G114908


Basic Information

Item Value
gene id G114908
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056714.1
NCBI id CM032083.1
chromosome length 28146790
location 20677054 ~ 20680221 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU169682
aaaaacacacagacatgtagtacattaacatttcttttattaaatcatcATAAGGCCGCTGAGTAGTGTGCAGACTTCTCAAAGAAAAACATGCCCTGTGTTCAGAGCATTGCCCACTGAAGAACTCCAGATACGCCCGATAAGGCACATTTAGAAACATCGGATCCATTACCCCACCTGAGTAATGTGCAGTCTGTCACGTCAAACTATAATCATTCACAGCTGAACAACAGAGTTTTCTAAGTACCTTCTATTATGGTGATGCGAATAGTTATCAAATATAAATTCTCAAAGTGAAGAATGAAACATCTCGAGTCACACCTTACATCCCCAAAACAacaaatcagaaatgtttacaGAGGTTAAACTCACATAAAATACAATGTGTCGAGTAATTCATGAAGTGAGAGGCAGCACGTTGATTATAAAAGCCAACGTTATTACTAAGACAATCAAAGGCAATTACGacaattcagaaataaaaaaaattaactgaaaaaatagGAGGACATCTGTATATGTAAAGTGGTTATTACTACCAAAGTGGCCAGTTCTGACTGAGATACTCGAAATGGAAGATATGTATAATATCCATCCACCCGCCAGTATAGCAATACAGTACATAATCGAAAGTACTAATTTACCGAACAGGAAATGCACCAGACTCACAGAGTAGTGCAGCAAACAATTTTGCTTACGTAGCACATCGGCCTGCTTCGCTATTTCCGTCACGTGGCAGAAAACTAATTTTACCCCTCCCTAAGACTCGGCCTCACCCAGTGAGACACGTCAAGCCACGGGCGCCCGAAGCTATGCTTCAGTCATCATGAAAGAAATGTAAGGAGAGAGTGCAGCTTGATTCTAAGGCAACGGAGGCTTTTAAATGGTGCCCATGGGCACAGAGGATAGATGAAgagtctgtctgtcaggaagcaCACACTTCCAGCAGATTGGTCCGTCACGGAGTCTGCAAAGCGATCAGTGCGTGGACCGGTTGATGAAGTTTCTGCAGCATCCTGACCGATAAAGTGAACCAGTGAGCGCAGGatcagaataaaatgtaaaactttggagaaaaaggaggaggaggaaagacaGAGATTCACGGGACCACTAGATGGCACCACTGTTACAGAGGAAACAGAAGGTGTGCGGTGCAGTAAAGGCATGACGTCCCTAGAATTCACTGGCCATGTGCATGAGGGTGAAGTGGTCTGCAGGCAGTGCGGCGTTGACGTTAAGACTTGCGCCTCCGGGACCCGCAAGAACGCTGGGAGTCAACTATGAAGCAGGCTTTTTTTTGGTCGTGTGCAGGCCTGCTTCGGTGCCAATGTTGACCGTGATGTTGGTGTAAAGCGGCTGGTAATCCCGGGACGTGATCTCGTACTCCACGGTATTCATGCCGTCTTCTTTCCATGTGTGCCGGGTCTTGGCCAACATGTTAAAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU169682 True 1447 lncRNA 0.45 2 20677054 20680221

Neighbor

gene id symbol gene type direction distance location
si:ch211-225p5.8 LOC107686707,LOC107592124,LOC107666781,LOC107719166,LOC107737837,LOC107600541 coding downstream 69152 20604089 ~ 20607902 (-)
fli1rs fli1b,LOC107600493,LOC107719147,LOC107666785,LOC107685964,LOC107592185 coding downstream 84227 20580282 ~ 20592827 (-)
si:ch211-215k15.4 LOC107666815,LOC107600540,LOC107719123 coding downstream 285188 20389474 ~ 20391866 (-)
pkdc si:ch211-215k15.5,LOC107737834,LOC107592943,LOC107686716 coding downstream 289438 20386077 ~ 20387616 (-)
herpud2 herpud2,LOC107686057,LOC107600485,LOC107719122,LOC107592253,LOC107737813 coding downstream 291598 20379180 ~ 20385456 (-)
mtdhb LOC107666798,LOC107717360,LOC107600499,LOC107668302,LOC107592090 coding upstream 1204 20681425 ~ 20686877 (-)
ubxn11 LOC107600501,LOC107592913,LOC107713843,LOC107668295 coding upstream 19776 20699997 ~ 20706330 (-)
aste1a LOC107666773,LOC107717364,LOC107600542 coding upstream 56728 20736949 ~ 20741672 (-)
si:dkey-11p23.7 si:dkey-11p23.7,LOC107717350,LOC107666731,LOC107600543 coding upstream 84417 20764638 ~ 20767365 (-)
LOC122360416 nek11 coding upstream 146007 20826228 ~ 20866224 (-)
G114888 NA non-coding downstream 99780 20576686 ~ 20577274 (-)
G114853 NA non-coding downstream 156928 20500520 ~ 20520126 (-)
G114804 NA non-coding downstream 190927 20485895 ~ 20486127 (-)
G114803 NA non-coding downstream 191329 20485396 ~ 20485725 (-)
G114801 NA non-coding downstream 192983 20483801 ~ 20484071 (-)
G114924 NA non-coding upstream 43950 20724171 ~ 20725671 (-)
G114943 NA non-coding upstream 88523 20768744 ~ 20769087 (-)
G114947 NA non-coding upstream 101582 20781803 ~ 20835235 (-)
G114997 NA non-coding upstream 437928 21118149 ~ 21120584 (-)
G115042 si:dkey-22o22.2,LOC107668308,LOC107713796,LOC107592533,LOC107666790,LOC107717379,LOC107600533 non-coding upstream 603243 21283464 ~ 21314746 (-)
G114901 NA other downstream 23480 20651977 ~ 20653574 (-)
scn1ba scn1b,scn1ba,LOC107666845,LOC107737825,LOC107719111,LOC107686587 other downstream 26117 20636125 ~ 20650937 (-)
G114793 NA other downstream 224604 20441965 ~ 20452450 (-)
G114715 NA other downstream 499296 20166795 ~ 20177758 (-)
dpys dpys,LOC107728457,LOC107686378,LOC107666745 other downstream 1019330 19596432 ~ 19657724 (-)
G115003 cpne4a,LOC107592564,LOC107600547,LOC107666882,LOC107713817 other upstream 332386 21012607 ~ 21017105 (-)
G115093 plekhf2,LOC107666819,LOC107600513,LOC107668314,LOC107591926 other upstream 695669 21375890 ~ 21378836 (-)
mettl6 mettl6,LOC107600537 other upstream 729738 21409959 ~ 21411772 (-)
trnae-cuc_38 NA other upstream 729739 21409960 ~ 21410031 (-)
G115116 NA other upstream 880000 21560221 ~ 21561216 (-)

Expression


Co-expression Network