G115536 (bnipl,LOC107755792,LOC107556108,LOC107755808)


Basic Information

Item Value
gene id G115536
gene name bnipl,LOC107755792,LOC107556108,LOC107755808
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056714.1
NCBI id CM032083.1
chromosome length 28146790
location 22885715 ~ 22888001 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU170565
aaaaaaaaaaaaaattatacaatactattttatattcagAGAACTGTATTTAAGTGAATTATTGGTTTATTCCCTTTCTTGCTTtgcatagtaaaaaaaagaaactgcgGAAAGATTAGCTAAAATGTCTTTATCACAGGGCTTTCCCTTTAGATTCAGTAGGATTCAGTTAATTTTCCTCCTCACAGTTCCTTTTCGTGCGAcgtcatgctttttttgtgttgttttcttgttgCTGTCTGTACAGTCAGCAGCTTATGAGTGATCTCAGAGGAAACTTCATGCAGTGACGCAACGGAGCCAGCAGGAATGACAAACCAGGCTTTCGAGAGCATCCCACACTCGCCAGTTCCTCATTTCCCGAACCGATTTCACATGATAAGATGACCTTGAATTTCCTGACTATACAAAATCctcacataaaacatttatgagaCTGACCTTCACCTGGAAGACGAACTGTTAGACAGCCGTAACATAAGATAATTTACATTGTAATTCTTTGCTTCAGACCATTTCAGAATCCTGTGCTGATCCTAATCGCCCCATCAGGTTTATTTTGGGATAATGACTGGCCGGTTGTACATAACCAACTACATGGCGATTTTGTACGTAACATTGGCGTCCATCGAGAACAGCCACACTGGCCTTGGAGAGCGAACGCTAAAGTTTTAAACCTTAAAGAACTAATCCGCAATGAAGTACGCaatctaaaaatgtctaaatatagcaacaaaaacaagaaaacatgaCAGCTGAGAACAGGTCAAGGGTTATCTAAAGGAATGTCTGGAAGAACTCCGATAAAGCGGCCTTCTATGTATGAGTCCACAGCATTCCTATCATATTTCATAAGAGGGGCattaagaaagagagagtggaGGTGGGTTCTCATGTTTAACACAAGCTGAACCAAAGAAGCAGGAAGACTGTCACAGGCAGAGATTAGACACACACGCCCTCTTCTGGAACTGATGGAAAATGACACAGTAGAAACCAAAATAGTATTGTGGCCTTTTTAAGGCAAGTGTCTTTGTCTACACTAAAGTTTAAAGATACAGTAAACACAGTgatgctgtgaaatattattacaattatatgttagtgtttttattttattttaaaatgttatttatttctgtgatggtaaaGTGGAATTTTCAGCAGGCACTGCTACGAaaatcagtgtcacatgatcctccttattattatcaatgtttaaaacagttgttcagcaaattatttgagaaaaaaagtagTTCTTATGACCACAATCTTTTAAACAGTTGAGCATATgctattgttttctttaaaaaaattacaaaataaacttaaaattttaaaattagtcTTTCTcttgtgaatttgttttttttaccaaacaTATTGATCATATCCTCTCTTGCTCAGAGgtgtatacatattttttctcaaataaaattattttctcatcCCCAAATGTCATCTTCCACCAATTAGCAAATAGCATgcagcataatttttttttttttcaggctgtgCCTATTGGCTATCAGCCTTTTTTGTTGGCCACATGAGAGGGCAAAAATAGAATCAGTCAATAATACCAttacataataacataaattgATTGTTGTTTTcaattataaattttttatcTTGAcggaaaaaaatcacagaatggCTGACCTTCTGTCGATGGACATGTAACACTGGCGAAGCCACTTAATCCCAGGCATCTTATTGCGAGGCGCCATTCCACACAGATACACCAATATGTAATTCTCAGACACCATCAAGTCCAGCGTGCCGATAATGTACCTAAATCTGAAGAGATTGTCCATCACATACTCATAGTGTTCGGTTGTATTTTCTGGTAGGTAACAGGAAGTAAACATGATGATGGCCGTTGATCCGTCCCCAAAATATCCTATAAAAGGTCAATTTCAGTTGGTAAATAATTTCAGTGAGGCATGTTCATTCCAGCCAGTTCAACAAAAGCTCACCTCCATGTGAAAGAACTTGAAGGTAGGGCTCCAGAACGCTCATATTGACTTGGTAGTCTTGGCCTCCAATATGAAATCGCCTCCATCGCCGCCCACTGCTGTCCACCTGATCCAAGTCCAGGTGTCCCATTTCCGCGTGCTCGAGTAAACTGGCTTTTCTGATGGCTGCTTTGCCCATCCTTGGAAGATCATCTGCAGTGACCACAGCACTAGAGGTAAG

Function

symbol description
bnipl Predicted to enable exopolyphosphatase activity. Predicted to be involved in apoptotic process and polyphosphate catabolic process. Predicted to be active in cytoplasm. Orthologous to human BNIPL (BCL2 interacting protein like).

NR:

description
PREDICTED: BCL2/adenovirus E1B 19 kDa protein-interacting protein 2-like isoform X2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU170565 True 2205 lncRNA 0.38 2 22885715 22888001

Neighbor

gene id symbol gene type direction distance location
si:dkey-23o4.6 LOC107681430,LOC107705890,LOC107697223,LOC107756193,LOC107556114 coding downstream 70620 22812569 ~ 22815095 (-)
plekho1b plekho1b,LOC107705315,LOC107681431,LOC107588474,LOC107755867,LOC107556112,LOC107697224 coding downstream 88695 22779235 ~ 22797020 (-)
mrap2a mrap2,mrap2a,LOC107705305,LOC107681427,LOC107556088,LOC107697221 coding downstream 118427 22763204 ~ 22767288 (-)
tsnare1 tsnare1,si:ch211-208k15.1,LOC107679652,LOC101472715 coding downstream 361965 22419870 ~ 22523750 (-)
snrnp48 LOC107679653,LOC107551179,LOC107756216,LOC107600666 coding downstream 534672 22347650 ~ 22351043 (-)
LOC122359864 LOC107705376,LOC107704993,LOC107755727,LOC107700703 coding upstream 27966 22915967 ~ 22929917 (-)
LOC122359931 decr1,LOC107704989,LOC107705494,LOC107756153,LOC107700707 coding upstream 89924 22977925 ~ 22982891 (-)
LOC122360867 phf20l1,LOC107587800,LOC107704904 coding upstream 176744 23064745 ~ 23072189 (-)
LOC122360042 LOC107587797,LOC107714594,LOC107704906 coding upstream 193228 23081229 ~ 23089594 (-)
LOC122360196 NA coding upstream 201956 23089957 ~ 23096651 (-)
G115496 NA non-coding downstream 111683 22773766 ~ 22774032 (-)
G115335 NA non-coding downstream 202077 22683427 ~ 22683638 (-)
G115262 NA non-coding downstream 648649 22230240 ~ 22237066 (-)
G115170 NA non-coding downstream 1011664 21873826 ~ 21874051 (-)
G115155 NA non-coding downstream 1060278 21825198 ~ 21825437 (-)
G115548 LOC107704994,LOC107705391,LOC107588482,LOC107755744,LOC107700704,LOC107556105 non-coding upstream 22878 22910879 ~ 22911323 (-)
G115559 pnp4b,LOC107704990,LOC107700705,LOC107705461,LOC107755717,LOC107588484,LOC107556080,LOC108437351 non-coding upstream 70683 22958684 ~ 22960933 (-)
G115579 NA non-coding upstream 108958 22996959 ~ 22997389 (-)
G115581 NA non-coding upstream 112160 23000161 ~ 23000665 (-)
G115582 NA non-coding upstream 114014 23002015 ~ 23003118 (-)
eny2 eny2,LOC107600664,LOC107551183,LOC105908906 other downstream 796623 22087641 ~ 22089092 (-)
G115207 gpd1l,LOC107705153,LOC107713825,LOC107551192,LOC107666803,LOC107600618,LOC108434205 other downstream 917180 21964855 ~ 21968535 (-)
G115149 NA other downstream 1081911 21801475 ~ 21803804 (-)
G115141 NA other downstream 1180756 21704018 ~ 21704959 (-)
cenpw cenpw,LOC107600551,LOC107668290,LOC107666774,LOC107567752 other downstream 1271512 21605958 ~ 21614203 (-)
cdc42se1 cdc42se1,LOC107704996,LOC107705438,LOC107588480,LOC107700699,LOC107556109,LOC105018866 other upstream 4101 22892102 ~ 22901187 (-)
G115554 NA other upstream 44626 22932627 ~ 22933967 (-)
G115882 pou3f2,pou3f2b,LOC106584047,LOC106605033,LOC107711728,LOC107704941,LOC107700690 other upstream 631807 23519808 ~ 23524382 (-)
usp45 usp45,LOC107716853,LOC107587766,LOC107711747,LOC107552817,LOC107704836 other upstream 694992 23582993 ~ 23609841 (-)
mchr2a mchr2,si:dkey-165n16.5,LOC107587893,LOC107597140,LOC107700674,LOC107716821,LOC107711724 other upstream 780064 23668065 ~ 23675345 (-)

Expression


Co-expression Network