G113139


Basic Information

Item Value
gene id G113139
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056714.1
NCBI id CM032083.1
chromosome length 28146790
location 15407948 ~ 15412843 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU167055
CTGTACCGTTatcaatgtttattaatatggtgttaaaaagaaacatacagaaaaataactatattaatTTATAGTCTTCATATACATTTGGTCTTCAGTTGTGCATTAATGGCATGACTACATTGGAGATATGATTCGGTTTATTAATTCCACAACGTCTATATCCTGAAAGTCGCGATCGGCCCTTGAAGAATTGCTTTACTTATTGTTCTTGGGTTGCTCTGAAGCTGGGCATTCTGCTTTTCACTCTATCCCACAGGGAATTTGCATGATCTTTTGCCCACTCCACGTAAGGGTCAGCTACAGGTTTGAGATGTTCCTCATAGTACATGCCAGCAAAGCCAGCCACTGTGCTGCCAACGTTTAGAACTTTAGTCTTTGTGTCcctgcaaaaaaacacacaaatgaacaCAGAAGTAGAACAAAATGTACAACAAAATGTTCACTcgttaaatgcatgcattggGCGAATTTTACGTGAGAATGTAGCAGCTGATGAACAACATACCTGTATGCTTGCTTTGCTCTCTCAAGAAGTCCGGCATTGTTTGGAGCAGAAGTGGGCAATGGCTCGGATGATGTCAAACGCACTAAGGAACCATAGATTTAAAGACTTCTGTTGCATGATAGCGATATTTCAGTTCATATATTGAGATACATATAAatcagttaataaaatatacGTGCATATTTAAATCCAGACCTTGCAATGTCACAACcagaacaaagaaaatcaaTCTGGACATCTGGAAGAACAATCAACTGAATTAGATTAGATCATCACATTACTATTTAGATCTGGAATTGCTTACATGTACATTATTACAGTAAACCTTAAACatatatagtaaatatgtaCCTTTGGCGTTAATGCAGCGGAAGCAACTGTAGTCGTTTTTCTTCAGAAGAAGTACCAGCTGGATATCAGAGACTtttgtaaagctttttttttttttttttttttttttttttttttttttttttttttttttg

Function

GO: NA

KEGG:

id description
ko04610 Complement and coagulation cascades
ko05150 Staphylococcus aureus infection

RNA

RNA id representative length rna type GC content exon number start site end site
TU167055 True 993 lncRNA 0.35 2 15407948 15412843

Neighbor

gene id symbol gene type direction distance location
LOC122360653 LOC107596174,LOC107714661 coding downstream 45808 15355634 ~ 15362140 (-)
LOC122360842 NA coding downstream 65177 15342331 ~ 15342771 (-)
osgin2 osgin2,LOC107723494,LOC107596464,LOC107714693,LOC107582167,LOC107699543 coding downstream 67723 15332658 ~ 15340225 (-)
trim46a trim46,trim46a,LOC107714687,LOC107723477,LOC107582073,LOC107595016 coding downstream 244323 15151744 ~ 15163625 (-)
si:dkey-247k7.2 NA coding downstream 257880 15147024 ~ 15150068 (-)
bcam LOC107714691,LOC107595169,LOC107699531,LOC107657655,LOC107723516 coding upstream 17977 15430820 ~ 15476204 (-)
cadm4 cadm4,LOC107714698,LOC107657657,LOC107699529,LOC107582091,LOC107723444 coding upstream 93216 15506059 ~ 15627109 (-)
si:ch211-79k12.1 LOC107699527,LOC107714699,LOC107723562,LOC107595219,LOC107657658,LOC107582092 coding upstream 217698 15630541 ~ 15639888 (-)
si:ch211-79k12.2 LOC107714696,LOC107699526,LOC107595229,LOC107657659,LOC107723573 coding upstream 228331 15641174 ~ 15646291 (-)
LOC122360742 LOC107723437,LOC107570834,LOC107657661,LOC107595282,LOC107714733 coding upstream 275654 15688497 ~ 15693259 (-)
G113138 apoeb,LOC107714700,LOC107699536,LOC107723536,LOC107595129,LOC107657653 non-coding downstream 1865 15402327 ~ 15406083 (-)
G113149 LOC107723544,LOC107714703,LOC107657612,LOC107723413,LOC107699537,LOC107596479,LOC107596180,LOC107595112,LOC107596500,LOC107714702 non-coding downstream 10283 15381431 ~ 15397665 (-)
G113147 NA non-coding downstream 59733 15347173 ~ 15348215 (-)
G113125 NA non-coding downstream 99530 15307865 ~ 15308418 (-)
G113073 NA non-coding downstream 210594 15110833 ~ 15197354 (-)
G113151 NA non-coding upstream 6063 15418906 ~ 15420427 (-)
G113179 NA non-coding upstream 292980 15705823 ~ 15706059 (-)
G113168 ywhabl,LOC107595301,LOC107570839,LOC107723438 non-coding upstream 296895 15709738 ~ 15717886 (-)
G113187 NA non-coding upstream 350626 15763469 ~ 15763745 (-)
G113232 NA non-coding upstream 493390 15906233 ~ 15906830 (-)
LOC122360651 LOC107596174,LOC107714662,LOC107714661 other downstream 32644 15365188 ~ 15375304 (-)
rps27.2 rps27.2,LOC107699547,LOC107582081,LOC106605923,LOC108429942,LOC107589412,LOC106598061 other downstream 101337 15301874 ~ 15306611 (-)
si:dkey-246i14.3 si:dkey-246i14.3,efna4,LOC107595001,LOC107714708,LOC107723547,LOC107677033,LOC107582070,LOC108269281 other downstream 392486 14970541 ~ 15015462 (-)
LOC122359907 LOC107594909 other downstream 494302 14908620 ~ 14913646 (-)
si:ch211-105c13.3 si:ch211-105c13.3,LOC107673711,LOC107594941,LOC107582067,LOC107677027,LOC107735771 other downstream 503041 14899182 ~ 14904907 (-)
rps19 rps19,LOC107657656,LOC103354132,LOC100689943 other upstream 55637 15468480 ~ 15496413 (-)
fxyd6l si:dkey-56f14.4,fxyd6l,LOC107570838,LOC107657592,LOC107723383,LOC107570836,LOC107714713,LOC107699456,LOC107657664,LOC107723441 other upstream 246909 15659752 ~ 15672151 (-)
G113203 fpr1,LOC107714672,LOC107699476,LOC107593626,LOC107657616,LOC107595349,LOC107723415,LOC108429924,LOC108265369 other upstream 404136 15816979 ~ 15819086 (-)
G113220 LOC107714743,LOC107699517,LOC107595378,LOC107657670,LOC107593630,LOC107723558 other upstream 444756 15857599 ~ 15861893 (-)
adnp2a LOC107714821,LOC107699502,LOC107723537,LOC107595567,LOC107657688 other upstream 588470 16001313 ~ 16006471 (-)

Expression


Co-expression Network