G115621


Basic Information

Item Value
gene id G115621
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056714.1
NCBI id CM032083.1
chromosome length 28146790
location 23165193 ~ 23167940 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU170695
CCATATTTGATGGTGGAATTCATTGTGAAACATTGTTACCCATGATTCTATAGAGAAATATACACCAATTGTTGAATCGCCCAGGAAAATTGTGCCAAAAGACCTCTTTGGCACTAGCCACACCCATAATGTACTGTAATCAAGTAATTTTCCTATGctacatatatgcatattttgcaataaacataaaatatattgtttctatatctttacttaattttaaagcaCTAGTTTAGTATTTCTAACTTTTTATCCGACTGTTATTCTCAGTGCTCTATTTGATTGGAGTGTTTTCCCTCAAGTGCTTTTGTCCGATATTTATTTGcttcaaatcaaaattttaGTTTTGCGATTCACCTTTTAGGATCGGTTTATGGCTTTTAACTCCTTAACAAAGATTCCTTTTGGGAAAAATtaataggggaaaaaaaactactgaaCTACAGGCTACTGAACCACACTTTTTTTCTAGCACCAAAAGCGCTTAAGCCAaactcagaaaaacaaacatttaaacatatgtACATCAGTGTGGTAAGAACTACCTAAAATGTCAGTAGCCATCTTGATAgtgtaattagattttttttattttttttgccaccAGGGGGCGTTTAAAACTTTTCAGAATGTGTGTGGCACATTTGTTTCACCAGGTTCCATCTCAGTTAGAGTTCTGCCTTAGATAGGCAGTCGTCAGCTATTCAGCGCAGTAGTTTTTTGAACAGAGCCACTGTAACATACCTCTGTGGCTCCATCAAAGCGCTCTTTCAGCACAGCACCGACCCGGCGGAACGGAGGCATGACCTTCCAGCAAGTTCTGAGCTCACAGGACCCCGAAACGCCGTGACACTTACACTCAACCTGCATGTTATGAAGGATCGCCTGAACAAATGCAGAGAAAACCGTGAAAACCGTGCAGCCTACGATGAGTTTTAATATCAGTGAAACATCTCACTCGCCTTTCGCCCTGCCTCATTGTTGTGAATGTTCATTAGCGGCCTCCCCGACGACATGCCTTTAGCTCTCTCTGGCTCATCCACAAAGGTCTGAGAGAATGCCACGCCATAGGACAGATTATCAGAGCAACCTGACCACTGGAAACCTAAGGCCGCATCTCTCCAGTTCTCCCCTGCTACAGCCTCGAGTCACAGCCACAGCGACTGCTGCTGATGAAAGAGCATGGACAAAAGCCGCCTCACGGGTGCCTGAAAACAACAGTGGAACAAAACCAAACTAAGTTGAGTACGGTTGAAGGTTGTTGGAAAATGGTCTGCTATTAATCGATAGTTTAACATCAGTACTCTGATATGGTGGTTGTCAAGCTGCATGAATATGTCcaacacaatatatattcataaatacttttttttttcggcCATGTTTTTAAAGGGTTCCTATTTGCCCAGTCATTCAGttgaaaaaacaattacataatttttccgaaatgaaatgaaaaagcttgaaatcatttgaaattacTTCATTATAGGCCATACCTTAGCCAAGATGGtaagatatattaaaaacttGTTCTGTATGTTGTGACAGTGTTTCGTTGAAACCTTGGTTCATGACTCGTCCAAAAATATTGATCCCGCGAGGGGTGGTGGAACAGTTCCAGCGGCGGTTTCGAAACTGATGTTGACACTGCAGTAgttaaaaccaaacaaatagcTGTAAACCAGAGTTTATATATCTAGATATGAAACCGTTTAAGCTTAAAGGTTAAAGCTCGTATTTGTGGGGCTGGTTGTCACAAGCAATAgagagaacagcattttttttgttagttttttttttcctctgtaacTTTTGCAGCGACAATCAGATCCAGAAAGAGCTATACTGCCAAGCGTGTTCACATACTCAAGGAATTAATCACGATTCTTTACCGTCACGTCCTTGAATGTCAGTGCTGTATGTTCACAAAATTGTCATTGCGTTTCAGTCTCGCTCACCTCCTCAATGACCATCTCTGCAGCCTTTCGCACGGACTCCATGACCTCCCCCCGTGCCCGGCACACCCCGACTTGGCCTGGTGTCAACCCCCTCAGACGGCCACATGGTTCTGCACCAGACACAGGACGCGAGCGTGGCAGACGTGCCAGAGAACTACACAGACAATACAGCACAGGAAACATGAATGCATACAcgtaaataaaagtacaatatatTGTAGGTAAATTGAAGCTGtagaagcaaacaaacaaacaaaatgatggCATAACAAACAAACTCTTTGACACAAGCCAACTTACAGCCAGTTGCTTGCCATGGTGAGGTGGGGTGCCCATAGCAACAGCAGGAGGAGTCGTCCCGTGAGAGTCACGGAGGACACCGTTGGCATCAGATTGCCTGTCTGTCTGACTACCTGTCTGTCTCTGAATTAGTGAGCAACGCTTGTTTCTTTTAGTCTTACAGCTGTGCCTGTTACGTTGGGGTTGTTCCCCTCATATCTGTCAAAGGaaataacatttctaattttgacATTGTTgcggttttcttttttaatataaccgCTTGTACTTAATCATTGCTTATGAATCAATACAATCAATACAGATTATTACTGGCATCagagtatatttatttatttttgttgtttaaatgaacaaaaagcaATATCTAAGCAAAGC

Function

GO:

id name namespace
GO:0050900 leukocyte migration biological_process
GO:0002376 immune system process biological_process
GO:0030595 leukocyte chemotaxis biological_process
GO:0060326 cell chemotaxis biological_process

KEGG:

id description
ko04612 Antigen processing and presentation

RNA

RNA id representative length rna type GC content exon number start site end site
TU170695 True 2639 lncRNA 0.41 2 23165193 23167940

Neighbor

gene id symbol gene type direction distance location
chd4b chd4,LOC107714608,LOC107724784,LOC107671917,LOC107704911 coding downstream 6291 23141067 ~ 23158902 (-)
ptpn6 ptpn6,LOC107714609,LOC107704909,LOC107671911,LOC107724803 coding downstream 26067 23122351 ~ 23139126 (-)
rbp5 rbp5,LOC107714611,LOC107704908,LOC107724800,LOC107671900,LOC108263531,LOC108443655 coding downstream 43984 23117498 ~ 23121209 (-)
LOC122360201 LOC107724792,LOC107552857 coding downstream 55310 23103170 ~ 23109883 (-)
LOC122360198 LOC107671893,LOC107724791,LOC107552796 coding downstream 62491 23097267 ~ 23102702 (-)
cdc42l cdc42l,LOC107552852,LOC108433756,LOC108272678,LOC105029961,LOC108443667 coding upstream 1578 23169518 ~ 23175441 (-)
rbfox1l rbfox1l,LOC107704918,LOC107587790,LOC107714602,LOC107724799,LOC107552848,LOC107672019,LOC103045177,LOC108443663 coding upstream 41619 23209559 ~ 23221351 (-)
rap1gapl si:ch1073-90m23.1,LOC107724779,LOC107587789,LOC107672182,LOC107704921,LOC107714601 coding upstream 56130 23224070 ~ 23233788 (-)
styk1b LOC107587900,LOC107714598,LOC107724775,LOC107704922,LOC107672192,LOC107552846 coding upstream 76316 23244256 ~ 23249797 (-)
LOC122359973 LOC107672119,LOC107552844,LOC107704924,LOC107716832 coding upstream 83620 23251560 ~ 23254576 (-)
G115563 LOC101883708,LOC105900568,LOC106574835 non-coding downstream 87323 23074303 ~ 23077870 (-)
G115611 NA non-coding downstream 91743 23072259 ~ 23073450 (-)
G115601 rcc1,LOC107597108,LOC107700729,LOC107704965 non-coding downstream 108663 23056095 ~ 23056530 (-)
G115599 NA non-coding downstream 112918 23050307 ~ 23052275 (-)
G115598 NA non-coding downstream 115350 23049549 ~ 23049843 (-)
G115631 NA non-coding upstream 17110 23185050 ~ 23189650 (-)
G115669 NA non-coding upstream 158268 23326208 ~ 23327893 (-)
G115910 NA non-coding upstream 647957 23815897 ~ 23816157 (-)
G115911 NA non-coding upstream 648960 23816900 ~ 23817100 (-)
G115914 cnr2,LOC107716825,LOC107704869,LOC107587892,LOC107700673,LOC107597120 non-coding upstream 652579 23820519 ~ 23822288 (-)
G115554 NA other downstream 231226 22932627 ~ 22933967 (-)
cdc42se1 cdc42se1,LOC107704996,LOC107705438,LOC107588480,LOC107700699,LOC107556109,LOC105018866 other downstream 264006 22892102 ~ 22901187 (-)
eny2 eny2,LOC107600664,LOC107551183,LOC105908906 other downstream 1076101 22087641 ~ 22089092 (-)
G115207 gpd1l,LOC107705153,LOC107713825,LOC107551192,LOC107666803,LOC107600618,LOC108434205 other downstream 1196658 21964855 ~ 21968535 (-)
G115149 NA other downstream 1361389 21801475 ~ 21803804 (-)
G115882 pou3f2,pou3f2b,LOC106584047,LOC106605033,LOC107711728,LOC107704941,LOC107700690 other upstream 351868 23519808 ~ 23524382 (-)
usp45 usp45,LOC107716853,LOC107587766,LOC107711747,LOC107552817,LOC107704836 other upstream 415053 23582993 ~ 23609841 (-)
mchr2a mchr2,si:dkey-165n16.5,LOC107587893,LOC107597140,LOC107700674,LOC107716821,LOC107711724 other upstream 500125 23668065 ~ 23675345 (-)
phactr4b phactr4b,LOC107587745,LOC107597106,LOC107700669 other upstream 1149542 24317482 ~ 24339788 (-)
LOC122359997 LOC107732827,LOC107704842,LOC107587847,LOC107700682,LOC107756122,LOC107597135 other upstream 1196700 24364640 ~ 24369566 (-)

Expression


Co-expression Network