LOC122360769


Basic Information

Item Value
gene id LOC122360769
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056714.1
NCBI id CM032083.1
chromosome length 28146790
location 16488118 ~ 16494739 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU167382
GTGAAAGTGATACTGCTTTTATATAGCAGCTCTAAATGAAGCTGTTAACATCAGTAATTTAATATCCAGGTATAAGACAAAAAGTGTTCTTCTCTgcaaaccaaaatatttttaaatgaagccaAAGTAATCTGGTCAGTATAGCATAGCCCAGGGCTTCTTAAATCTTTTCTCCCGTCTTAAAGGACAGAGAGGCGATGCCTTGCAAAATTTAGCTCGAAC
>XR_006252836.1
GAAGGTGCAGGTGGAGACGAAGTAAAGTGTGAAAAGGGATCTGGAGGGAGACAAAGATGTTCACACACAGTGTAACTACTGCGGTGCCCGTCACAAAACGAGAAGTGAATCAGAGAGAATCACTGCAGACACTCCGATTGGACTGATAAAGACAAGAGCAATAATCCAGACACTGAAGTCAATCTGGAATCCAGCTGGATAATTGCAGAATGCCACACAAGATGACGGATTGACGACCAGATGAGCCTATGGATGCTCTCACATCAACGAACACGAAAAAGCAGAGCGATCACAACATAAATAGACAGATTGCAGGATGGATGAATTGATAGATCTTTTAGAGAAGGTCAAACTTCTGTGCGCACACTCTCAAACCATCGTGAAAAGAAGAGAAATTGATTGCCGCTCACAAAAGGGTTGAAATGACcaagaaattatttttctgGGCAATGAACattgtgagtgagtgtgagagagagggagagaaaggggGGAAAATGCCCAGCCTTTTTGTATGAATTGTCTCAGAAGTAACTATAGTCATCTTCGAGATGTTGCCAGTGTTCTGGTCAAATGGCCACTCTACCAGACCAGACCGGAGCGGTTTCGAGTTTCAGCACCTCATCTGAAGTTTGGCCTCGAACGTAGCCTTCGCATTTTCGCCAAAGGAGATGGTCATGATGTCATCATTTCACCTGTCAAGAATCTGTCAAGGTTGCCTTGGAGACCATTGGCACCCCTGGATCCCTTGTGCCCCGTGGCACAAGCTTTCGATTGTGGATATCACGGTTCCTCGATTGATGGACGCCTCCAATCCACACTGTATTACCCTGCTGGGGTGACAAAGAAGACATCTAACGCTCCCATCCCTTTCCACAGTGCAAATAAAGACATCTGGGGGGATGAATGCTTCTTTAATCATATGACGTCTGTGTGCACCAAGCCGTTCAAACGGCGCGCCACTAATGGACTGCTGATGAATAGACAAAGGGAACAACCATCCACAGTGAGCAGAACAAATAGGCCTCCAGCACAAATGGAGATGTAAGTGAACCCACTCACTCACGTTTGGATATGTAGATTGGGGTTCAGATGATCACACCCGCAGACAGAGATGAATATACGGGCTCGTGAGCAAATAAACACGTCGAGCCTTTTTGTGAGCTCACAGAGAGGCCATTACCACGAATCCGCATgctaatcataattaatcactTACTTATTAAACGTTAATTGCGCTGCGCAAATGTATCCTCGCCCAGAAATGGCCCGGTATTGAAGCTGCTGGGCCTAGACAGGGCGATATTAatttattcttacttattaatttccctaattaaaacaacaagacCTAGATATATAAGTGTATTCTTTGCGTAATAAATGAGGGGTTTTGAAAAGCAATAGTGAGTCAAGCGCGTCGCTGTACAAACCGTAAATCATCTTCTCGGAGTTGATTCATACTCTTCATCATCTCTGAGCCAAACGAACGTATTAAGAAGATGGCACCCGAGTCTGTATAATTACGCACAtcctttacaaaaaaatacataaattcatTTAGATGAACGGTTTTACTCCTAATAGAACTTGCTGATCTTTTTCCACTAAAGCTTAATCATCTATCTAATAGGATCAGGATGTGTTGCCGCTTTGCAAGCCTCTCCGAAACTTAACAATGCCTCTTTAGGAAGAGTTTGCCACTCACGGCAGAAATTGTTTCATTTAGACTCAAACTGTTGGCATGTTGCAGATATTTTAGTCTAGTTCTCGATTGTGGGTTAACTTAATGAGTGCCCCTTGTCCCCCCACCCCACCCCTGCCTCGGTTTTCTCCATGCATTTTTATTGGTTtcctcatttctttttctccacttcCAAAATGGTCCACCTGAGCGGGCTAAGCGAGGGCGGGGTGCCGTAATAGCGCTAATGCCCAGTAATACGGGCCAGATATTATAATCTAAGCGCTGTCACAACGCGTTAGCCGTCGCAGACTGACGTGTCAATGCTAGTGAACGCAGGTGATATGGCGGGGCAGGAAGCGCGGCCCGGTAATCGTCTAACACAGACACGTTTATTTTgagtctcgctctctctccctctctcttcctccctcgCGCTCGCACGCCGTCTTTCGCGAGGTTTTGAGCGCGTGAAGGCTAACGACCCGTGCGCGCTCCTGCGGTCACGGTGCGGTGCGCGCTTCGTTGGTGATTTATGCGCGTGTGTAATTGAGTGTTAATAAAAGGTTGTCCGTAGCGCGTGTAATTGTGTGTTCAAGACTTTCTGTGTGCGAGCGTGGATGTAATTGGGTGTTATCGATGTTGCGCGCGCGTTTGTATGAGGCTGGGCGCGCGCTTAtacgtgttttttttcctactggTTCTGTTCCAGTCTCTTATTCGTGTTCCGTATGCTGTATCGCCCTTTAACAGACCAGAGGCCACATACACTAGAGGGCATTCTATACGTGGTATCAACACTTGTATGGCTCAGTCGAAGCTTTTTTCCAGCTCATTATTTCTGACAGCAGCaatttagattatttatttttactatgcTTTATCACACGAGCAAGACTGAATCTCAGCACAGATGTGTGAACTGGCTTTAGTGCTCTGCACTTTGTTGATATTCAAGAGGCCTTCTGTAGCATTGTGGTGAAAGTGATACTGCTTTTATATAGCAGCTCTAAATGAAGCTGTTAACATCAGTAATTTAATATCCAGGTATAAGACAAAAAGTGTTCTTCTCTgcaaaccaaaatatttttaaatgaagccaAAGTAATCTGGTCAGTATAGCATAGCCCAGGGCTTCTTAAATCTTTTCTCCCGTCTTAAAGGACAGAGAGGCGATGCCTTGCAAAATTTAGCTCGAACCCACGTACCTGTCATTTTCTAGggatcctgaagaccttgatgaACTTGCTCAGGtgttttgattaggtttggaggACACTGGCACTCCATGGCAAGATTCGAGGAACCCTGATGTAGCCCGTGAGTGGAGCGACGAGTCACCTTCAGTCACCGGTCACCTTCTTTCACAATCAGCCTGCTCTAGTTCCACTCCTGCActgtatatgaaaaaaaaaatcaaaagttgAGAAGACTTAATCGATATAGGCAACCAGCTTTAGGAGTTTTCTCaatttgttgttttcagtttcTACAACAAAACCCCCCCCAAATCCCTTACCAAAACAAGTGAAGAAGTGAGTTTTTAAGGGGTTAATAAATCCCAGAgaggataaaaaaaagctttgttctaTGAATGTGGGGTATTTGCGTCATTCAGAGGTATAAGTATAATACAGTATGCCATAttgtgctaaaaaataaaatgtttaactgGCTAAAGAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU167382 False 222 lncRNA 0.36 1 16488601 16488822
XR_006252836.1 True 3367 lncRNA 0.44 3 16488118 16494739

Neighbor

gene id symbol gene type direction distance location
erfl1 erfl1,LOC107723390,LOC107596612,LOC107706551,LOC107657604,LOC107699460,LOC108431014 coding downstream 9075 16439901 ~ 16479043 (-)
arhgef1b arhgef1,LOC107706396,LOC107657708,LOC107723498,LOC107595767 coding downstream 48663 16407152 ~ 16439455 (-)
cd79a NA coding downstream 82465 16402969 ~ 16405653 (-)
lipeb LOC107706458,LOC107699484,LOC107595727,LOC107723485,LOC107657706,LOC107593665 coding downstream 85243 16381325 ~ 16402875 (-)
tmem145 tmem145,LOC107706472,LOC107723540,LOC107657707,LOC107595744,LOC107593664 coding downstream 110108 16360916 ~ 16378010 (-)
LOC122359884 LOC107706374,LOC107687795,LOC107595808,LOC107723391 coding upstream 13744 16508483 ~ 16513971 (-)
megf8 megf8,LOC107595817,LOC107687796,LOC107593670,LOC107657710 coding upstream 19618 16514357 ~ 16539613 (-)
LOC122360041 LOC107687802,LOC107595942,LOC107706353 coding upstream 62807 16557546 ~ 16560034 (-)
l3mbtl1b LOC107687798,LOC107706333,LOC107723564,LOC107657713,LOC107593673 coding upstream 66960 16561699 ~ 16570438 (-)
sgk2b sgk2b,LOC107687822,LOC107595908,LOC107706345 coding upstream 76627 16571366 ~ 16575436 (-)
G113325 prss59.1,LOC107595716,LOC107739933,LOC107657703,LOC107735769,LOC107699485,LOC107593705,LOC101066992,LOC108431067,LOC102234122 non-coding downstream 130495 16352270 ~ 16357623 (-)
G113281 NA non-coding downstream 291441 16120326 ~ 16196677 (-)
G113280 jarid2a,LOC107593646,LOC107657689,LOC107714830,LOC107699452,LOC107595576 non-coding downstream 292222 16194029 ~ 16195896 (-)
G113300 NA non-coding downstream 295429 16190862 ~ 16192689 (-)
LOC122361072 LOC107723533,LOC107657692 non-coding downstream 420573 16066166 ~ 16067545 (-)
G113405 NA non-coding upstream 57869 16552608 ~ 16553858 (-)
G113433 NA non-coding upstream 93946 16588685 ~ 16589614 (-)
G113439 epb41l4b,LOC107706320,LOC107687806,LOC107596310 non-coding upstream 111975 16606714 ~ 16607680 (-)
G113470 cdh17,LOC107595837,LOC107706528,LOC107687825 non-coding upstream 184945 16679684 ~ 16680112 (-)
G113473 NA non-coding upstream 199191 16693930 ~ 16694290 (-)
fam8a1b fam8a1,fam8a1b,LOC107715098,LOC107593650,LOC107595671,LOC107723574,LOC107657622 other downstream 248612 16232972 ~ 16239506 (-)
atxn1b atxn1b,LOC107699498,LOC107595586,LOC107723489,LOC107593649,LOC107657690,LOC107736225 other downstream 259652 16218661 ~ 16228466 (-)
G113267 LOC107699468,LOC107715083,LOC107596252 other downstream 346883 16139319 ~ 16141235 (-)
G113275 zgc:136493,LOC107699466,LOC107714862,LOC107596560 other downstream 474367 16012964 ~ 16013751 (-)
adnp2a LOC107714821,LOC107699502,LOC107723537,LOC107595567,LOC107657688 other downstream 481647 16001313 ~ 16006471 (-)
esrp1 esrp1,LOC107687807,LOC107706288,LOC107593677,LOC107657715,LOC107723447,LOC107706528,LOC107595837,LOC107687825,LOC107657630,LOC107723411,LOC107593711 other upstream 91345 16586084 ~ 16682178 (-)
onecutl onecutl,LOC107741751,LOC107663311,LOC107689849,LOC107732477 other upstream 1317631 17812370 ~ 17830977 (-)
lmna lmna,LOC107704890,LOC107598000,LOC107671682,LOC107587813,LOC107741735,LOC107723101 other upstream 1700732 18195471 ~ 18239269 (-)
slc45a4b slc45a4,LOC107704898,LOC107587808,LOC107741725,LOC107671711,LOC107552861,LOC107723109 other upstream 1862678 18357417 ~ 18367273 (-)
mroh1 mroh1,LOC107741723,LOC107724794,LOC107671755,LOC107704831 other upstream 1997887 18492626 ~ 18520287 (-)

Expression


Co-expression Network