G115098


Basic Information

Item Value
gene id G115098
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056714.1
NCBI id CM032083.1
chromosome length 28146790
location 21388815 ~ 21389147 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU169954
GTTTTATACATTTGGCATATGAAATGACGGGCCACATTGCTTTGGTTTATGTCATACAACATCTATACAACATTAAGCTGGCTATTATATCACTCTGCAACCAGCTTATTGCTCATCcaaattctaaaataaaccacaaataaaattaGCCACTGTCGACTTGGGAGTCATTTAAACTGTCCTTTCTGTCACTCCTGTGTTCCTAGTTCAATGAAAGCATGATAAGCAAACTGTGTCCATGTGAACTGGCCTTTGCAGACCTTATTGTCATTGAGCCGGTGATGTCCGCCTCTCCACAGACCAGTCCATAACTAATGCAAATGATAATGCATT

Function

GO:

id name namespace
GO:0016832 aldehyde-lyase activity molecular_function
GO:0004332 fructose-bisphosphate aldolase activity molecular_function
GO:0004064 arylesterase activity molecular_function

KEGG:

id description
ko00010 Glycolysis / Gluconeogenesis
ko00680 Methane metabolism
ko00830 Retinol metabolism
ko00980 Metabolism of xenobiotics by cytochrome P450
ko00982 Drug metabolism - cytochrome P450
ko05204 Chemical carcinogenesis - DNA adducts

RNA

RNA id representative length rna type GC content exon number start site end site
TU169954 True 333 lncRNA 0.39 1 21388815 21389147

Neighbor

gene id symbol gene type direction distance location
LOC122360424 LOC107666780,LOC107717381,LOC107600549,LOC107713810,LOC107591947,LOC107668291,LOC101885642 coding downstream 23614 21360793 ~ 21365201 (-)
nagpa nagpa,LOC107591935,LOC107668288,LOC107666791,LOC107717356,LOC107600512,LOC107713811 coding downstream 42215 21333650 ~ 21346600 (-)
tp53inp1 tp53inp1,LOC107666795,LOC107717380,LOC107600511,LOC107591975,LOC107668322 coding downstream 58824 21322911 ~ 21329991 (-)
ccne2 ccne2,LOC107717358,LOC107666792,LOC107600548 coding downstream 67728 21315779 ~ 21321087 (-)
LOC122361118 gbp,LOC107666878,LOC107717378,LOC107600509,LOC107668283,LOC107713814 coding downstream 219411 21167981 ~ 21169404 (-)
cfap418 LOC107666820,LOC107668311,LOC107592823,LOC107600550,LOC107591919 coding upstream 16116 21405263 ~ 21408968 (-)
trnas-aga_117 NA coding upstream 19797 21408944 ~ 21409025 (-)
rspo3 rspo3,LOC107666888,LOC107713808,LOC107600514,LOC107591889 coding upstream 23721 21412868 ~ 21431807 (-)
trmt11 trmt11,LOC107668323,LOC107713829,LOC107567767,LOC107730191,LOC107666854,LOC107600515 coding upstream 250950 21640097 ~ 21651111 (-)
hint3 hint3 coding upstream 265172 21654319 ~ 21656720 (-)
G115051 NA non-coding downstream 57457 21331012 ~ 21331358 (-)
G115042 si:dkey-22o22.2,LOC107668308,LOC107713796,LOC107592533,LOC107666790,LOC107717379,LOC107600533 non-coding downstream 74069 21283464 ~ 21314746 (-)
G114997 NA non-coding downstream 268231 21118149 ~ 21120584 (-)
G114947 NA non-coding downstream 553580 20781803 ~ 20835235 (-)
G114943 NA non-coding downstream 619728 20768744 ~ 20769087 (-)
G115155 NA non-coding upstream 436051 21825198 ~ 21825437 (-)
G115170 NA non-coding upstream 484679 21873826 ~ 21874051 (-)
G115262 NA non-coding upstream 841093 22230240 ~ 22237066 (-)
G115335 NA non-coding upstream 1294280 22683427 ~ 22683638 (-)
G115496 NA non-coding upstream 1384619 22773766 ~ 22774032 (-)
G115093 plekhf2,LOC107666819,LOC107600513,LOC107668314,LOC107591926 other downstream 9979 21375890 ~ 21378836 (-)
G115003 cpne4a,LOC107592564,LOC107600547,LOC107666882,LOC107713817 other downstream 371710 21012607 ~ 21017105 (-)
G114901 NA other downstream 735241 20651977 ~ 20653574 (-)
scn1ba scn1b,scn1ba,LOC107666845,LOC107737825,LOC107719111,LOC107686587 other downstream 737878 20636125 ~ 20650937 (-)
G114793 NA other downstream 936365 20441965 ~ 20452450 (-)
mettl6 mettl6,LOC107600537 other upstream 20812 21409959 ~ 21411772 (-)
trnae-cuc_38 NA other upstream 20813 21409960 ~ 21410031 (-)
G115116 NA other upstream 171074 21560221 ~ 21561216 (-)
cenpw cenpw,LOC107600551,LOC107668290,LOC107666774,LOC107567752 other upstream 216811 21605958 ~ 21614203 (-)
G115141 NA other upstream 314871 21704018 ~ 21704959 (-)

Expression


Co-expression Network