G115093 (plekhf2,LOC107666819,LOC107600513,LOC107668314,LOC107591926)


Basic Information

Item Value
gene id G115093
gene name plekhf2,LOC107666819,LOC107600513,LOC107668314,LOC107591926
gene type unknown
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056714.1
NCBI id CM032083.1
chromosome length 28146790
location 21375890 ~ 21378836 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU169949
caatgcatatatttttctcaaaattagTATCTAATAATGATGATATGATGGATTACATTCAGTTTTCAGCCCTTTCAGAGTTTTACATGAGAACTAAAAAATGTACGAGAAACAGAAAATCCCCAAAATCCATCCAAAAACAAGGGAATCATAAATTACAATGTTCAAgaaattacaaaagaaaacgAATGCCAATCCTGTTTATCCTCTACTCAGATCTATTCTGTTGTGTTTGCAGAGAGAGTAAAGTGCTGGTAGCTGATCCAGAGGTGTTCAGGAAACGCACACATGAACCACACGGAAACgctatgaagaaaaaacaaaaagcagcaaGCCCAactaagaaaatataaaaaaaaaaaaaaacactgtacacAAGTTTACAACATGCAAAACCAAAATCATCTCAGAATATTACAAcacaagtaaaattaaaacaaatgatctCAGGTTAGATTTggaacaattaaaacaattcattaaatcaaatataaagcCAACCATAACTATCCTGGAATCTAACGTTATATTCCAAAAACCTATTTCTAAATCTCAAATAAGTCTcacataaatgtgtaaaaaaaaaaaaaaaaaaaacttttgacttAAGTGTATCTGTCATTGCATATAAACTAGACGGTCTGAGCAGGCTGAGTTAGGTTCATTAGATATCCCTTTTCAACGTCAGTTTTGTTATTCTGACAAACTAAATATGCCGTCTTCACAGGTGATCAAGTATTCGGTACTGAGACACAGTTCTCATGATTCTCCCACCTGCCAACTTGTGTAGAAGTAAAAACCACTGTAAACCTGGAAGATCGCTGATGAAATATACTACTGTATCTCTCTAAAGTGTCCAGAGTCATTTcttaaaacaacacaacactTTGGAAAGCTGTTAGTGCAGTTTTTCTTGTGTTGAACAGCCATAAaagacaaactaaaaaaaaaaaacaaaaggtggCTGTGTCACAGGCGGTAGCTTCCTCATAATGCTTTCGATTCCCGTTCAAAACGTGTAGGATCGACTGTTAAGGGCCAACATGTGACTTCTCGAACACAAAGACCCCAAAGAGAGAGGGGGCAATGTATAGCACATCCTTTGCCTTGGTGTCATGTGATTCCTGTGGGCTGCATGCTAATGTGGCTGTATGTATAGAGCTGAAATCAGGGCTGGAGAGACATGCCAACATAGTTTAGGGCATGTGGGCTACAGATGCAAGATGTCACAAAATACTCGATTCGTGGGAATGTCCAAAAGCTATTCGGACTGGACTGTCCACAACTGAAACTGTCAGTCTAGTTTTAATCATAGCTACAGTCATACGAATAAAAAACGGGGGTACCTGTGCACCTCTGAACAAAACAAGTCACGTGATGTGCCATCAAACGAAGGCAGGTGTCTCAAAGTGAAGAAATCAGCCCAAGTCATAAATAGTTTCGAGGATCCTGAGGACAAATAAGAAGGCACTAAGGCAGCGACGACCTTGTCAGACGAATTTTCTACGACTTACTACACCCCAGCGTTATATACACGCATTATATACACTTTGTAGCGTCTTTCTGATTTGTCGTTTGCAATTACTAGAACTGAGCAAAGTGAAAAACAGAAGACCTTCACCTGTTCGATGCACACTTACTCGGTTTGTTAGTGGTTAGCTGTTCAGAGCATTCAATGCGGTTCCTTGTTTAAAACCTAGTTATAATGCACTACACGGTTTCACCTGAGGGAGCGTATGCCTAGGAACAGCCCGCAATCACATTACACAACATACTCTTCCTTCAGCCAATAGCAGCATCTCTCAGTAAGAATGCGGTGGCTAAAAGCAATGAAGGGGgagaaagaagatgaaagagCACCATTGCcaagaaatgcatttatatgaaagaGTTTAAAATGGACTACGAGAGTGACTTCAATGTGAAAGCAGAGCGAGCCGACAAGTAGTGTTCATTAATACGCAGGAACGGTTCCCATCAAACCTTATGTTCATATGCACAGGGGGCTTTTATCGTTTTGGGAAAGTGTTATTGCCACAGGAATCTCTGCGAACCCTGAATGAAAATTAGACTAAAATAATGGGATATGATCTGTAGATTGTCAATATTCCTAAGAGTAAGCCTCAGTCACTGctgtcgtcgtcgtcgtcgtcgtctgAGATATTGTTGAGCTCCGAGCGGCTGTAGGAGTCTGAGCGGGACGGGAGGGTGCCGCCCGTGGAGAGCTGCTTGTAACAGAACTCGCACACCCGCACCGGTTTGGATGACTGACTGGGAAGCAGGAACTTCTTCTCTGAACACGGGCCGCACACGACAAAGCCGCATTTCCGGCAGTGGTGGCGGCGGTTGACCGGGGTGAATTTCATCTTCTGGCAGCGCATGCACACTGTCGCCTCCGAGTCGGGCACCCAGACGGCCGCGTGCTCGCCGGTGGGAGATTTCCCGCTTTTTTCCAGCAGATCCGAGACGCACTTGCTGATGTGGCTCATCCACTCGGACTTCTCCGTTGCCGTGGCGGCGTAGACGGCGAAGGATTTGGTAGGCGTTTTAATGAGCCAGCCGTTGCGCAGGTCGCCCTCGTCTTCTACCGTGTCTATGGTGACGCTCTCCAGAGGGATGATGTGCTGCTTATTGTACTTCTTCTTCTGGATGACGATGTTGCCGTACACCAGGATGTCGTTGAAGAGGAAGAACTGCCGGGCTTTGGGTCTTTTGCGACATAACTTTGTCAGAACGCCCTCTCCGATCAGCACTCGACCTGGGATGGCCAGCGGTTGACCTGCGGTGCCAAAGCATGCTTCCACGACTCCGATGCGCTTAGAGTTGGCCTCACTGTTCGCCAAGCGGTCTACCATCTTTCAA

Function

symbol description
plekhf2 Predicted to enable phosphatidylinositol binding activity. Predicted to act upstream of or within protein transport. Predicted to be located in early endosome membrane and endoplasmic reticulum. Orthologous to human PLEKHF2 (pleckstrin homology and FYVE domain containing 2).

NR:

description
PREDICTED: pleckstrin homology domain-containing family F member 2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU169949 True 2862 TUCP 0.44 2 21375890 21378836

Neighbor

gene id symbol gene type direction distance location
LOC122360424 LOC107666780,LOC107717381,LOC107600549,LOC107713810,LOC107591947,LOC107668291,LOC101885642 coding downstream 10689 21360793 ~ 21365201 (-)
nagpa nagpa,LOC107591935,LOC107668288,LOC107666791,LOC107717356,LOC107600512,LOC107713811 coding downstream 29290 21333650 ~ 21346600 (-)
tp53inp1 tp53inp1,LOC107666795,LOC107717380,LOC107600511,LOC107591975,LOC107668322 coding downstream 45899 21322911 ~ 21329991 (-)
ccne2 ccne2,LOC107717358,LOC107666792,LOC107600548 coding downstream 54803 21315779 ~ 21321087 (-)
LOC122361118 gbp,LOC107666878,LOC107717378,LOC107600509,LOC107668283,LOC107713814 coding downstream 206486 21167981 ~ 21169404 (-)
cfap418 LOC107666820,LOC107668311,LOC107592823,LOC107600550,LOC107591919 coding upstream 26427 21405263 ~ 21408968 (-)
trnas-aga_117 NA coding upstream 30108 21408944 ~ 21409025 (-)
rspo3 rspo3,LOC107666888,LOC107713808,LOC107600514,LOC107591889 coding upstream 34032 21412868 ~ 21431807 (-)
trmt11 trmt11,LOC107668323,LOC107713829,LOC107567767,LOC107730191,LOC107666854,LOC107600515 coding upstream 261261 21640097 ~ 21651111 (-)
hint3 hint3 coding upstream 275483 21654319 ~ 21656720 (-)
G115051 NA non-coding downstream 44532 21331012 ~ 21331358 (-)
G115042 si:dkey-22o22.2,LOC107668308,LOC107713796,LOC107592533,LOC107666790,LOC107717379,LOC107600533 non-coding downstream 61144 21283464 ~ 21314746 (-)
G114997 NA non-coding downstream 255306 21118149 ~ 21120584 (-)
G114947 NA non-coding downstream 540655 20781803 ~ 20835235 (-)
G114943 NA non-coding downstream 606803 20768744 ~ 20769087 (-)
G115098 NA non-coding upstream 9979 21388815 ~ 21389147 (-)
G115155 NA non-coding upstream 446362 21825198 ~ 21825437 (-)
G115170 NA non-coding upstream 494990 21873826 ~ 21874051 (-)
G115262 NA non-coding upstream 851404 22230240 ~ 22237066 (-)
G115335 NA non-coding upstream 1304591 22683427 ~ 22683638 (-)
G115003 cpne4a,LOC107592564,LOC107600547,LOC107666882,LOC107713817 other downstream 358785 21012607 ~ 21017105 (-)
G114901 NA other downstream 722316 20651977 ~ 20653574 (-)
scn1ba scn1b,scn1ba,LOC107666845,LOC107737825,LOC107719111,LOC107686587 other downstream 724953 20636125 ~ 20650937 (-)
G114793 NA other downstream 923440 20441965 ~ 20452450 (-)
G114715 NA other downstream 1198132 20166795 ~ 20177758 (-)
mettl6 mettl6,LOC107600537 other upstream 31123 21409959 ~ 21411772 (-)
trnae-cuc_38 NA other upstream 31124 21409960 ~ 21410031 (-)
G115116 NA other upstream 181385 21560221 ~ 21561216 (-)
cenpw cenpw,LOC107600551,LOC107668290,LOC107666774,LOC107567752 other upstream 227122 21605958 ~ 21614203 (-)
G115141 NA other upstream 325182 21704018 ~ 21704959 (-)

Expression


Co-expression Network