G113244 (LOC107715075,LOC107699469,LOC107595516,LOC107723556,LOC107593640,LOC107657683)


Basic Information

Item Value
gene id G113244
gene name LOC107715075,LOC107699469,LOC107595516,LOC107723556,LOC107593640,LOC107657683
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056714.1
NCBI id CM032083.1
chromosome length 28146790
location 15964758 ~ 15967193 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU167227
TATTAAGTTAAGTTATATATACAAACGTTATTGAAAGACATAATCATCACAAAAAGCTTAAGGCAACATATGTACTTTGATACATTTctgttgaacaaataaatattgatgTACCCATTAAAACATGAGAAACAGTCAGTAACAGTCATGTTAAGTAACAATCAAGGCAGCATCAAATATCATTACTACCTCAAGGCACACAGGTTTCGACAAATCCACGATAAAGGATAATGGTGTGTTTGGCAGCGTCTGAGCACTGGTCCGTTTAAAGCATATACTATGCTTTTATCGTCCGATCACAGGTCAGGCCTGGTAAGGCGAGTTGACAATGTGCAGCTCTCCAAAACTGTGAGTTTGCCCTCCTGCCTTTTCACACGTATTAACCAATCACTTCTGGCTCAGTTTCTGTGTCCTCTTCAAACTCCGAGTACTCTGTGACTGTCATACTGTTATGGTCGCCTATAATTACATACTCTATGTTGGATCTCTCCATGTGAACGCTGTTGCCACTTATTGTGTCCTGCACTGGGAGCAGTTGATCTCTGCTCTCAGTATCCGGCATTTCATTCactgtttgtaaaaaatCATTGCTTGCATCATTTTGAGCAAGCAAAGAATGCTGGTCACAGGTAATGCATTGGCGATTGTTGTTTCCAATAATACAGTTGGTCAGGGAAgagttttgtatgtttataaTACAAGGTGTAAATTGCAGTTTTTCTGAAAAgagaagacaaaaaacaaaagacatcaATATGAGCAAAGGTACAGCACTGCATCAAAGGAATGTGGGACAGCAAAACAAGGCTCTTAGtcatgcatgcttttaaaaaataaagtatgcgGTTTTTTCATAGCAATACCTGTAGTACTTAGTGGGTGAGGTAATCTTTCAAACAAGAATGAGACAACAACAGGAAGTAGAATTGTAACCACTGAACAGgaagtgataaaaaaatgtctccACTGACCCTGTTGAaaaaccagcatatgctggttaggtaagttttgaagcatggctggtttgagctggtttaacaTGGTCCTTGGCTGGTCCTAAGCAGCTACCTTAAGTCATAAGCAGCTCAGGACCATTTAAGGAGCAGCTTGTACTAGCTCAAACCAgcagccatgcttcaaaacatacctaaccagcatatgctggatTTTCCAACAAGGGATACCCCTGATATTTCCTAAAACAACAGAGCACAAATGAAATAGTATACGACAAGATATATCACCGGTAAGTGAATATGCAAAGATATCTACCTGAAAGAGGAATTTGCTCTGCATGTTGATGGTCCTCTGGATTAAATTGTGCTGAATGATAGCATGTCACAAGAAAAGAAGACATAGAAATAAATGGACAAATGAGAAACGAATAAACAATCCAGACTGtggcaaattaaatatatatatacatatatcattaATTTTTGATAGATTGACCAACCTGGGAATCCCGTAACATTCTCGTACAACACTGGGTCACAAATCCCAAGGCATGTGAAGAACAAACTGCATGCACTTTGACCTTTTTTAATGACAATCTGCATCAGCCTGGAGGCTTTCTGCATGTCCGTGGGCTGGGACGTAATAACCTGTTCTTCGTACACCGTGATCGTGCGAGATCGGGACAAACAGCTGGACATCCTTTGAACCAAGCACCCAGTCATACACTTACTTAGGGAGCCCAAATAGCGTTGTAATTGTTTAT

Function

NR:

description
PREDICTED: uncharacterized protein LOC107715075

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU167227 True 1720 lncRNA 0.40 2 15964758 15967193

Neighbor

gene id symbol gene type direction distance location
prelid3a prelid3a,LOC107715058,LOC107723525 coding downstream 1050 15959669 ~ 15963708 (-)
lratd2b zgc:110182,LOC107715046,LOC107699471,LOC107723393,LOC107593723,LOC107595500,LOC107657619 coding downstream 25868 15936647 ~ 15938890 (-)
prss1 try,LOC107714673,LOC107699515,LOC107595397,LOC107657672,LOC107723506,LOC107593633 coding downstream 95547 15867304 ~ 15869211 (-)
has1 has1,LOC107714739,LOC107723422,LOC107657615,LOC107699477 coding downstream 160056 15799086 ~ 15804702 (-)
si:dkey-79d12.5 si:dkey-79d12.5,LOC107714671,LOC107595341,LOC107699478,LOC107657668,LOC107723514,LOC107570843 coding downstream 205091 15754181 ~ 15759667 (-)
rbfa LOC107699468,LOC107715083,LOC107596252 coding upstream 31119 15998312 ~ 16000648 (-)
LOC122360718 jarid2a,LOC107714830,LOC107595576,LOC107699452,LOC107593646,LOC107657689,LOC107723487 coding upstream 103346 16070539 ~ 16103655 (-)
LOC122361095 LOC107596551,LOC107699467,LOC107715090,LOC107657620,LOC107578647 coding upstream 181770 16148963 ~ 16152079 (-)
LOC122361096 zgc:136493,LOC107699466,LOC107714862,LOC107596560 coding upstream 185311 16152504 ~ 16154388 (-)
dtnbp1a LOC107723533,LOC107657692,LOC107714847,LOC107593648 coding upstream 230526 16197719 ~ 16210633 (-)
G113234 NA non-coding downstream 6094 15929222 ~ 15958664 (-)
G113236 klhl38b,LOC107723565,LOC107657680,LOC107593636 non-coding downstream 18075 15911312 ~ 15946683 (-)
G113231 LOC107714685,LOC107699511,LOC107657677,LOC107723481 non-coding downstream 56085 15907099 ~ 15908673 (-)
G113232 NA non-coding downstream 57928 15906233 ~ 15906830 (-)
G113187 NA non-coding downstream 201013 15763469 ~ 15763745 (-)
LOC122360541 NA non-coding upstream 17548 15984741 ~ 15986184 (-)
LOC122361072 LOC107723533,LOC107657692 non-coding upstream 98973 16066166 ~ 16067545 (-)
G113281 NA non-coding upstream 153133 16120326 ~ 16196677 (-)
G113300 NA non-coding upstream 223669 16190862 ~ 16192689 (-)
G113280 jarid2a,LOC107593646,LOC107657689,LOC107714830,LOC107699452,LOC107595576 non-coding upstream 226836 16194029 ~ 16195896 (-)
G113220 LOC107714743,LOC107699517,LOC107595378,LOC107657670,LOC107593630,LOC107723558 other downstream 102865 15857599 ~ 15861893 (-)
G113203 fpr1,LOC107714672,LOC107699476,LOC107593626,LOC107657616,LOC107595349,LOC107723415,LOC108429924,LOC108265369 other downstream 145672 15816979 ~ 15819086 (-)
fxyd6l si:dkey-56f14.4,fxyd6l,LOC107570838,LOC107657592,LOC107723383,LOC107570836,LOC107714713,LOC107699456,LOC107657664,LOC107723441 other downstream 292607 15659752 ~ 15672151 (-)
rps19 rps19,LOC107657656,LOC103354132,LOC100689943 other downstream 468345 15468480 ~ 15496413 (-)
LOC122360651 LOC107596174,LOC107714662,LOC107714661 other downstream 589454 15365188 ~ 15375304 (-)
adnp2a LOC107714821,LOC107699502,LOC107723537,LOC107595567,LOC107657688 other upstream 34120 16001313 ~ 16006471 (-)
G113275 zgc:136493,LOC107699466,LOC107714862,LOC107596560 other upstream 45771 16012964 ~ 16013751 (-)
G113267 LOC107699468,LOC107715083,LOC107596252 other upstream 172126 16139319 ~ 16141235 (-)
atxn1b atxn1b,LOC107699498,LOC107595586,LOC107723489,LOC107593649,LOC107657690,LOC107736225 other upstream 251468 16218661 ~ 16228466 (-)
fam8a1b fam8a1,fam8a1b,LOC107715098,LOC107593650,LOC107595671,LOC107723574,LOC107657622 other upstream 265779 16232972 ~ 16239506 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) CI01000027_05805062_05805690 NA coding CI01000027 null 5805062 ~ 5806023 (+)