G116368


Basic Information

Item Value
gene id G116368
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056714.1
NCBI id CM032083.1
chromosome length 28146790
location 26105017 ~ 26282857 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU171824
tttactttttttttttttttttctggacagtttatttatttttttattcaaaaccatttaaaacaaagcattttaagAGTCACTGAATATCCTTCCACGGTTGCAGAACATAActtaataaaacaagacaagcTCAGAACACACAGCTCTAAAGAAATCGAAGGTTCACATTGTAAATTTATTCAACATTGTTgccttatttactttttttttttttttctcctcgtGACAATTTCATTgtaacttcttttaaaaaaataaaaacgaaaacacAGTATTTGTACGTTTAAATGCTAACGACATGGTGAAAAGCCTTCCGAAAACGTTTTACAAACACTCTTAAGCTGCCTTTTGAGAATGTTTGGTGTTTAAAATCCAAAGATAaaccaagaaagaaagaaagatagatagagcagtaaaacaaaactttaGGACAATgcacttgctttttttttttttttttttttttgccaacagATTTAGCGAAGGCAAACCGTTTTGGCAAAGATACAGACGACTTGATTCAAAAAAATGGGATACAAATggatatgaatgaaatatagtAACTCCTGTCAAATCAATCAGTACATAAAAAGCAAGTCAACAAGTCAACTATAAATGTTATTCTTAATATAAAACTTGGtaaaaaatagttatttcaaACTGTACAGTCACCAAGTACATAGAAGGATCAGACACTCGTTAGCTTCTCATTTGGCGTCGCCAGCAGCGTCAACCTTCTG
>TU171825
tttactttttttttttttttttctggacagtttatttatttttttattcaaaaccatttaaaacaaagcattttaagAGTCACTGAATATCCTTCCACGGTTGCAGAACATAActtaataaaacaagacaagcTCAGAACACACAGCTCTAAAGAAATCGAAGGTTCACATTGTAAATTTATTCAACATTGTTgccttatttactttttttttttttttctcctcgtGACAATTTCATTgtaacttcttttaaaaaaataaaaacgaaaacacAGTATTTGTACGTTTAAATGCTAACGACATGGTGAAAAGCCTTCCGAAAACGTTTTACAAACACTCTTAAGCTGCCTTTTGAGAATGTTTGGTGTTTAAAATCCAAAGATAaaccaagaaagaaagaaagatagatagagcagtaaaacaaaactttaGGACAATgcacttgcttttttttttttttttttttttttttttttttttttttttttttttttttttttttttttttttttttttttc
>TU171826
tttttactttttttatttttttttttctggacagtttatttatttttttattcaaaaccatttaaaacaaagcattttaagAGTCACTGAATATCCTTCCACGGTTGCAGAACATAActtaataaaacaagacaagcTCAGAACACACAGCTCTAAAGAAATCGAAGGTTCACATTGTAAATTTATTCAACATTGTTgccttatttactttttttttttttttctcctcgtGACAATTTCATTgtaacttcttttaaaaaaataaaaacgaaaacacAGTATTTGTACGTTTAAATGCTAACGACATGGTGAAAAGCCTTCCGAAAACGTTTTACAAACACTCTTAAGCTGCCTTTTGAGAATGTTTGGTGTTTAAAATCCAAAGATAaaccaagaaagaaagaaagatagatagagcagtaaaacaaaactttaGGACAATgcacttgcttttttttttttttttttttttttttttttttttttttttttttttttttttttttttttttttttttttttttttttc
>TU171827
tttactttttttttttttttttctggacagtttatttatttttttattcaaaaccatttaaaacaaagcattttaagAGTCACTGAATATCCTTCCACGGTTGCAGAACATAActtaataaaacaagacaagcTCAGAACACACAGCTCTAAAGAAATCGAAGGTTCACATTGTAAATTTATTCAACATTGTTgccttatttactttttttttttttttctcctcgtGACAATTTCATTgtaacttcttttaaaaaaataaaaacgaaaacacAGTATTTGTACGTTTAAATGCTAACGACATGGTGAAAAGCCTTCCGAAAACGTTTTACAAACACTCTTAAGCTGCCTTTTGAGAATGTTTGGTGTTTAAAATCCAAAGATAaaccaagaaagaaagaaagatagatagagcagtaaaacaaaactttaGGACAATgcacttgctttttttttttttttttttttttttttttttttttttttttttttttttttttttttttttttttttttttttttttc
>TU171828
aattttttttttttttttttacagctttttttttttctggacagtttatttatttttttattcaaaaccatttaaaacaaagcattttaagAGTCACTGAATATCCTTCCACGGTTGCAGAACATAActtaataaaacaagacaagcTCAGAACACACAGCTCTAAAGAAATCGAAGGTTCACATTGTAAATTTATTCAACATTGTTgccttatttactttttttttttttttctcctcgtGACAATTTCATTgtaacttcttttaaaaaaataaaaacgaaaacacAGTATTTGTACGTTTAAATGCTAACGACATGGTGAAAAGCCTTCCGAAAACGTTTTACAAACACTCTTAAGCTGCCTTTTGAGAATGTTTGGTGTTTAAAATCCAAAGATAaaccaagaaagaaagaaagatagatagagcagtaaaacaaaactttaGGACAATgcacttgcttttttttttttttttttttttttttttttttttttttttttttttttttttttttttttttttttttttttttttc
>TU171830
tttactttttttttttttttttctggacagtttatttatttttttattcaaaaccatttaaaacaaagcattttaagAGTCACTGAATATCCTTCCACGGTTGCAGAACATAActtaataaaacaagacaagcTCAGAACACACAGCTCTAAAGAAATCGAAGGTTCACATTGTAAATTTATTCAACATTGTTgccttatttactttttttttttttttttttttttttttttttttttttttttttttttttttttttttttttttttttc

Function

NR:

description
PREDICTED: alanine aminotransferase 2-like isoform X2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU171824 True 743 lncRNA 0.31 2 26215048 26230073
TU171825 False 519 lncRNA 0.25 4 26105017 26230073
TU171826 False 529 lncRNA 0.25 4 26105017 26280057
TU171827 False 524 lncRNA 0.25 4 26105017 26230073
TU171828 False 537 lncRNA 0.25 4 26105017 26282857
TU171830 False 272 lncRNA 0.21 4 26105017 26230073

Neighbor

gene id symbol gene type direction distance location
si:ch73-90p23.1 si:ch73-90p23.1,LOC107707631,LOC107688273,LOC107568869,LOC107552515,LOC107733026,LOC107671412 coding downstream 1609 26091378 ~ 26103408 (-)
LOC122360054 LOC107707625,LOC107688253,LOC107568862,LOC107733023,LOC107671396,LOC107552509,LOC100004033 coding downstream 16113 26084774 ~ 26088904 (-)
etfb etfb,LOC107688199,LOC107707641,LOC107728982,LOC107671471,LOC107552519 coding downstream 352917 25746565 ~ 25752100 (-)
vsig10l vsig10l,LOC107707630 coding downstream 359973 25735523 ~ 25745044 (-)
lim2.5 lim2.5,lim2,LOC102215845,LOC100699404 coding downstream 371435 25731193 ~ 25733582 (-)
fam110d si:ch211-107n13.1,LOC107688188,LOC107707635,LOC107726719,LOC107564093,LOC107552531,LOC107671482 coding upstream 16660 26299517 ~ 26314845 (-)
ubr5 ubr5,LOC107677650,LOC107659085 coding upstream 539300 26822157 ~ 26868971 (-)
LOC122360494 LOC107677651,LOC107565755,LOC107729815,LOC107601969 coding upstream 595814 26878671 ~ 26888899 (-)
LOC122361111 atp6v1c1a,atp6v1c1,LOC107601989,LOC107729816,LOC107659089,LOC107565754,LOC107724997 coding upstream 674784 26957641 ~ 26969940 (-)
LOC122361113 NA coding upstream 792647 27075504 ~ 27078615 (-)
G116351 NA non-coding downstream 32011 26020525 ~ 26073006 (-)
G116350 NA non-coding downstream 35483 26062291 ~ 26069534 (-)
G116282 NA non-coding downstream 326613 25776736 ~ 25778404 (-)
G116247 LOC107568872,LOC107688200,LOC107728981,LOC107592106,LOC107707640,LOC107671434 non-coding downstream 398221 25704700 ~ 25706796 (-)
G116264 NA non-coding downstream 409660 25694109 ~ 25695357 (-)
G116611 NA non-coding upstream 102941 26385798 ~ 26386007 (-)
G116633 NA non-coding upstream 337433 26620290 ~ 26678901 (-)
G116638 NA non-coding upstream 390067 26672924 ~ 26673379 (-)
G116647 NA non-coding upstream 456248 26739105 ~ 26739861 (-)
G116648 NA non-coding upstream 458719 26741576 ~ 26743789 (-)
LOC122361130 LOC107568872,LOC107728981,LOC107671434,LOC107592106,LOC107707640,LOC107688200 other downstream 394331 25664719 ~ 25710686 (-)
serinc2l serinc2l,LOC107587884,LOC107704843,LOC107732828,LOC107755451,LOC107597105 other downstream 1631652 24414226 ~ 24473365 (-)
LOC122359997 LOC107732827,LOC107704842,LOC107587847,LOC107700682,LOC107756122,LOC107597135 other downstream 1735451 24364640 ~ 24369566 (-)
phactr4b phactr4b,LOC107587745,LOC107597106,LOC107700669 other downstream 1765229 24317482 ~ 24339788 (-)
mchr2a mchr2,si:dkey-165n16.5,LOC107587893,LOC107597140,LOC107700674,LOC107716821,LOC107711724 other downstream 2429672 23668065 ~ 23675345 (-)
G116604 slc9a1,LOC107688187,LOC107564092 other upstream 96815 26379672 ~ 26384187 (-)
LOC122360302 man1c1,LOC107713850,LOC107564091,LOC107665908,LOC107729795,LOC108426368,LOC101882461,LOC107601975 other upstream 138861 26421718 ~ 26507052 (-)
G116654 myom3,LOC107659064,LOC107729819 other upstream 524263 26807120 ~ 26809146 (-)
G116632 fabp10a,LOC107677662,LOC103026354 other upstream 527460 26810317 ~ 26812974 (-)
G116668 NA other upstream 591541 26874398 ~ 26876610 (-)

Expression


Co-expression Network