G115611


Basic Information

Item Value
gene id G115611
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056714.1
NCBI id CM032083.1
chromosome length 28146790
location 23072259 ~ 23073450 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU170681
CGTGCGCGCGCACGCACGTCCAGTTTGGGTAAAAGTAACTGAGCTGGAATGAATACAATACACTATAGGAATTAATTGCTATTCTCTAAATGAATTTTCAAAGGTCCGTCCACAGGACGAGAGAGCATTTGTGTCTTGAGAAAGACCTGGTAAGAGTACACTCAAAATGAGCAAGAAACCTCCAAATCGACCAGGGATCTCTTTTGAGGTTGGCGCCAGGGTTGAGGCCCAGGACTACCTGCAAAATGGTAAGAGTTAATTTTGAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU170681 True 267 lncRNA 0.44 2 23072259 23073450

Neighbor

gene id symbol gene type direction distance location
LOC122360867 phf20l1,LOC107587800,LOC107704904 coding downstream 70 23064745 ~ 23072189 (-)
LOC122359931 decr1,LOC107704989,LOC107705494,LOC107756153,LOC107700707 coding downstream 89368 22977925 ~ 22982891 (-)
LOC122359864 LOC107705376,LOC107704993,LOC107755727,LOC107700703 coding downstream 142342 22915967 ~ 22929917 (-)
si:dkey-23o4.6 LOC107681430,LOC107705890,LOC107697223,LOC107756193,LOC107556114 coding downstream 257164 22812569 ~ 22815095 (-)
plekho1b plekho1b,LOC107705315,LOC107681431,LOC107588474,LOC107755867,LOC107556112,LOC107697224 coding downstream 275239 22779235 ~ 22797020 (-)
LOC122360042 LOC107587797,LOC107714594,LOC107704906 coding upstream 7779 23081229 ~ 23089594 (-)
LOC122360196 NA coding upstream 16507 23089957 ~ 23096651 (-)
LOC122360198 LOC107671893,LOC107724791,LOC107552796 coding upstream 23817 23097267 ~ 23102702 (-)
LOC122360201 LOC107724792,LOC107552857 coding upstream 29720 23103170 ~ 23109883 (-)
rbp5 rbp5,LOC107714611,LOC107704908,LOC107724800,LOC107671900,LOC108263531,LOC108443655 coding upstream 44048 23117498 ~ 23121209 (-)
G115601 rcc1,LOC107597108,LOC107700729,LOC107704965 non-coding downstream 15729 23056095 ~ 23056530 (-)
G115599 NA non-coding downstream 19984 23050307 ~ 23052275 (-)
G115598 NA non-coding downstream 22416 23049549 ~ 23049843 (-)
G115597 phactr4b,LOC107587745,LOC107704841,LOC107597106 non-coding downstream 23564 23046482 ~ 23048695 (-)
G115596 NA non-coding downstream 25966 23046022 ~ 23046293 (-)
G115563 LOC101883708,LOC105900568,LOC106574835 non-coding upstream 853 23074303 ~ 23077870 (-)
G115621 NA non-coding upstream 91743 23165193 ~ 23167940 (-)
G115631 NA non-coding upstream 111600 23185050 ~ 23189650 (-)
G115669 NA non-coding upstream 252758 23326208 ~ 23327893 (-)
G115910 NA non-coding upstream 742447 23815897 ~ 23816157 (-)
G115554 NA other downstream 138292 22932627 ~ 22933967 (-)
cdc42se1 cdc42se1,LOC107704996,LOC107705438,LOC107588480,LOC107700699,LOC107556109,LOC105018866 other downstream 171072 22892102 ~ 22901187 (-)
eny2 eny2,LOC107600664,LOC107551183,LOC105908906 other downstream 983167 22087641 ~ 22089092 (-)
G115207 gpd1l,LOC107705153,LOC107713825,LOC107551192,LOC107666803,LOC107600618,LOC108434205 other downstream 1103724 21964855 ~ 21968535 (-)
G115149 NA other downstream 1268455 21801475 ~ 21803804 (-)
G115882 pou3f2,pou3f2b,LOC106584047,LOC106605033,LOC107711728,LOC107704941,LOC107700690 other upstream 446358 23519808 ~ 23524382 (-)
usp45 usp45,LOC107716853,LOC107587766,LOC107711747,LOC107552817,LOC107704836 other upstream 509543 23582993 ~ 23609841 (-)
mchr2a mchr2,si:dkey-165n16.5,LOC107587893,LOC107597140,LOC107700674,LOC107716821,LOC107711724 other upstream 594615 23668065 ~ 23675345 (-)
phactr4b phactr4b,LOC107587745,LOC107597106,LOC107700669 other upstream 1244032 24317482 ~ 24339788 (-)
LOC122359997 LOC107732827,LOC107704842,LOC107587847,LOC107700682,LOC107756122,LOC107597135 other upstream 1291190 24364640 ~ 24369566 (-)

Expression


Co-expression Network