G114793


Basic Information

Item Value
gene id G114793
gene name NA
gene type unknown
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056714.1
NCBI id CM032083.1
chromosome length 28146790
location 20441965 ~ 20452450 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU169487
TTTAGtgttaaaaaggtttatttcaacaactgtcagatttttttctcttcgtAGTTTATATTcccaaaaaagtacaaaataaaacaagtacatCAAAGGATTAGAAATCACATCAAAACAAAGAcacattgtgttttttctttatatcaATCCAAGCATTTTTtccatatatttatacatactcACTGAATTAGTCAGACAAACATCAAAACCTCTCAgtagctttttcttttatgacaacattttatattttaaaccccgaatatgttttacttttttcttcttttttttttttacaatatacacCAACGCATGCCGTAATTCAGTTAGGCAGGGgtaggtgtgtgtatatatatatatataagggcTGGGTCAGGGGTGGGTCGACTACAGGACTGCAACAAGGGGCGGGGCAGGAGGCGGAGACTGAGTGGGTAGGGGCGGGGTTTTTAAAGTTTTCTGTCATGTGGTGATGGTGTGGTGGGTGTGGCTGCTCGTAGCGTCTGCTGCTCGATGCTTTAAGTGATCGTGGACGTGGTGGCGTGGGGTGCTTGTTTCTGTTCTACATCATGTTGTTCTGCAGCGAGTTTACCTCCGAAGAGTTCTCCTCGCCCAGCACCTTATGGTTCTCGTGCTTAGGGGTGAGCGAGTTCTGGATGTTCAGCGACTCGTCCTCTTTGGGTGGGGGCGCCTTCACGGGGTCCTCCAGCTTGTTCTGGGTATTAGGATCACCTGCGCTTGCGCAACTTGTTATTCTCGGTCTTGAGCACGTGCAGCTTCTTGGCAAAGCAAACGACGATCATGAAGAGCAGGAGCACCATGAGAGCGGAGGCCCCGATGGCGATGCACATTACCTGGAACTCGGTGATGACCGACTCGCAGCGGGCACCCTTGTGCCACATGTAGTCCTGGATGTTGCACCTGCAAGA
>TU169489
TTTAGtgttaaaaaggtttatttcaacaactgtcagatttttttctcttcgtAGTTTATATTcccaaaaaagtacaaaataaaacaagtacatCAAAGGATTAGAAATCACATCAAAACAAAGAcacattgtgttttttctttatatcaATCCAAGCATTTTTtccatatatttatacatactcACTGAATTAGTCAGACAAACATCAAAACCTCTCAgtagctttttcttttatgacaacattttatattttaaaccccgaatatgttttacttttttcttcttttttttttttacaatatacacCAACGCATGCCGTAATTCAGTTAGGCAGGGgtaggtgtgtgtatatatatatatataagggcTGGGTCAGGGGTGGGTCGACTACAGGACTGCAACAAGGGGCGGGGCAGGAGGCGGAGACTGAGTGGGTAGGGGCGGGGTTTTTAAAGTTTTCTGTCATGTGGTGATGGTGTGGTGGGTGTGGCTGCTCGTAGCGTCTGCTGCTCGATGCTTTAAGTGATCGTGGACGTGGTGGCGTGGGGTGCTTGTTTCTGTTCTACATCATGTTGTTCTGCAGCGAGTTTACCTCCGAAGAGTTCTCCTCGCCCAGCACCTTATGGTTCTCGTGCTTAGGGGTGAGCGAGTTCTGGATGTTCAGCGACTCGTCCTCTTTGGGTGGGGGCGCCTTCACGGGGTCCTCCAGCTTGTTCTGGGTATTAGGATCATCCTCTGCGCTTGCGCAACTTGTTATTCTCGGTCTTGAGCACGTGCAGCTTCTTGGCAAAGCAAACGACGATCATGAAGAGCAGGAGCACCATGAGAGCGGAGGCCCCGATGGCGATGCACATTACCTGGAACTCGGTGATGACCGACTCGCAGCGGGCACCCTTGTGCCACATGTAGTCCTGGATGTTGCACCTGCAAGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU169487 False 929 TUCP 0.45 2 20441965 20452450
TU169489 True 932 TUCP 0.45 2 20441965 20452450

Neighbor

gene id symbol gene type direction distance location
si:ch211-215k15.4 LOC107666815,LOC107600540,LOC107719123 coding downstream 50099 20389474 ~ 20391866 (-)
pkdc si:ch211-215k15.5,LOC107737834,LOC107592943,LOC107686716 coding downstream 54349 20386077 ~ 20387616 (-)
herpud2 herpud2,LOC107686057,LOC107600485,LOC107719122,LOC107592253,LOC107737813 coding downstream 56509 20379180 ~ 20385456 (-)
dpy19l1l dpy19l1l,LOC107666881,LOC107719125,LOC107592414,LOC107737812,LOC107686065,LOC107592262 coding downstream 128726 20305818 ~ 20313239 (-)
si:ch211-135n15.2 LOC107719151,LOC107592495,LOC107666737,LOC107714311,LOC107686628,LOC107592633 coding downstream 177075 20260835 ~ 20264890 (-)
fli1rs fli1b,LOC107600493,LOC107719147,LOC107666785,LOC107685964,LOC107592185 coding upstream 127832 20580282 ~ 20592827 (-)
si:ch211-225p5.8 LOC107686707,LOC107592124,LOC107666781,LOC107719166,LOC107737837,LOC107600541 coding upstream 151639 20604089 ~ 20607902 (-)
mtdhb LOC107666798,LOC107717360,LOC107600499,LOC107668302,LOC107592090 coding upstream 228975 20681425 ~ 20686877 (-)
ubxn11 LOC107600501,LOC107592913,LOC107713843,LOC107668295 coding upstream 247547 20699997 ~ 20706330 (-)
aste1a LOC107666773,LOC107717364,LOC107600542 coding upstream 284499 20736949 ~ 20741672 (-)
G114771 NA non-coding downstream 32355 20342077 ~ 20409610 (-)
G114768 NA non-coding downstream 136521 20302983 ~ 20305444 (-)
G114747 NA non-coding downstream 196726 20245021 ~ 20245239 (-)
G114718 NA non-coding downstream 197812 20174163 ~ 20244153 (-)
G114741 NA non-coding downstream 224384 20216103 ~ 20217581 (-)
G114798 NA non-coding upstream 23067 20475517 ~ 20475747 (-)
G114801 NA non-coding upstream 31351 20483801 ~ 20484071 (-)
G114803 NA non-coding upstream 32946 20485396 ~ 20485725 (-)
G114804 NA non-coding upstream 33445 20485895 ~ 20486127 (-)
G114853 NA non-coding upstream 48070 20500520 ~ 20520126 (-)
G114715 NA other downstream 264207 20166795 ~ 20177758 (-)
dpys dpys,LOC107728457,LOC107686378,LOC107666745 other downstream 784241 19596432 ~ 19657724 (-)
cd22 LOC107728466,LOC107592448,LOC107666891,LOC107709614,LOC107686701 other downstream 1020871 19416962 ~ 19421094 (-)
rpz rpz,LOC107688232,LOC107728474,LOC107592467,LOC107671470,LOC107592140,LOC107726666,LOC107688233 other downstream 1620855 18812238 ~ 18821110 (-)
LOC122360940 fli1,LOC107692484,LOC107709558,LOC107656981 other downstream 1743558 18684573 ~ 18698407 (-)
scn1ba scn1b,scn1ba,LOC107666845,LOC107737825,LOC107719111,LOC107686587 other upstream 183675 20636125 ~ 20650937 (-)
G114901 NA other upstream 199527 20651977 ~ 20653574 (-)
G115003 cpne4a,LOC107592564,LOC107600547,LOC107666882,LOC107713817 other upstream 560157 21012607 ~ 21017105 (-)
G115093 plekhf2,LOC107666819,LOC107600513,LOC107668314,LOC107591926 other upstream 923440 21375890 ~ 21378836 (-)
mettl6 mettl6,LOC107600537 other upstream 957509 21409959 ~ 21411772 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
rainbow trout (Oncorhynchus mykiss) G94365 LOC106577185 non-coding NC_048565.1 CM023219.2 83778531 ~ 83780961 (-)
eurasian perch (Perca fluviatilis) G77793 cspg5,LOC103364230,LOC102791138 non-coding NC_053118.1 CM020915.1 32227268 ~ 32294617 (-)
striped catfish (Pangasianodon hypophthalmus) G87616 speg,LOC108266540,LOC108423902,LOC107657495,LOC107602155,LOC107728905,LOC107714387 non-coding NC_047599.1 CM018545.1 23593257 ~ 23595663 (+)
mexican tetra (Astyanax mexicanus) G77148 NA non-coding NC_035905.1 CM008308.1 614011 ~ 621295 (+)
mexican tetra (Astyanax mexicanus) G232626 cspg5a,LOC108437394 non-coding NW_019170804.1 APWO02000402.1 233198 ~ 238908 (+)