G9815



Basic Information


Item Value
gene id G9815
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information


Item Value
chromosome id CI01000000
NCBI id null
chromosome length 19091038
location 14884852 ~ 14949217 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence


>TU10826
GCCACAGAAGAGAAGATATGGTAACACTTTAGTATAGGGAACACATATTCACTATTAACTACGACTTTTCCCTCAATAAACTCCTAATTTACTGCTTATTAATAGTTAGTAAGGTAGTTGTTAGGTTTAGGTATTGGGTAGGATTAAAAATGTAGAATAAGGTCATGCAGATTAAGGCATTAATATGTGCTTTATAAGTACTAATAAACAGCCAATATTCTAGTAATATGTATGCTAATAAGCAACTAGTTAAAAGTCCCTAAAATAAAGTGTTACCGAAGATATTGTTGAATAAAGTCATTATTTTTGTTTTGTTTTTGTGCACATAAAGTATTCTCATTTCTTCCCATTTTAAAATCTTCCCCGTCTACTGACACTTATGACATCCGCTTCAAACATTGCAATGCTAATGATAGCTTTTGTTAACTCTACAATAAGTAAATCCACTTCACCAGCTGATTACTCATCAACAGCGATGCCGTAGAAATATACAGAGCTACCGCAAAAACAGAAGTTTTTTTTTGGCTGCTCGCTTGTGTCTCTGGCGCATGAAGTCTATATTTGCAGCTGCCGTTTGGTAGTGATGTGGTATTTATGCATTTATGCATACACATTAGCGCACATGATAAACAGTCCTTTTTAAAGTCATTTAGTACCCTTTATCTTTGAATCAGAGCTTATTAAATACAAGACAAACAAGGCACCAGGGATATATTTAGGCCTTTGCTTGATGTCACCTTGAACATATTTGGAGAACAAGTTGTTCTAACTCCGAATATGACTCAAGATCAGCACTAAGACAATCAGGCACAAGGGATATTCAAATGTGAGAGTCCTTTTTAATGACTCTGTCAGGATGGTTGTCCTTGCTGTTTGAGAAAAGAAAGCAGGTGACAAGGCATTGTTACTTCATTAGCTGAATCAGTCTTGTTGAACCCCGGGGGGAGTGCATGCGTTGCACGTCTCTAACCTGAGCTGAACCGCACATAAAAAAAAAACTGTGCTGCTGCTTTGAGCACACAAAGAATGTAGCTCACACCTCAGCTGAGTGAGTTAGTGTGGAAGAGGGCGTATAATTTAAAGCGTTTAAATACAGCTTTCTGGAGTAAATCCCCAGCTATATATATATTAGAGTTGAACAGCCTAAAGGTGATTTAAAACTGTCAAACCAATCCAAAATAAAGGTTTAACTGCGTTCTGTGTGATTTTCTACTTAATTATTAAAATCTAGATCAATTATTCAGGACTGACTGTTGTAAGAATGTTCATTGAACAGCTTGTCAATCATCTGGTGTCTCTTGAAGGCCAGGCCTGCTGTGTCATGTTTATTTGAATGGCACAGTAAATTATTGAGGATCAAATGAAAGAGGTGTGATAATGTTAAGGCAGATTTCAGGGCCACTGCAAATTAAATGTCTTAGATTTGGTTTGACCCAAAATCCTTCAGCTATGAACTTCGTTCTTCCACTGTACTGTATGTATAAATGAACTGGCACAAACAGAAAATGTGCATCAAAATGCAACATCTAGAGTTTGATTTTCAAGCATCCAGTTAAATTATGCTATATTGCTCTTCACTCCTGTAGTCATGATAAAGTGCATAGTATATTCATTTCAGTTCTGTTGACACCTTAAAAAAGGACCATTTAAACACCTTTACAGTTAAAATTATGAATATTTTTATTGAATGGTTTGAATGGTTCATGAAGCAGTGTTTTGAAATCGCCCATCACTAGATATTGTTGAATAAAGTCGTTGGCGCACAAAAAGTATTCTCGTCGCTTCATAACATTTAGGTTGAACCAGTGCAGTCACATGAACTGTTTTAAATATGTCTTTAGTAGATTTCTGGGCATTTAAAAGTGTAAATTAACTGTCAATGGACGCCTCACTGAGCCATCGGATTTGATCAAAAGTATCTTAATTTGTGTTCTGAAGATGAACGAAGGTCTTACGGGTGTGGAACGACATGAGGGTGAGTAATTAATGACAG

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU10826 True 1993 lncRNA 0.42 2 14884852 14949217

Neighbor


gene id symbol gene type direction distance location
CI01000000_14878575_14879403 PIN4.L, PIN4 coding downstream 5449 14878451 ~ 14879403 (-)
CI01000000_14860321_14870819 ACSL4, ACSL4A coding downstream 14033 14860253 ~ 14870819 (-)
CI01000000_14854324_14856747 NA coding downstream 28105 14853855 ~ 14856747 (-)
CI01000000_14841466_14845039 NA coding downstream 39143 14841458 ~ 14845709 (-)
CI01000000_14817014_14832017 STAG2, STAG2B coding downstream 52819 14816685 ~ 14832033 (-)
CI01000000_14975127_14983931 NA coding upstream 25750 14974967 ~ 14993224 (-)
CI01000000_14999116_15059379 NA coding upstream 49706 14998923 ~ 15059770 (-)
CI01000000_15335751_15402655 NA coding upstream 386490 15335707 ~ 15404359 (-)
CI01000000_15428786_15450469 NA coding upstream 479191 15428408 ~ 15451049 (-)
CI01000000_15794752_15824681 KLHL4 coding upstream 845448 15794665 ~ 15825004 (-)
G9821 NA non-coding downstream 109381 14775259 ~ 14775471 (-)
G9794 NA non-coding downstream 184920 14699711 ~ 14699932 (-)
CI01000000_14195942_14196532 NA non-coding downstream 687343 14195808 ~ 14196534 (-)
G9647 NA non-coding downstream 747451 14131011 ~ 14137401 (-)
G9136 NA non-coding downstream 849277 14035245 ~ 14035575 (-)
G9885 NA non-coding upstream 216214 15165431 ~ 15166293 (-)
G9964 NA non-coding upstream 310096 15259313 ~ 15259543 (-)
G9968 NA non-coding upstream 319791 15269008 ~ 15269436 (-)
G9972 NA non-coding upstream 330551 15279768 ~ 15280101 (-)
CI01000000_14200000_14436182 TENM2 other downstream 386258 14200000 ~ 14436253 (-)
G9602 NA other downstream 538318 14341002 ~ 14346534 (-)
G9036 NA other downstream 1157762 13726800 ~ 13727090 (-)
G8699 NA other downstream 1573423 13272585 ~ 13311429 (-)
G8125 NA other downstream 3843943 11040269 ~ 11040909 (-)
G10672 NA other upstream 1277070 16226287 ~ 16231126 (-)
CI01000000_16354158_16360016 NA other upstream 1413291 16353959 ~ 16360213 (-)
G11107 NA other upstream 1717901 16667118 ~ 16667947 (-)

Expression



Co-expression Network