G9168


Basic Information

Item Value
gene id G9168
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000000
NCBI id null
chromosome length 19091038
location 14105139 ~ 14108116 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU10131
CAGAACCATGAGGAGATGCACATGGACGTGTCTGATAGGAAAGAACATTTGCTTGAAAAAATGTCTCCAAATGTCTATTAGATTTAGAAGGCGCACACGGAGCTGTACCTGAGATGGGGGGTGTGTCCGTTCCACTCCTCACACTCCTCCTGCAGGGACTCTGAGCGGCTGCTGACTCTCCCCTCATACAGCAGTTCATCCACAGAGTTAAAGAGCTGACGCACATGCTGAGTATTCGCCCGCTCAAACTCCTGCATGCAAGCCAAACCAAACACTAAAACATTCAATGAACATACAGAGAATCCTACAGCTGAGGAGATGGTGCTAGCAGCTAGTGATGCATTTGCAAAAATAACAGTTAGACTTATGCACTAAAAACAGTGAGAGGCTTTAAAATGATAAACAGAAAAATGCCCTGTTGTAGATGTCTCTTATTTTTCAAGTATTTATTACATGGTACATTTTAATTCTAATAAATGTGTTGTACGCTATTCAGAAATTAACTGAGAATTCATTTTACATTCCAATTCAATTAATGATTTTCAACTGATGTAGCAAACAGAATACATAAATCTAATAAGAATTGGAATTTATATATATAAATATATATATATATATAAACCATAAATATGTCATACACATAATATATTTTCATAATACAAATAATACATTTTCAAAAATTATTTTAAATATTAATATTCAGTGTTTTTTTCTCTTTTACATGGACCTCTTAAATACTTGATTCTGATTCAACATCATTCAACATGTTTTATATAAATAAAATATAGAACACTAATCCATTCAATTATTTCAACTCAAGTTAATATTTCAATATTTTTCAATTCAGTAAATTCCCCTGTCATTCCAATTCAAATTCCAATTAAGTTTCCTCTGGAGTGTGGCAAATTAAATTCAAGCTCTCATGAACAAAAATATCTAAAAAAAAAAAATCTCATTCATTGAAATGGAGTTGATTCTAAAATTCAAAATGTTGCTCAACCCTGATGAAAAGGGTAAAAAAAAAAAAAAAACATCTGGAAGAAGAACAAAGGCATTACATCATATCTCCAGGAGCAGATGGAGCTGTGTTCTGTGGAGAGACCGGGGCCAGTGCCTGGGCTGCTGGAGCGGGAGGGGAGGTGGCTCACGGGGGTAGTGCCACCGGCAGATGACTGTCCACATGATGAGATACTACCAATGAAGAAATGAGGCATTACTCCAAGGACTCTGTTTTCTATTATCAAATGTCATTAATATGTAGTAGAGCTGAACCCTTACAATAAGTTCTGAATATTCTGAAACAGAAATGATTGCATTACCTGAGGCCACTGTTTGGGACCCTGTTGACACTTCTGGTAAATGGGGCAGGCACTGCGTTAATGCTTTTGTTAGGTTCGCTGAGCAGCTTTTTCCTAATGCATGATATGGGAATAAGAATGAAGATGGGTCCATCCAGTTAATGAAAATAGTCCATTTATGCCTTGTACAGAACACATGCTGCAGTGATACATTCAGAGGCATTTATTAAACTGTAAAACACAATAAGCATCCTTTGGTTAACATGCTACACTTCATCTAAAACTATTTTAAAATGGAATCTGCTAATTGTTTTATAATTATTATGCATGCAGCTATTATAACCTCATATTATTTTAGAGACTACATAACAACATATATTAGCTGAAAGAGGGACTATTTAAAATGAACTAATCAAGGCAAAGAGCTTTTGTTATGAAAAGCATATCCAGCTGGAGGTATAAGAGGGTCACATGATGCTGTCGCCTTCAAGCTTTCACTCTTTGTCTCAAACTGCCTCTAATCTATCAGACAATTATGTCATGAATAATTTAAACAGTACAAGATCAAAGTACAATATACAGGCATGTTGGAGTGTCACATTTATCACTATGACAACAAGAAGCTTTATCTGTAAATGTTATATAGTAAAATAGAGAACAGAGTAATTTTTAATTTTTTAAACATGCTTATTTTACATTGCTTTATATCATTTAAATATCTCTTTTTGTCTCTTAAGATTTGTCACCATTCAGTATCAGTGTTTATCGAGACCTCTGTGAATAAAATGAGTGTTGGTTATAACTGTAACCCACAAAAAATTAGTTTAAAAAGATTATTAAAAACAAAATGACAGCATATGTCATATACATGACAATTGTAATTTGATTTTTGGAGTTATAACTTGCATACTTAATACAAGACCTTGTAGATGT
>TU10133
CAGAACCATGAGGAGATGCACATGGACGTGTCTGATAGGAAAGAACATTTGCTTGAAAAAATGTCTCCAAATGTCTATTAGATTTAGAAGGCGCACACGGAGCTGTACCTGAGATGGGGGGTGTGTCCGTTCCACTCCTCACACTCCTCCTGCAGGGACTCTGAGCGGCTGCTGACTCTCCCCTCATACAGCAGTTCATCCACAGAGTTAAAGAGCTGACGCACATGCTGAGTATTCGCCCGCTCAAACTCCTGCATGCAAGCCAAACCAAACACTAAAACATTCAATGAACATACAGAGAATCCTACAGCTGAGGAGATGGTGCTAGCAGCTAGTGATGCATTTGCAAAAATAACAGTTAGACTTATGCACTAAAAACAGTGAGAGGCTTTAAAATGATAAACAGAAAAATGCCCTGTTGTAGATGTCTCTTATTTTTCAAGTATTTATTACATGGTACATTTTAATTCTAATAAATGTGTTGTACGCTATTCAGAAATTAACTGAGAATTCATTTTACATTCCAATTCAATTAATGATTTTCAACTGATGTAGC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU10131 False 2231 lncRNA 0.34 2 14105139 14108116
TU10133 True 556 lncRNA 0.41 2 14105139 14106441

Neighbor

gene id symbol gene type direction distance location
CI01000000_14018908_14032529 MTNR1AA, MTNR1AB, MTNR1A coding upstream 72610 14018908 ~ 14032529 (+)
CI01000000_13971301_14008905 FAT1B coding upstream 94781 13970387 ~ 14010358 (+)
CI01000000_13934872_13936612 NA coding upstream 168192 13934872 ~ 13936947 (+)
CI01000000_13926605_13928231 LECT2L coding upstream 176798 13926519 ~ 13928341 (+)
CI01000000_13923608_13925296 NA coding upstream 179559 13923608 ~ 13925580 (+)
CI01000000_14143399_14175045 NA coding downstream 35283 14127685 ~ 14175354 (+)
CI01000000_14178546_14189186 NA coding downstream 70247 14178363 ~ 14189331 (+)
CI01000000_14718151_14741998 NA coding downstream 609689 14717805 ~ 14742191 (+)
CI01000000_14801105_14802738 INSB coding downstream 692758 14800874 ~ 14802774 (+)
CI01000000_14837947_14838141 NA coding downstream 729786 14837902 ~ 14838322 (+)
G9159 NA non-coding upstream 22621 14082092 ~ 14082518 (+)
G8920 NA non-coding upstream 136258 13968497 ~ 13968881 (+)
G8918 NA non-coding upstream 139364 13965446 ~ 13965775 (+)
G8912 NA non-coding upstream 162443 13942384 ~ 13942696 (+)
G8909 NA non-coding upstream 180828 13924088 ~ 13924311 (+)
G9195 NA non-coding downstream 103172 14211288 ~ 14212651 (+)
G9201 NA non-coding downstream 106908 14215024 ~ 14234941 (+)
G9226 NA non-coding downstream 152095 14260211 ~ 14322271 (+)
G9265 NA non-coding downstream 243949 14352065 ~ 14352284 (+)
G7522 NA other upstream 1926131 12178369 ~ 12179008 (+)
G7514 NA other upstream 1968131 12136522 ~ 12137008 (+)
G7153 NA other upstream 2859506 11244457 ~ 11245633 (+)
G7018 NA other upstream 3124267 10978489 ~ 10980872 (+)
G6820 NA other upstream 3672121 10427223 ~ 10433018 (+)
G10201 NA other downstream 1822150 15930266 ~ 15930562 (+)
CI01000000_17339270_17345013 CXCL14, CXL14 other downstream 3231038 17339154 ~ 17346200 (+)
G11465 NA other downstream 3775837 17883953 ~ 17887462 (+)
G11521 NA other downstream 3924623 18032739 ~ 18164112 (+)

Expression


Co-expression Network