G114430


Basic Information

Item Value
gene id G114430
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056714.1
NCBI id CM032083.1
chromosome length 28146790
location 19206119 ~ 19262830 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU168924
CTTTACCTTTTGGCTCTTGAATAAACTCTCGAACGCGAAACAAAGAGGCGAAGAAGTAAATCAGTGGTTTCCTCGAGATATTCGCGCTGACATTTCACTTTCCCCGGAGTCCTTCGCTCTTTTATTGTGCGTTAAATGAAGCTATTCTCCGGCGCGCGGGACGGCTCTTCTCCTCgcttcgctctctctctctctctctctctctctctctctctctctctctctctgt

Function

NR:

description
PREDICTED: sarcalumenin-like isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU168924 True 229 lncRNA 0.49 2 19206119 19262830

Neighbor

gene id symbol gene type direction distance location
syngap1b syngap1b,syngap1,LOC107592452,LOC107726670,LOC107688248,LOC108433893,LOC106605281,LOC106581894,LOC101464846,LOC102301914,LOC102194363 coding downstream 10690 19095755 ~ 19195429 (-)
smg5 smg5,LOC107728478,LOC107688247,LOC107726659,LOC107671430 coding downstream 111381 19078953 ~ 19094738 (-)
paqr6 paqr6,LOC107728479,LOC107688246,LOC107726661,LOC107671432,LOC107592147 coding downstream 131309 19056157 ~ 19074810 (-)
rbm8a rbm8a,LOC107671476,LOC107592456,LOC107592145 coding downstream 225493 18977536 ~ 18980626 (-)
otud7b otud7b,LOC107726676 coding downstream 229426 18954329 ~ 18976693 (-)
upk1a upk1a,LOC107728482,LOC107666813,LOC107592444,LOC107686548,LOC107709649 coding upstream 212988 19475818 ~ 19479474 (-)
zgc:101716 zgc:101716,LOC107686482,LOC107556972,LOC107728463,LOC107709702,LOC107666748,LOC107592507 coding upstream 224927 19487757 ~ 19490733 (-)
si:dkey-122a22.2 si:dkey-122a22.2,LOC107719144,LOC107666836,LOC107592440,LOC107686774,LOC107556959 coding upstream 602896 19865726 ~ 19886663 (-)
sqlea sqlea,sqle,LOC107666801,LOC107556968,LOC107714342,LOC107686341,LOC107592438 coding upstream 748465 20011295 ~ 20020232 (-)
rnf144b rnf144b,LOC107592436,LOC107686312,LOC107556966,LOC107714339 coding upstream 759414 20022244 ~ 20027005 (-)
G114399 NA non-coding downstream 142948 18992862 ~ 19063171 (-)
G114401 ntrk1,LOC107728446,LOC107592455,LOC107688245,LOC107671431,LOC107592146 non-coding downstream 164353 19012655 ~ 19041766 (-)
LOC122360016 apoa2,LOC107688286,LOC107728486 non-coding downstream 218193 18985403 ~ 18987926 (-)
G114259 LOC107666800,LOC107719142,LOC107592439 non-coding downstream 465290 18739754 ~ 18740829 (-)
LOC122360941 LOC107600493,LOC107719147,LOC107592185,LOC107685964,LOC107666785 non-coding downstream 517724 18687166 ~ 18688395 (-)
G114458 NA non-coding upstream 17598 19280428 ~ 19283527 (-)
G114462 NA non-coding upstream 30163 19292993 ~ 19294087 (-)
G114433 LOC107666765,LOC107728460 non-coding upstream 42676 19305506 ~ 19307497 (-)
G114468 NA non-coding upstream 45088 19307918 ~ 19308512 (-)
G114438 LOC107728464,LOC107666853,LOC107728451 non-coding upstream 73047 19335877 ~ 19343773 (-)
rpz rpz,LOC107688232,LOC107728474,LOC107592467,LOC107671470,LOC107592140,LOC107726666,LOC107688233 other downstream 385009 18812238 ~ 18821110 (-)
LOC122360940 fli1,LOC107692484,LOC107709558,LOC107656981 other downstream 507712 18684573 ~ 18698407 (-)
LOC122360747 plekha8,LOC107684546,LOC107745377,LOC107743161,LOC107596648,LOC107550836 other downstream 534845 18669607 ~ 18671274 (-)
G114236 LOC101883708,LOC105900568,LOC106574835 other downstream 555510 18649519 ~ 18650609 (-)
mroh1 mroh1,LOC107741723,LOC107724794,LOC107671755,LOC107704831 other downstream 685832 18492626 ~ 18520287 (-)
cd22 LOC107728466,LOC107592448,LOC107666891,LOC107709614,LOC107686701 other upstream 154132 19416962 ~ 19421094 (-)
dpys dpys,LOC107728457,LOC107686378,LOC107666745 other upstream 333602 19596432 ~ 19657724 (-)
G114715 NA other upstream 903965 20166795 ~ 20177758 (-)
G114793 NA other upstream 1179135 20441965 ~ 20452450 (-)
scn1ba scn1b,scn1ba,LOC107666845,LOC107737825,LOC107719111,LOC107686587 other upstream 1373295 20636125 ~ 20650937 (-)

Expression


Co-expression Network