G116282


Basic Information

Item Value
gene id G116282
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056714.1
NCBI id CM032083.1
chromosome length 28146790
location 25776736 ~ 25778404 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU171682
AAAcgtaaaatcattttattacaaacatccAAAAGCTTCATATTTACCGAACAATCATCGCACACAGGAATaacaatatatacatgtataaaacatagaaaatcaTAAAAGTAGGTGAGTTCTCATATTGCTAGTTCAATTTCAGTAGCTGCAACTTCAACAAAGCGGTGTGCGCGCCGCCACGAAGCCTGCATTTATACCCGTTTCAAACAACATGGCGCCGCAGGGAAATCATTTCAGCTGGGTTTTTGAAGACAGAAGTCCAAATAAGTTAATGTTTCAAAGCAACTCTTTCCCTGAGCACACAGGACTTGGGGAAACGGCCGCAGGATCAGAATTTGCAGCAGTATCCGCAGCCTTTGTTACGGCAGCAGTTGCAGCAGTATCTGCACAGAGACAGATGACTCTGACGCTTCACCCTGAACAGGGACTACAGAGaggaaacaaatgtaaaataacgtaaaatatatatatatatatatatataaatcaattataatacatattaattaattactgcatatatatatatatatatatata
>TU171683
AAAcgtaaaatcattttattacaaacatccAAAAGCTTCATATTTACCGAACAATCATCGCACACAGGAATaacaatatatacatgtataaaacatagaaaatcaTAAAAGTAGGTGAGTTCTCATATTGCTAGTTCAATTTCAGTAGCTGCAACTTCAACAAAGCGGTGTGCGCGCCGCCACGAAGCCTGCATTTATACCCGTTTCAAACAACATGGCGCCGCAGGGAAATCATTTCAGCTGGGTTTTTGAAGACAGAAGTCCAAATAAGTTAATGTTTCAAAGCAACTCTTTCCCTGAGCACACAGGACTTGGGGAAACGGCCGCAGGATCAGAATTTGCAGCAGTATCCGCAGCCTTTGTTACGGCAGCAGTTGCAGCAGTATCTGCACAGAGACAGATGACTCTGACGCTTCACCCTGAACAGGGATGGAGATTTGGATTAGTTTCCGTGAGATGCTCGTTCTCCTGTGGCGTTTCAGTTTCTTCAGTCTGCTGATGAAGCACAGAAGGTCATGTTGTATGTGTTTCACCAGGGGAGCGTGTGGAGATGTTTAACATGACGCTCACCTGTGTGAAGGGAACGGCCTCGGTCTGGAGCAGGCAGACGCACGCCACGACCACCGCGGCAGCGAGAGCCACTCGTGTCAGCTTCATCTTCACTTGTGTTCTGATGTAGAGGATGATATCTGCTGAAGAGGTTCCTCGGTTCTTCTGCTCATGACG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU171682 False 543 lncRNA 0.37 2 25777832 25778404
TU171683 True 726 lncRNA 0.47 2 25776736 25778404

Neighbor

gene id symbol gene type direction distance location
etfb etfb,LOC107688199,LOC107707641,LOC107728982,LOC107671471,LOC107552519 coding downstream 24636 25746565 ~ 25752100 (-)
vsig10l vsig10l,LOC107707630 coding downstream 31692 25735523 ~ 25745044 (-)
lim2.5 lim2.5,lim2,LOC102215845,LOC100699404 coding downstream 43154 25731193 ~ 25733582 (-)
nek10 nek10,LOC107728980,LOC107552505 coding downstream 48071 25712911 ~ 25728665 (-)
znf385d LOC107671428,LOC107592108,LOC107688204,LOC107716984,LOC107569797 coding downstream 149637 25568531 ~ 25627099 (-)
LOC122360054 LOC107707625,LOC107688253,LOC107568862,LOC107733023,LOC107671396,LOC107552509,LOC100004033 coding upstream 306370 26084774 ~ 26088904 (-)
si:ch73-90p23.1 si:ch73-90p23.1,LOC107707631,LOC107688273,LOC107568869,LOC107552515,LOC107733026,LOC107671412 coding upstream 312974 26091378 ~ 26103408 (-)
LOC122360053 LOC107688272,LOC107707632,LOC107552516,LOC107671410,LOC107733025,LOC107568861 coding upstream 325140 26103544 ~ 26107754 (-)
si:dkeyp-97a10.3 LOC107733029,LOC107552521,LOC107671397,LOC107568860 coding upstream 329465 26107869 ~ 26120740 (-)
LOC122361084 LOC103367052,LOC103477771,LOC100706402,LOC102311978,LOC103139281,LOC101466533,LOC107379323,LOC107552522,LOC567622,LOC102231083,LOC108413244 coding upstream 355844 26134248 ~ 26173373 (-)
G116247 LOC107568872,LOC107688200,LOC107728981,LOC107592106,LOC107707640,LOC107671434 non-coding downstream 69940 25704700 ~ 25706796 (-)
G116264 NA non-coding downstream 81379 25694109 ~ 25695357 (-)
G116237 NA non-coding downstream 218718 25211393 ~ 25558018 (-)
G116242 NA non-coding downstream 598129 25177452 ~ 25178607 (-)
G116212 LOC107588526,LOC107755659,LOC107700712,LOC107704880,LOC107705924,LOC108433590,LOC103032252 non-coding downstream 694140 25079267 ~ 25082596 (-)
G116351 NA non-coding upstream 242121 26020525 ~ 26073006 (-)
G116350 NA non-coding upstream 283887 26062291 ~ 26069534 (-)
G116359 NA non-coding upstream 292756 26071160 ~ 26128626 (-)
G116368 NA non-coding upstream 326613 26105017 ~ 26282857 (-)
G116360 NA non-coding upstream 351876 26130280 ~ 26130806 (-)
LOC122361130 LOC107568872,LOC107728981,LOC107671434,LOC107592106,LOC107707640,LOC107688200 other downstream 66050 25664719 ~ 25710686 (-)
serinc2l serinc2l,LOC107587884,LOC107704843,LOC107732828,LOC107755451,LOC107597105 other downstream 1303371 24414226 ~ 24473365 (-)
LOC122359997 LOC107732827,LOC107704842,LOC107587847,LOC107700682,LOC107756122,LOC107597135 other downstream 1407170 24364640 ~ 24369566 (-)
phactr4b phactr4b,LOC107587745,LOC107597106,LOC107700669 other downstream 1436948 24317482 ~ 24339788 (-)
mchr2a mchr2,si:dkey-165n16.5,LOC107587893,LOC107597140,LOC107700674,LOC107716821,LOC107711724 other downstream 2101391 23668065 ~ 23675345 (-)
G116604 slc9a1,LOC107688187,LOC107564092 other upstream 601268 26379672 ~ 26384187 (-)
LOC122360302 man1c1,LOC107713850,LOC107564091,LOC107665908,LOC107729795,LOC108426368,LOC101882461,LOC107601975 other upstream 643314 26421718 ~ 26507052 (-)
G116654 myom3,LOC107659064,LOC107729819 other upstream 1028716 26807120 ~ 26809146 (-)
G116632 fabp10a,LOC107677662,LOC103026354 other upstream 1031913 26810317 ~ 26812974 (-)
G116668 NA other upstream 1095994 26874398 ~ 26876610 (-)

Expression


Co-expression Network