G112483


Basic Information

Item Value
gene id G112483
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056714.1
NCBI id CM032083.1
chromosome length 28146790
location 14303124 ~ 14303535 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU166037
GGGAGAAAAAGCAAAGTAGAAGGAGGTGCTGTGCATTTCAATCACCTGTCTTAGATCATCAGGATTTTCATAGATGTTCTCCACCTCTCCGGAGTGGTGAGACAGCGATTGCTCGACACCTATGTGAACACAGACACATGAGGGCTTCTGTCCATCAGCATCTGCCAGGGTGAACTGACAGCCTTCTGATCTTTGATGGACAGACTCAGGGGGGAAAAGACAAATGCAGGGCCTTACTTCGCCGGGTGACGCAATAGCCCTGTCTCCATAGCAACACCCCAACAGCTACGGCAACCAGGGGGATCAGAAAGAGGAGGAATGAGAAGGTGGAAACATGAGAGGATGCTGAAACATCTCCTGCTGGGGGGAGtgtgagaaagacagaaaaagaaacgcTAAGTTAGGTTACTCa

Function

GO: NA

KEGG:

id description
ko04512 ECM-receptor interaction
ko04640 Hematopoietic cell lineage

RNA

RNA id representative length rna type GC content exon number start site end site
TU166037 True 412 lncRNA 0.50 1 14303124 14303535

Neighbor

gene id symbol gene type direction distance location
si:ch73-22o12.1 LOC107700179,LOC107717440,LOC107723468,LOC107671184,LOC107551686 coding downstream 13294 14220039 ~ 14289830 (-)
atp1a3b atp1a3b,LOC107551687,LOC107700181,LOC107723432,LOC107582039,LOC107717437 coding downstream 94907 14187241 ~ 14208217 (-)
dedd1 LOC107551690,LOC107717438,LOC107700182,LOC107671190,LOC107582037,LOC107723479 coding downstream 121019 14171168 ~ 14182105 (-)
pou2f2a pou2f2a,pou2f2,LOC107717432,LOC107671217,LOC107551663 coding downstream 150263 14116537 ~ 14152861 (-)
erfl3 erfl3,LOC107582036,LOC107724159,LOC107671192,LOC107551693,LOC107700185,LOC107717433 coding downstream 199844 14060753 ~ 14103280 (-)
vars1 LOC107700174,LOC107717441,LOC107551685,LOC107723495,LOC107671187 coding upstream 10354 14313889 ~ 14324941 (-)
LOC122360758 LOC107700176,LOC107717444,LOC107551680,LOC107671188,LOC107723496,LOC107582045 coding upstream 22123 14325658 ~ 14329605 (-)
ino80e ino80e,LOC107723407,LOC107700176,LOC107551684,LOC107717446,LOC107582046,LOC107671171 coding upstream 24026 14327561 ~ 14334066 (-)
si:dkeyp-77h1.4 si:dkeyp-77h1.4,LOC107717443,LOC107551679,LOC107700178,LOC107723397,LOC107671181,LOC107582048 coding upstream 37129 14340664 ~ 14357370 (-)
mdc1 LOC107717447,LOC107700173,LOC107551678,LOC107723400,LOC107671182,LOC107582047 coding upstream 54018 14357553 ~ 14365755 (-)
G112479 NA non-coding downstream 6552 14292739 ~ 14296572 (-)
G112474 NA non-coding downstream 92185 14210693 ~ 14210939 (-)
G112473 NA non-coding downstream 92591 14208396 ~ 14210533 (-)
G112464 NA non-coding downstream 192662 14110148 ~ 14110462 (-)
G112449 NA non-coding downstream 393388 13909324 ~ 13909736 (-)
G112612 NA non-coding upstream 24417 14327952 ~ 14328203 (-)
G112659 NA non-coding upstream 287827 14591362 ~ 14654150 (-)
LOC122359963 NA non-coding upstream 329679 14633214 ~ 14638332 (-)
G112686 NA non-coding upstream 411681 14715216 ~ 14715491 (-)
G113034 NA non-coding upstream 588505 14892040 ~ 14892395 (-)
G112478 NA other downstream 1505 14234554 ~ 14301619 (-)
zgc:92606 zgc:92606,LOC107724707,LOC107549485,LOC107598403,LOC107672985,LOC107744286,LOC108432344 other downstream 619215 13654060 ~ 13683909 (-)
rxrbb rxrbb,rxrba,LOC107596638,LOC107581542,LOC107752838,LOC107743171,LOC107566635 other downstream 1924675 12363785 ~ 12378449 (-)
LOC122361049 c16h2orf66,LOC107743229 other downstream 2435809 11865680 ~ 11867315 (-)
G111490 si:dkey-12j5.1,LOC107738871,LOC107549224,LOC107689883,LOC107717803,LOC108256403,LOC108426361,LOC107593733 other downstream 2891347 11410678 ~ 11411777 (-)
dicp3.3 NA other upstream 194728 14498263 ~ 14503136 (-)
LOC122359961 riiad1 other upstream 278944 14582479 ~ 14587869 (-)
si:ch211-105c13.3 si:ch211-105c13.3,LOC107673711,LOC107594941,LOC107582067,LOC107677027,LOC107735771 other upstream 595647 14899182 ~ 14904907 (-)
LOC122359907 LOC107594909 other upstream 605085 14908620 ~ 14913646 (-)
si:dkey-246i14.3 si:dkey-246i14.3,efna4,LOC107595001,LOC107714708,LOC107723547,LOC107677033,LOC107582070,LOC108269281 other upstream 667006 14970541 ~ 15015462 (-)

Expression


Co-expression Network