G113617



Basic Information


Item Value
gene id G113617
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information


Item Value
chromosome id NC_056714.1
NCBI id CM032083.1
chromosome length 28146790
location 17067523 ~ 17078008 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence


>TU167764
CATCGCGGTGATatctttaacaaacaaaaactgagtATTGTTACCGGTGATTCGCCTCCGGTGCTTTTACAGAGCGGACCCCGGAAAACTCCTTTGATGCTCCGGTAGTGTCCATTGCTGAGGTGCGTGGAGCTGATCACGAGATAGTAGCACGCCATCCGGTCCAGCGTCACCCATGAGCGGGCTCCAGGGACGGCCAGGCGATCAAGTTAGTTTGGAGGTGATCTCGCAGGGGATGCGCCGAGTGGAGGAGCCAGAGGACGTCTCTGCGCGCTGGTCCGGTCGCTTCTGTCAGTGCTGGACGGCGTTAAAAGGACACGCCGATAAAATACGAATCTGCCGTGATTGCTAATCGGCAACACCGTCCCATACTTGTGTCACATCCTCTGTCTGTTTTCCTCTTTGAGAAGAGAGAAGCAGCTGCTCTCCAGCCCAGACGTCGTTATTGGATGTTGCTTTGGAGTTGCCAGGACTCTTCAGTCCCACAGACTCGAGCGTTTAGCCTTATTGTTTGTATCCAATACAAGAAACACTTCAACTGGGGTCACGTCTTCCTCAAACAGCGTCCAAAAAGTCACGTCTGTGGAGTGATTTGAAAATACACATTCCAGTGCCAGTTCGGTATTGTGGTACTTTTTTAATCTGAGTGAGGTTTTAGCTCGCTTGATTTCAAACGAGTGCGCGCGTATCTTCAATTGACCGGTCAACTCTCTGACGAATTTGCTGCATGTCCGATCGCAGATGCTCTTTTCCTGCGCCGAAACCATCCGCGATCTGAGCAGAGTCCAAATGAGTGTAAAGCAGaggtttcctctctctctctctctctctctctctctctctcttttctctctctctct

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU167764 True 860 lncRNA 0.51 2 17067523 17078008
Loading

Neighbor


gene id symbol gene type direction distance location
steap4 steap4,LOC107705999,LOC107689887,LOC107723567,LOC107671369 coding downstream 8424 17053350 ~ 17059099 (-)
tbrg4 LOC107706009,LOC107689888,LOC107723538,LOC107593700,LOC107671367,LOC107596077 coding downstream 32451 17027094 ~ 17035072 (-)
nacad LOC107706031,LOC107689890,LOC107593698,LOC107723474,LOC107657733,LOC107596337 coding downstream 44945 17010376 ~ 17022578 (-)
trnat-ugu_49 NA coding downstream 77149 16990302 ~ 16990374 (-)
rbm12ba LOC107706078,LOC107596631,LOC107689919,LOC107657732,LOC107723523,LOC107593697 coding downstream 86113 16978772 ~ 16981410 (-)
LOC122360848 LOC107549209,LOC107689901,LOC107738870,LOC107681562 coding upstream 95900 17173908 ~ 17185184 (-)
si:dkey-12j5.1 si:dkey-12j5.1,LOC107549224,LOC107689883,LOC107717803,LOC107738871,LOC107681587,LOC107593733 coding upstream 112475 17190483 ~ 17269769 (-)
rpp38 NA coding upstream 319376 17397384 ~ 17399512 (-)
abcb4 abcb4,abcb1,LOC107738866,LOC107549227,LOC107689873 coding upstream 332918 17410926 ~ 17426164 (-)
adam15 adam15,LOC107681573,LOC107717790 coding upstream 349921 17427929 ~ 17447014 (-)
G113605 NA non-coding downstream 75144 16991791 ~ 16992379 (-)
G113604 NA non-coding downstream 77545 16989710 ~ 16989978 (-)
G113588 NA non-coding downstream 153561 16913660 ~ 16913962 (-)
G113587 NA non-coding downstream 155641 16910335 ~ 16911882 (-)
G113567 nr4a3,LOC107687818,LOC107706170,LOC107723503 non-coding downstream 171600 16894352 ~ 16895923 (-)
G113637 NA non-coding upstream 108937 17186945 ~ 17187257 (-)
G113672 NA non-coding upstream 223321 17301329 ~ 17301558 (-)
G113832 NA non-coding upstream 556785 17634793 ~ 17670174 (-)
G113892 NA non-coding upstream 706874 17784882 ~ 17823053 (-)
G113893 LOC107663331,LOC107689850,LOC107741752,LOC107587832,LOC107597985,LOC107663319,LOC107597987 non-coding upstream 711759 17789767 ~ 17818100 (-)
esrp1 esrp1,LOC107687807,LOC107706288,LOC107593677,LOC107657715,LOC107723447,LOC107706528,LOC107595837,LOC107687825,LOC107657630,LOC107723411,LOC107593711 other downstream 385345 16586084 ~ 16682178 (-)
fam8a1b fam8a1,fam8a1b,LOC107715098,LOC107593650,LOC107595671,LOC107723574,LOC107657622 other downstream 828017 16232972 ~ 16239506 (-)
atxn1b atxn1b,LOC107699498,LOC107595586,LOC107723489,LOC107593649,LOC107657690,LOC107736225 other downstream 839057 16218661 ~ 16228466 (-)
G113267 LOC107699468,LOC107715083,LOC107596252 other downstream 926288 16139319 ~ 16141235 (-)
G113275 zgc:136493,LOC107699466,LOC107714862,LOC107596560 other downstream 1053772 16012964 ~ 16013751 (-)
onecutl onecutl,LOC107741751,LOC107663311,LOC107689849,LOC107732477 other upstream 734362 17812370 ~ 17830977 (-)
lmna lmna,LOC107704890,LOC107598000,LOC107671682,LOC107587813,LOC107741735,LOC107723101 other upstream 1117463 18195471 ~ 18239269 (-)
slc45a4b slc45a4,LOC107704898,LOC107587808,LOC107741725,LOC107671711,LOC107552861,LOC107723109 other upstream 1279409 18357417 ~ 18367273 (-)
mroh1 mroh1,LOC107741723,LOC107724794,LOC107671755,LOC107704831 other upstream 1414618 18492626 ~ 18520287 (-)
G114236 LOC101883708,LOC105900568,LOC106574835 other upstream 1571511 18649519 ~ 18650609 (-)

Expression


G113617 Expression in all Baseline Samples

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The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying values. Range: 0 to 0.8.
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G113617 Expression in each Bioproject

Bar chart with 2 bars.
G113617 Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 5.
End of interactive chart.

Co-expression Network