G115669


Basic Information

Item Value
gene id G115669
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056714.1
NCBI id CM032083.1
chromosome length 28146790
location 23326208 ~ 23327893 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU170758
CGGAGAATGAAGAGACATCTTAAACTGGCATTTTCAAGGTGGACAACAGCTCGATACCAAATTTATTAGATCACTCTAAAGCATGGTACAACAAAAGAAGGAAGGAAATAAAGggaatggaaaacaaaacaaaaaaaaaacaaataactggCCATCTGATTGCAGCTGGAAATCATATTGAGTGCCAGACtcgcaaacaaaaacaactagaCCTACATATCAGCCGACACTTAAGAGCGGAGGACGGCGGTGATGATCAACAGAATGATTGCACTATACAGAACTAAACAGCTGTTCGGAAATACCAGTCGAGGAATTATtggaattaaatattatttgctaAATCAgaaaaaatgtaaacaggcgtttttctaataaatatttaggtCAAATTAAAAGCACTGGAAAGGCTCTGTTACAATCATGATCAGTTCCGCAGCTGGACTTTGCACAGGACCGTTCTCATAAAGagctgaaaaatacattttattctagTGGATCAGTTTTACAAATGGTTTGTGAGATAAATAGACTAAAAAGTTATCAAGTTACTGATCACTATCAAATAGTAATTGCCTAACATTTAACAATCTTTCAGGAAAAGGAGTTGAAGGTGCGTTACCAGTTGATCCATAACTTTCCGTTCTTTCTTCATTCATTAGGAATAAAAAAGGGGCAACTGTTATACAAGTTTGCATTATGCCACAGAAAACAGTGATACAATATTACTGGGGGGGAAGAAAAATGCTAAACTGGAAGTTTTTCTAGCTTTCTGTGTTCACTGCAATGCATATAGCTAGTTACcaaatatcatcatcatcatcatcaagaTCATCGCATGCGTTTCTTACACAAACTAGCAATGCAATATACACCATTACAGCCCATGTTTAACCGTTCCACTCAAACCACAAAGTGTTTGTGTCCTAAAAATACCCACCAAAAACTGGACGCAAGACGTAACTGATTAAATTTCTGATCagcccaataaaaaaaaatttggacGGAGACTAATCAATTGCTAAATGAGGTTTCAGGGCAGGTGTGATACTAAGCGAGTATGTAAATTGCAAATAAGTTCAGAGATGGATAAGGCATTCCAGGGGTACCtattatgcaaaatatgtgGATGTGGTAACCTAAAAGCTTGCTATTGTTAgtgtttgtgtcattttattcCACTCTCTGAAATAAGGCAGGAGCACTGTTGAGAATCTATGCACAAATGCATACTAAAATGTATGCACCAGTTGGACACATTCAGTTTTGCCGTTTCTTCTTTTATGTAGGCATTTCTGCATTCTCTCACCGACTACAGTGAGGGTAATCCAAGTGTAATCCTACAGTCGTGCAATAGGCCGCAAGTTTTCATCCCTTcgtaaaattcaaaaacactCCTTGCATATGCAGCTTGAATAAGCAATCCCTCAGTTAATCCCAGTAAAAGCAGTGATTGCAACTGCTGGCTTTCTGTTTCTCCCCCCCTCCCAATATGCGGATggcaaaatgttatataatcCACAGCGTCACGCTAATCCCTGCCCGTTCAAATCCAAACAGGTCAGAATCTTGTAATCTTTATTCCAGAGTCCCCAACAATCAAACGAGCCATGGAGGGAT

Function

GO:

id name namespace
GO:0042219 cellular modified amino acid catabolic process biological_process

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU170758 True 1620 lncRNA 0.38 2 23326208 23327893

Neighbor

gene id symbol gene type direction distance location
cnot3a cnot3a,LOC107711735,LOC107587779,LOC107700763,LOC107552836,LOC107704926 coding downstream 11447 23306694 ~ 23314761 (-)
LOC122359881 LOC107716830,LOC107587785,LOC107682987 coding downstream 59736 23264286 ~ 23266472 (-)
LOC122360080 NA coding downstream 64254 23258003 ~ 23261954 (-)
LOC122359973 LOC107672119,LOC107552844,LOC107704924,LOC107716832 coding downstream 71632 23251560 ~ 23254576 (-)
styk1b LOC107587900,LOC107714598,LOC107724775,LOC107704922,LOC107672192,LOC107552846 coding downstream 76411 23244256 ~ 23249797 (-)
kpna5 kpna5,LOC107704934,LOC107716841,LOC107552832,LOC107711738 coding upstream 11558 23339451 ~ 23348014 (-)
rwdd1 rwdd1,LOC107587776,LOC107704860,LOC107700695,LOC107552826 coding upstream 30580 23358473 ~ 23361374 (-)
calhm5.1 LOC107704861,LOC107716815,LOC107587898,LOC107711741,LOC107552825 coding upstream 34444 23362337 ~ 23367373 (-)
calhm6 fam26f,LOC107700692,LOC107552824,LOC107716816 coding upstream 39608 23367501 ~ 23368953 (-)
mms22l mms22l,LOC107716844,LOC107587771,LOC107711743,LOC107552829,LOC107700675 coding upstream 61530 23389423 ~ 23403630 (-)
G115631 NA non-coding downstream 136558 23185050 ~ 23189650 (-)
G115621 NA non-coding downstream 158268 23165193 ~ 23167940 (-)
G115563 LOC101883708,LOC105900568,LOC106574835 non-coding downstream 248338 23074303 ~ 23077870 (-)
G115611 NA non-coding downstream 252758 23072259 ~ 23073450 (-)
G115601 rcc1,LOC107597108,LOC107700729,LOC107704965 non-coding downstream 269678 23056095 ~ 23056530 (-)
G115910 NA non-coding upstream 488004 23815897 ~ 23816157 (-)
G115911 NA non-coding upstream 489007 23816900 ~ 23817100 (-)
G115914 cnr2,LOC107716825,LOC107704869,LOC107587892,LOC107700673,LOC107597120 non-coding upstream 492626 23820519 ~ 23822288 (-)
LOC122359981 NA non-coding upstream 716867 24044760 ~ 24057262 (-)
G115939 NA non-coding upstream 749738 24077631 ~ 24077867 (-)
G115554 NA other downstream 392241 22932627 ~ 22933967 (-)
cdc42se1 cdc42se1,LOC107704996,LOC107705438,LOC107588480,LOC107700699,LOC107556109,LOC105018866 other downstream 425021 22892102 ~ 22901187 (-)
eny2 eny2,LOC107600664,LOC107551183,LOC105908906 other downstream 1237116 22087641 ~ 22089092 (-)
G115207 gpd1l,LOC107705153,LOC107713825,LOC107551192,LOC107666803,LOC107600618,LOC108434205 other downstream 1357673 21964855 ~ 21968535 (-)
G115149 NA other downstream 1522404 21801475 ~ 21803804 (-)
G115882 pou3f2,pou3f2b,LOC106584047,LOC106605033,LOC107711728,LOC107704941,LOC107700690 other upstream 191915 23519808 ~ 23524382 (-)
usp45 usp45,LOC107716853,LOC107587766,LOC107711747,LOC107552817,LOC107704836 other upstream 255100 23582993 ~ 23609841 (-)
mchr2a mchr2,si:dkey-165n16.5,LOC107587893,LOC107597140,LOC107700674,LOC107716821,LOC107711724 other upstream 340172 23668065 ~ 23675345 (-)
phactr4b phactr4b,LOC107587745,LOC107597106,LOC107700669 other upstream 989589 24317482 ~ 24339788 (-)
LOC122359997 LOC107732827,LOC107704842,LOC107587847,LOC107700682,LOC107756122,LOC107597135 other upstream 1036747 24364640 ~ 24369566 (-)

Expression


Co-expression Network