426 NA non-coding downstream 421943 13785015 ~ 13786453 (-)
G112474 NA non-coding upstream 160 14210693 ~ 14210939 (-)
G112479 NA non-coding upstream 82206 14292739 ~ 14296572 (-)
G112483 NA non-coding upstream 92591 14303124 ~ 14303535 (-)
G112612 NA non-coding upstream 117419 14327952 ~ 14328203 (-)
G112659 NA non-coding upstream 380829 14591362 ~ 14654150 (-)
zgc:92606 zgc:92606,LOC107724707,LOC107549485,LOC107598403,LOC107672985,LOC107744286,LOC108432344 other downstream 524487 13654060 ~ 13683909 (-)
rxrbb rxrbb,rxrba,LOC107596638,LOC107581542,LOC107752838,LOC107743171,LOC107566635 other downstream 1829947 12363785 ~ 12378449 (-)
LOC122361049 c16h2orf66,LOC107743229 other downstream 2341081 11865680 ~ 11867315 (-)
G111490 si:dkey-12j5.1,LOC107738871,LOC107549224,LOC107689883,LOC107717803,LOC108256403,LOC108426361,LOC107593733 other downstream 2796619 11410678 ~ 11411777 (-)
LOC122360600 enpp2,LOC107757440,LOC107745056,LOC107697648,LOC107574906,LOC107681346 other downstream 2821403 11333175 ~ 11386993 (-)
G112478 NA other upstream 24021 14234554 ~ 14301619 (-)
dicp3.3 NA other upstream 287730 14498263 ~ 14503136 (-)
LOC122359961 riiad1 other upstream 371946 14582479 ~ 14587869 (-)
si:ch211-105c13.3 si:ch211-105c13.3,LOC107673711,LOC107594941,LOC107582067,LOC107677027,LOC107735771 other upstream 688649 14899182 ~ 14904907 (-)
LOC122359907 LOC107594909 other upstream 698087 14908620 ~ 14913646 (-)

Expression


Co-expression Network