cenpw (cenpw,LOC107600551,LOC107668290,LOC107666774,LOC107567752)


Basic Information

Item Value
gene id cenpw
gene name cenpw,LOC107600551,LOC107668290,LOC107666774,LOC107567752
gene type misc
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056714.1
NCBI id CM032083.1
chromosome length 28146790
location 21605958 ~ 21614203 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU169974
AACGCGCGATATTTTGAAAACAACGAAAAACAAACAGTCGCGAGCTTTATTTTCGATCTCCAAAACGGTAAACTAACGCCCTGTAGCAATCAAAACATGTCAAAGAAAGCCCCGAGAGCAGCCCTGAAGCTCCGTATGAAGAAGAACGCTAGCATACGGGTAGGAAAAAACGCAGACCTGATGGCCCAGCTCAACCTCCTGGTTATCCTGCATCGTCTAGCGGAGGAGTCCAGGGTGAAAGCATTTGAGGAGAAATCGGCAACTATCAAAGTTCACCACGTCAGAGCTGTTGCAAAGAAACTGTTAAAGAGCACACGTGGATAACATGGATGACGGGAGTTCCCCATCACAATCCTTTATTTGTTCAACAGCATTGACCCCATGAACTAACATTTACTTAAAGACATCAATATGTGTGAGCTACAGTACAGAGCACACAGCGTATGTGGACTATAAAAgatgaacatttaattttattcattctttagTACTTTTATGCGCACAATGGAATTTATGTTGCCATGTCTCAGCGTTGGACACATTTTAAGGCTGTGATCCGTTTCTCTACGattgttacatttttgcttctagttttgtttaaatcatGTATGATGGACAGTATCTAGCCCAGATATCTAAAGCAACACATGTGTCCCTCATCTCGTTGGATCGTATTTTGACTTAATACCTGTTAATAAACAATTTGT
>XM_043261465.1
GTCATCACCAGGAGCCGGTAGTGAAACGCGCGATATTTTGAAAACAACGAAAAACAAACAGTCGCGAGCTTTATTTTCGATCTCCAAAACGGTAAACTAACGCCCTGTAGCAATCAAAACATGTCAAAGAAAGCCCCGAGAGCAGCCCTGAAGCTCCGTATGAAGAAGAACGCTAGCATACGGGTAGGAAAAAACGCAGACCTGATGGCCCAGCTCAACCTCCTGGTTATCCTGCATCGTCTAGCGGAGGAGTCCAGGGTGAAAGCATTTGAGGAGAAATCGGCAACTATCAAAGTTCACCACGTCAGAGCTGTTGCAAAGAAACTGTTAAAGAGCACACGTGGATAACATGGATGACGGGAGTTCCCCATCACAATCCTTTATTTGTTCAACAGCATTGACCCCATGAACTAACATTTACTTAAAGACATCAATATGTGTGAGCTACAGTACAGAGCACACAGCGTATGTGGACTATAAAAgatgaacatttaattttattcattctttagTACTTTTATGCGCACAATGGAATTTATGTTGCCATGTCTCAGCGTTGGACACATTTTAAGGCTGTGATCCGTTTCTCTACGattgttacatttttgcttctagttttgtttaaatcatGTATGATGGACAGTATCTAGCCCAGATATCTAAAGCAACACATGTGTCCCTCATCTCGTTGGATCGTATTTTGACTTAATACCTGTTAATAAACAATTTGTACCACTTAACTTGGTTAACACA

Function

symbol description
cenpw Predicted to enable DNA binding activity and protein heterodimerization activity. Acts upstream of or within central nervous system development and regulation of mitotic cell cycle. Predicted to be active in kinetochore and nucleoplasm. Is expressed in digestive system; heart; kidney; nervous system; and pectoral fin bud. Orthologous to human CENPW (centromere protein W).

NR:

description
centromere protein W

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU169974 False 707 lncRNA 0.41 3 21605980 21614179
XM_043261465.1 True 753 mRNA 0.41 3 21605958 21614203

Neighbor

gene id symbol gene type direction distance location
rspo3 rspo3,LOC107666888,LOC107713808,LOC107600514,LOC107591889 coding downstream 174151 21412868 ~ 21431807 (-)
trnas-aga_117 NA coding downstream 196933 21408944 ~ 21409025 (-)
cfap418 LOC107666820,LOC107668311,LOC107592823,LOC107600550,LOC107591919 coding downstream 196990 21405263 ~ 21408968 (-)
LOC122360424 LOC107666780,LOC107717381,LOC107600549,LOC107713810,LOC107591947,LOC107668291,LOC101885642 coding downstream 240757 21360793 ~ 21365201 (-)
nagpa nagpa,LOC107591935,LOC107668288,LOC107666791,LOC107717356,LOC107600512,LOC107713811 coding downstream 259358 21333650 ~ 21346600 (-)
trmt11 trmt11,LOC107668323,LOC107713829,LOC107567767,LOC107730191,LOC107666854,LOC107600515 coding upstream 25894 21640097 ~ 21651111 (-)
hint3 hint3 coding upstream 40116 21654319 ~ 21656720 (-)
osbpl10b osbpl10,LOC107600617,LOC107713824,LOC107551176,LOC107705753,LOC107668315 coding upstream 308759 21922962 ~ 21961491 (-)
kiaa1143 kiaa1143,zgc:77056,LOC107713807,LOC107600662,LOC107551194,LOC107679647 coding upstream 354634 21968837 ~ 21970707 (-)
zdhhc3a zdhhc3a,zdhhc3,LOC107679645,LOC107600619,LOC107666804,LOC105908916 coding upstream 358469 21972672 ~ 21982803 (-)
G115098 NA non-coding downstream 216811 21388815 ~ 21389147 (-)
G115051 NA non-coding downstream 274600 21331012 ~ 21331358 (-)
G115042 si:dkey-22o22.2,LOC107668308,LOC107713796,LOC107592533,LOC107666790,LOC107717379,LOC107600533 non-coding downstream 291212 21283464 ~ 21314746 (-)
G114997 NA non-coding downstream 485374 21118149 ~ 21120584 (-)
G114947 NA non-coding downstream 770723 20781803 ~ 20835235 (-)
G115155 NA non-coding upstream 210995 21825198 ~ 21825437 (-)
G115170 NA non-coding upstream 259623 21873826 ~ 21874051 (-)
G115262 NA non-coding upstream 616037 22230240 ~ 22237066 (-)
G115335 NA non-coding upstream 1069224 22683427 ~ 22683638 (-)
G115496 NA non-coding upstream 1159563 22773766 ~ 22774032 (-)
G115116 NA other downstream 44742 21560221 ~ 21561216 (-)
mettl6 mettl6,LOC107600537 other downstream 194186 21409959 ~ 21411772 (-)
trnae-cuc_38 NA other downstream 195927 21409960 ~ 21410031 (-)
G115093 plekhf2,LOC107666819,LOC107600513,LOC107668314,LOC107591926 other downstream 227122 21375890 ~ 21378836 (-)
G115003 cpne4a,LOC107592564,LOC107600547,LOC107666882,LOC107713817 other downstream 588853 21012607 ~ 21017105 (-)
G115141 NA other upstream 89815 21704018 ~ 21704959 (-)
G115149 NA other upstream 187272 21801475 ~ 21803804 (-)
G115207 gpd1l,LOC107705153,LOC107713825,LOC107551192,LOC107666803,LOC107600618,LOC108434205 other upstream 350652 21964855 ~ 21968535 (-)
eny2 eny2,LOC107600664,LOC107551183,LOC105908906 other upstream 473438 22087641 ~ 22089092 (-)
cdc42se1 cdc42se1,LOC107704996,LOC107705438,LOC107588480,LOC107700699,LOC107556109,LOC105018866 other upstream 1277899 22892102 ~ 22901187 (-)

Expression


Co-expression Network