G113267 (LOC107699468,LOC107715083,LOC107596252)


Basic Information

Item Value
gene id G113267
gene name LOC107699468,LOC107715083,LOC107596252
gene type misc
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056714.1
NCBI id CM032083.1
chromosome length 28146790
location 16139319 ~ 16141235 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU167253
GATGCTGAAACTAGCGTGAGTGTAAAGATATATTAAGCTGGTGATCATGCTGGCTGTCAGAAGAGTTGTTTGCTCCAAAGACTGCACAATTAGTCGATATACGACGGCATTAACCAGTGTGATCCATAAAATGACAGTCCGGCCGGAGAGACAGAGTTTGTCCTTGGGTGGTATGTTGAAAGAAAGTAACGTTGGTATTCATAGCTCAGCCTGTCTGTCTGGAGGCAATAAACTGATGAAGATGTTGAACAAAAAGAAGAAGAAACAATGGTATGACTCTCCTCCGCAGGCCTCAGCGGTCAGTCAACTCAGCTTTCTGAAACCATCAAAGCGAAGTAAAGAGGACAGTGTTCGTGTGAGGACTCTCAATATCATCATCTACAAAGCAGTGGTGGACTTGCTGAGCTCCTATGAGCTCAACTCAGAGATCAGTTCCCACAGTGTGCAGATCTCCAAAGTTTCACTGTCACCAGATTTCTCTGCTTGCCGAATATACTGGAAGACGAGTCAGTCAGCTCAACAAGACAGCCATATTCAGCaggctttaaataaatgtgctcCTCGCATACGGCACCTTCTGATCTCTCACCAAATCCTTGGCAATGTTCCGCCTGTGGTTTTAATCAGAGACAAACAATATGCTGCTGTCACTGAAATCGACAACCTTCTCAAGAAGGCAGATTTTGGTCTAGATGAAGATAACATAAATCATTTATCTACCAACAATGTCGGGGCCAGACTGCAGCTGATGGAAtctgaagacatgaaaagaCCTGTTTTGTT
>TU167254
GATGCTGAAACTAGCGTGAGTGTAAAGATATATTAAGCTGGTGATCATGCTGGCTGTCAGAAGAGTTGTTTGCTCCAAAGACTGCACAATTAGTCGATATACGACGGCATTAACCAGTGTGATCCATAAAATGACAGTCCGGCCGGAGAGACAGAGTTTGTCCTTGGGTGGAAGAAACAATGGTATGACTCTCCTCCGCAGGCCTCAGCGGTCAGTCAACTCAGCTTTCTGAAACCATCAAAGCGAAGTAAAGAGGACAGTGTTCGTGTGAGGACTCTCAATATCATCATCTACAAAGCAGTGGTGGACTTGCTGAGCTCCTATGAGCTCAACTCAGAGATCAGTTCCCACAGTGTGCAGATCTCCAAAGTTTCACTGTCACCAGATTTCTCTGCTTGCCGAATATACTGGAAGACGAGTCAGTCAGCTCAACAAGACAGCCATATTCAGCaggctttaaataaatgtgctcCTCGCATACGGCACCTTCTGATCTCTCACCAAATCCTTGGCAATGTTCCGCCTGTGGTTTTAATCAGAGACAAACAATATGCTGCTGTCACTGAAATCGACAACCTTCTCAAGAAGGCAGATTTTGGTCTAGATGAAGATAACATAAATCATTTATCTACCAACAATGTCGGGTAAGAAGAATTTAGTTCTAATAAACTaaatcaatagtt

Function

NR:

description
PREDICTED: putative ribosome-binding factor A, mitochondrial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU167253 True 783 TUCP 0.44 7 16139319 16141235
TU167254 False 683 lncRNA 0.43 6 16139412 16141235

Neighbor

gene id symbol gene type direction distance location
LOC122360718 jarid2a,LOC107714830,LOC107595576,LOC107699452,LOC107593646,LOC107657689,LOC107723487 coding downstream 35664 16070539 ~ 16103655 (-)
rbfa LOC107699468,LOC107715083,LOC107596252 coding downstream 138671 15998312 ~ 16000648 (-)
prelid3a prelid3a,LOC107715058,LOC107723525 coding downstream 175611 15959669 ~ 15963708 (-)
lratd2b zgc:110182,LOC107715046,LOC107699471,LOC107723393,LOC107593723,LOC107595500,LOC107657619 coding downstream 200429 15936647 ~ 15938890 (-)
prss1 try,LOC107714673,LOC107699515,LOC107595397,LOC107657672,LOC107723506,LOC107593633 coding downstream 270108 15867304 ~ 15869211 (-)
LOC122361095 LOC107596551,LOC107699467,LOC107715090,LOC107657620,LOC107578647 coding upstream 7728 16148963 ~ 16152079 (-)
LOC122361096 zgc:136493,LOC107699466,LOC107714862,LOC107596560 coding upstream 11269 16152504 ~ 16154388 (-)
dtnbp1a LOC107723533,LOC107657692,LOC107714847,LOC107593648 coding upstream 56484 16197719 ~ 16210633 (-)
zgc:110410 zgc:110410,LOC107723576,LOC107657623,LOC107593651 coding upstream 98719 16239954 ~ 16243472 (-)
derl1 derl1,LOC107593655,LOC107657695,LOC107714924,LOC107736822,LOC107699495,LOC107595682 coding upstream 115247 16256482 ~ 16264542 (-)
LOC122361072 LOC107723533,LOC107657692 non-coding downstream 71774 16066166 ~ 16067545 (-)
LOC122360541 NA non-coding downstream 153135 15984741 ~ 15986184 (-)
G113244 LOC107715075,LOC107699469,LOC107595516,LOC107723556,LOC107593640,LOC107657683 non-coding downstream 172126 15964758 ~ 15967193 (-)
G113234 NA non-coding downstream 180655 15929222 ~ 15958664 (-)
G113236 klhl38b,LOC107723565,LOC107657680,LOC107593636 non-coding downstream 192636 15911312 ~ 15946683 (-)
G113300 NA non-coding upstream 49627 16190862 ~ 16192689 (-)
G113280 jarid2a,LOC107593646,LOC107657689,LOC107714830,LOC107699452,LOC107595576 non-coding upstream 52794 16194029 ~ 16195896 (-)
G113325 prss59.1,LOC107595716,LOC107739933,LOC107657703,LOC107735769,LOC107699485,LOC107593705,LOC101066992,LOC108431067,LOC102234122 non-coding upstream 211035 16352270 ~ 16357623 (-)
LOC122360769 NA non-coding upstream 346883 16488118 ~ 16494739 (-)
G113405 NA non-coding upstream 411373 16552608 ~ 16553858 (-)
G113275 zgc:136493,LOC107699466,LOC107714862,LOC107596560 other downstream 125568 16012964 ~ 16013751 (-)
adnp2a LOC107714821,LOC107699502,LOC107723537,LOC107595567,LOC107657688 other downstream 132848 16001313 ~ 16006471 (-)
G113220 LOC107714743,LOC107699517,LOC107595378,LOC107657670,LOC107593630,LOC107723558 other downstream 277426 15857599 ~ 15861893 (-)
G113203 fpr1,LOC107714672,LOC107699476,LOC107593626,LOC107657616,LOC107595349,LOC107723415,LOC108429924,LOC108265369 other downstream 320233 15816979 ~ 15819086 (-)
fxyd6l si:dkey-56f14.4,fxyd6l,LOC107570838,LOC107657592,LOC107723383,LOC107570836,LOC107714713,LOC107699456,LOC107657664,LOC107723441 other downstream 467168 15659752 ~ 15672151 (-)
atxn1b atxn1b,LOC107699498,LOC107595586,LOC107723489,LOC107593649,LOC107657690,LOC107736225 other upstream 77426 16218661 ~ 16228466 (-)
fam8a1b fam8a1,fam8a1b,LOC107715098,LOC107593650,LOC107595671,LOC107723574,LOC107657622 other upstream 91737 16232972 ~ 16239506 (-)
esrp1 esrp1,LOC107687807,LOC107706288,LOC107593677,LOC107657715,LOC107723447,LOC107706528,LOC107595837,LOC107687825,LOC107657630,LOC107723411,LOC107593711 other upstream 444849 16586084 ~ 16682178 (-)
onecutl onecutl,LOC107741751,LOC107663311,LOC107689849,LOC107732477 other upstream 1671135 17812370 ~ 17830977 (-)
lmna lmna,LOC107704890,LOC107598000,LOC107671682,LOC107587813,LOC107741735,LOC107723101 other upstream 2054236 18195471 ~ 18239269 (-)

Expression


Co-expression Network