G113039


Basic Information

Item Value
gene id G113039
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056714.1
NCBI id CM032083.1
chromosome length 28146790
location 14946595 ~ 14947384 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU166915
CCTTTGCAGCATTCAGTCCCCCGTGTCCTTAGAAAGCAAGAGCACAGACGGGGTGCACTCTGGGATTTGTAGTTCAGCTAACTCTTCCTCGTAACCCTGAATTCAGGTCACTCGACTGAATGACTCACAAATCAACCCTGTAGTTATTCCGACACATCGATTAGACGCTTATTGCATGGTCGGTTTGGATTTGTAAGCGCATATACCAAGATAACCTTGAGGTTGCGTCAAATGacctgcattttgtttttgctctgcATTGGCTCATTGATATGGTTGAAGATGGTTCAGACAGAAATTAAATTTCTGTCAttgccctcatgtcattccaactgaatgagattttatatatatatatatattagtcagtGCAGTGGGGTTTAATTTAGTGTTATTTTGAACCTCATTGTCTTTCATTATATGGACAAAATGCTAAGTCATGTTTAAAAGGACACAAGTGGAGTAAATTAATgaccaaattttcatttcaaggTGATATGTATCTAGTGTCGGAAATATGGACAAAAAGTGGGAATTATGTGGAAGATTATAGAATATCAAGAGGAAGTAGAGAGAAATGACTAGCCGCCAACTTGCTTGCTCTTAAGTTACCATGGGAGGAGCGTTGAGGACAGACCTCATGCTCCTTATCCGCTTTTTCCCTCCATCCATTGATGcgcttactctctctctctcatccccCA

Function

GO: NA

KEGG:

id description
ko04978 Mineral absorption

RNA

RNA id representative length rna type GC content exon number start site end site
TU166915 True 704 lncRNA 0.40 2 14946595 14947384

Neighbor

gene id symbol gene type direction distance location
LOC122361105 LOC107582131 coding downstream 19699 14926292 ~ 14926896 (-)
pbxip1b LOC107714683,LOC107673634 coding downstream 22078 14913948 ~ 14924517 (-)
s100t LOC107714712,LOC107594934,LOC107673706,LOC107677025,LOC107582066,LOC107723416 coding downstream 47548 14896221 ~ 14899047 (-)
LOC122360979 LOC107673736,LOC107714679,LOC107723515,LOC107677031,LOC107582064,LOC107596123,LOC561423 coding downstream 199970 14727085 ~ 14746625 (-)
LOC122360089 NA coding downstream 227015 14717064 ~ 14719580 (-)
si:dkey-247k7.2 NA coding upstream 199640 15147024 ~ 15150068 (-)
trim46a trim46,trim46a,LOC107714687,LOC107723477,LOC107582073,LOC107595016 coding upstream 204360 15151744 ~ 15163625 (-)
osgin2 osgin2,LOC107723494,LOC107596464,LOC107714693,LOC107582167,LOC107699543 coding upstream 385274 15332658 ~ 15340225 (-)
LOC122360842 NA coding upstream 394947 15342331 ~ 15342771 (-)
LOC122360653 LOC107596174,LOC107714661 coding upstream 408250 15355634 ~ 15362140 (-)
G113034 NA non-coding downstream 54200 14892040 ~ 14892395 (-)
G112686 NA non-coding downstream 231104 14715216 ~ 14715491 (-)
G112659 NA non-coding downstream 292445 14591362 ~ 14654150 (-)
LOC122359963 NA non-coding downstream 308263 14633214 ~ 14638332 (-)
G112612 NA non-coding downstream 618392 14327952 ~ 14328203 (-)
G113073 NA non-coding upstream 163449 15110833 ~ 15197354 (-)
G113090 NA non-coding upstream 217613 15164997 ~ 15165440 (-)
G113092 s100a10b,LOC107714718,LOC107595024,LOC105891828 non-coding upstream 220989 15168373 ~ 15170070 (-)
G113125 NA non-coding upstream 360481 15307865 ~ 15308418 (-)
G113136 NA non-coding upstream 378175 15325559 ~ 15428662 (-)
LOC122359907 LOC107594909 other downstream 32949 14908620 ~ 14913646 (-)
si:ch211-105c13.3 si:ch211-105c13.3,LOC107673711,LOC107594941,LOC107582067,LOC107677027,LOC107735771 other downstream 41688 14899182 ~ 14904907 (-)
LOC122359961 riiad1 other downstream 358726 14582479 ~ 14587869 (-)
dicp3.3 NA other downstream 443459 14498263 ~ 14503136 (-)
G112478 NA other downstream 644976 14234554 ~ 14301619 (-)
si:dkey-246i14.3 si:dkey-246i14.3,efna4,LOC107595001,LOC107714708,LOC107723547,LOC107677033,LOC107582070,LOC108269281 other upstream 23157 14970541 ~ 15015462 (-)
rps27.2 rps27.2,LOC107699547,LOC107582081,LOC106605923,LOC108429942,LOC107589412,LOC106598061 other upstream 354490 15301874 ~ 15306611 (-)
LOC122360651 LOC107596174,LOC107714662,LOC107714661 other upstream 417804 15365188 ~ 15375304 (-)
rps19 rps19,LOC107657656,LOC103354132,LOC100689943 other upstream 521096 15468480 ~ 15496413 (-)
fxyd6l si:dkey-56f14.4,fxyd6l,LOC107570838,LOC107657592,LOC107723383,LOC107570836,LOC107714713,LOC107699456,LOC107657664,LOC107723441 other upstream 712368 15659752 ~ 15672151 (-)

Expression


Co-expression Network