G115051



Basic Information


Item Value
gene id G115051
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information


Item Value
chromosome id NC_056714.1
NCBI id CM032083.1
chromosome length 28146790
location 21331012 ~ 21331358 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence


>TU169865
ATAGACTAATGTTGCGGTCTGAAAAAGTGCAAGGGAACTAATTGGATAGGAAGTGAATTTCCAAACAaggaaagaaagtaaaaaaaatgttcccatCCTGAATAAAAAGATCATCTGTCTCATTTTGAGAGAAGACAGGACAAAGGGTAAAAGTGCTATTTTGAGCAGGACTGCAATTTGTATCCTCAGTTATGcagtatatatagtaataaaatatatgccataatttatttgaaatacattcgTACTAAGTATGCTTcaaatctttaaaacatttacattactgaaataaaataatgacaaaacttTATTTGGAATGTTTCTTTATTGCACAATGCGCATTTCTT

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU169865 True 347 lncRNA 0.30 1 21331012 21331358
Loading

Neighbor


gene id symbol gene type direction distance location
tp53inp1 tp53inp1,LOC107666795,LOC107717380,LOC107600511,LOC107591975,LOC107668322 coding downstream 1021 21322911 ~ 21329991 (-)
ccne2 ccne2,LOC107717358,LOC107666792,LOC107600548 coding downstream 9925 21315779 ~ 21321087 (-)
LOC122361118 gbp,LOC107666878,LOC107717378,LOC107600509,LOC107668283,LOC107713814 coding downstream 161608 21167981 ~ 21169404 (-)
dek dek,LOC107600508,LOC107717375,LOC107592846,LOC107666821 coding downstream 184935 21139170 ~ 21146077 (-)
LOC122360614 scap,LOC107600505,LOC107717374,LOC107591983,LOC107668298,LOC107713836,LOC107666822 coding downstream 192531 21120769 ~ 21138481 (-)
nagpa nagpa,LOC107591935,LOC107668288,LOC107666791,LOC107717356,LOC107600512,LOC107713811 coding upstream 2292 21333650 ~ 21346600 (-)
LOC122360424 LOC107666780,LOC107717381,LOC107600549,LOC107713810,LOC107591947,LOC107668291,LOC101885642 coding upstream 29435 21360793 ~ 21365201 (-)
cfap418 LOC107666820,LOC107668311,LOC107592823,LOC107600550,LOC107591919 coding upstream 73905 21405263 ~ 21408968 (-)
trnas-aga_117 NA coding upstream 77586 21408944 ~ 21409025 (-)
rspo3 rspo3,LOC107666888,LOC107713808,LOC107600514,LOC107591889 coding upstream 81510 21412868 ~ 21431807 (-)
G115042 si:dkey-22o22.2,LOC107668308,LOC107713796,LOC107592533,LOC107666790,LOC107717379,LOC107600533 non-coding downstream 16266 21283464 ~ 21314746 (-)
G114997 NA non-coding downstream 210428 21118149 ~ 21120584 (-)
G114947 NA non-coding downstream 495777 20781803 ~ 20835235 (-)
G114943 NA non-coding downstream 561925 20768744 ~ 20769087 (-)
G114924 NA non-coding downstream 605341 20724171 ~ 20725671 (-)
G115098 NA non-coding upstream 57457 21388815 ~ 21389147 (-)
G115155 NA non-coding upstream 493840 21825198 ~ 21825437 (-)
G115170 NA non-coding upstream 542468 21873826 ~ 21874051 (-)
G115262 NA non-coding upstream 898882 22230240 ~ 22237066 (-)
G115335 NA non-coding upstream 1352069 22683427 ~ 22683638 (-)
G115003 cpne4a,LOC107592564,LOC107600547,LOC107666882,LOC107713817 other downstream 313907 21012607 ~ 21017105 (-)
G114901 NA other downstream 677438 20651977 ~ 20653574 (-)
scn1ba scn1b,scn1ba,LOC107666845,LOC107737825,LOC107719111,LOC107686587 other downstream 680075 20636125 ~ 20650937 (-)
G114793 NA other downstream 878562 20441965 ~ 20452450 (-)
G114715 NA other downstream 1153254 20166795 ~ 20177758 (-)
G115093 plekhf2,LOC107666819,LOC107600513,LOC107668314,LOC107591926 other upstream 44532 21375890 ~ 21378836 (-)
mettl6 mettl6,LOC107600537 other upstream 78601 21409959 ~ 21411772 (-)
trnae-cuc_38 NA other upstream 78602 21409960 ~ 21410031 (-)
G115116 NA other upstream 228863 21560221 ~ 21561216 (-)
cenpw cenpw,LOC107600551,LOC107668290,LOC107666774,LOC107567752 other upstream 274600 21605958 ~ 21614203 (-)

Expression


G115051 Expression in all Baseline Samples

Bar chart with 10 bars.
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying values. Range: 0 to 1.5.
End of interactive chart.

G115051 Expression in each Bioproject

Bar chart with 2 bars.
G115051 Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 10.
End of interactive chart.

Co-expression Network