G113090


Basic Information

Item Value
gene id G113090
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056714.1
NCBI id CM032083.1
chromosome length 28146790
location 15164997 ~ 15165440 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU166979
AAGCATATTCTTTCTCGCACTTACTCTCCGGGAAGATTTTGGCTTGGAAGCCTTTGCCAAAGACAAGGTTCTCCAGGTTATTGAAACAGTAAGAGAGCAGACAAACAGCACTGATCCCAGGAATCCTCCCAGGATAGTCAGCCACTCCGAAGAGCCCAGCTGCCGGCTGAACATCTGCATTCCTGCAAACACCAGCACTGACAGCAGACTGGACAAAACCAGGGACGTGCTTGTGTTCACCGCTatgaaaacagagagaaagactggGTGAAAGACTGCGTCTAAAAATCTAAGAAAACCATTACCAATCATGCTAGTAATACTTCTATTTtactgata

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU166979 True 339 lncRNA 0.46 2 15164997 15165440

Neighbor

gene id symbol gene type direction distance location
trim46a trim46,trim46a,LOC107714687,LOC107723477,LOC107582073,LOC107595016 coding downstream 1372 15151744 ~ 15163625 (-)
si:dkey-247k7.2 NA coding downstream 14929 15147024 ~ 15150068 (-)
shc1 shc1,LOC107714692,LOC107677023,LOC107723450 coding downstream 207762 14927037 ~ 14957235 (-)
LOC122361105 LOC107582131 coding downstream 238101 14926292 ~ 14926896 (-)
pbxip1b LOC107714683,LOC107673634 coding downstream 240480 14913948 ~ 14924517 (-)
osgin2 osgin2,LOC107723494,LOC107596464,LOC107714693,LOC107582167,LOC107699543 coding upstream 167218 15332658 ~ 15340225 (-)
LOC122360842 NA coding upstream 176891 15342331 ~ 15342771 (-)
LOC122360653 LOC107596174,LOC107714661 coding upstream 190194 15355634 ~ 15362140 (-)
bcam LOC107714691,LOC107595169,LOC107699531,LOC107657655,LOC107723516 coding upstream 265380 15430820 ~ 15476204 (-)
cadm4 cadm4,LOC107714698,LOC107657657,LOC107699529,LOC107582091,LOC107723444 coding upstream 340619 15506059 ~ 15627109 (-)
G113039 NA non-coding downstream 217613 14946595 ~ 14947384 (-)
G113034 NA non-coding downstream 272602 14892040 ~ 14892395 (-)
G112686 NA non-coding downstream 449506 14715216 ~ 14715491 (-)
G112659 NA non-coding downstream 510847 14591362 ~ 14654150 (-)
G113092 s100a10b,LOC107714718,LOC107595024,LOC105891828 non-coding upstream 2933 15168373 ~ 15170070 (-)
G113125 NA non-coding upstream 142425 15307865 ~ 15308418 (-)
G113136 NA non-coding upstream 160119 15325559 ~ 15428662 (-)
G113147 NA non-coding upstream 181733 15347173 ~ 15348215 (-)
G113149 LOC107723544,LOC107714703,LOC107657612,LOC107723413,LOC107699537,LOC107596479,LOC107596180,LOC107595112,LOC107596500,LOC107714702 non-coding upstream 215991 15381431 ~ 15397665 (-)
si:dkey-246i14.3 si:dkey-246i14.3,efna4,LOC107595001,LOC107714708,LOC107723547,LOC107677033,LOC107582070,LOC108269281 other downstream 149535 14970541 ~ 15015462 (-)
LOC122359907 LOC107594909 other downstream 251351 14908620 ~ 14913646 (-)
si:ch211-105c13.3 si:ch211-105c13.3,LOC107673711,LOC107594941,LOC107582067,LOC107677027,LOC107735771 other downstream 260090 14899182 ~ 14904907 (-)
LOC122359961 riiad1 other downstream 577128 14582479 ~ 14587869 (-)
dicp3.3 NA other downstream 661861 14498263 ~ 14503136 (-)
rps27.2 rps27.2,LOC107699547,LOC107582081,LOC106605923,LOC108429942,LOC107589412,LOC106598061 other upstream 136434 15301874 ~ 15306611 (-)
LOC122360651 LOC107596174,LOC107714662,LOC107714661 other upstream 199748 15365188 ~ 15375304 (-)
rps19 rps19,LOC107657656,LOC103354132,LOC100689943 other upstream 303040 15468480 ~ 15496413 (-)
fxyd6l si:dkey-56f14.4,fxyd6l,LOC107570838,LOC107657592,LOC107723383,LOC107570836,LOC107714713,LOC107699456,LOC107657664,LOC107723441 other upstream 494312 15659752 ~ 15672151 (-)
G113203 fpr1,LOC107714672,LOC107699476,LOC107593626,LOC107657616,LOC107595349,LOC107723415,LOC108429924,LOC108265369 other upstream 651539 15816979 ~ 15819086 (-)

Expression


Co-expression Network