G116711


Basic Information

Item Value
gene id G116711
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056714.1
NCBI id CM032083.1
chromosome length 28146790
location 27240615 ~ 27241091 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU172405
atgtgCAGGCAGTGTAGAGCTAACAGGAAGTGGGAGAAAGAGAAcgatcatttttattagtttttttttccttctttttttttttttaagtccacGTGAAACCAAAACTGACTATATTTATTTCGTTAGCTCacactgctattttttttatttattttcaatttatccGTGCAAGTCAatccaaaaaaactaattattttgtctttgtaaCCTTTAATCCAAATCTTAAAATGCTCCTCCCCCTGATGATGTCAGGTTGACGGCTTGGGCATGAGCGTGACAtcattaaccacgcccctccGTCGGTCACGGAAACGCCCACTTTACGACATTTAATCCATTCCAAGTAAAAAAGAGCAACAGGAAAcgccctctttttctctcagaagtatgtcacaatacagaaataaaattggtcacaaactaaaatttaatcatgattaatcgcatccaaaataaaaggttttttttttttta

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU172405 True 477 lncRNA 0.35 1 27240615 27241091

Neighbor

gene id symbol gene type direction distance location
LOC122361070 tppp,LOC107659066,LOC107677661,LOC107565752,LOC107754442,LOC107601987 coding downstream 12047 27214090 ~ 27228568 (-)
spire1b spire1,LOC107565753,LOC107677663,LOC107601988,LOC107659090 coding downstream 36322 27180637 ~ 27204293 (-)
LOC122361113 NA coding downstream 162000 27075504 ~ 27078615 (-)
LOC122361111 atp6v1c1a,atp6v1c1,LOC107601989,LOC107729816,LOC107659089,LOC107565754,LOC107724997 coding downstream 270675 26957641 ~ 26969940 (-)
LOC122360494 LOC107677651,LOC107565755,LOC107729815,LOC107601969 coding downstream 351716 26878671 ~ 26888899 (-)
brd9 brd9,LOC107754443,LOC107659091 coding upstream 1791 27242882 ~ 27258010 (-)
si:ch211-269k10.4 NA coding upstream 134810 27375901 ~ 27381789 (-)
LOC122360076 slc6a20,LOC106605517,LOC106579373 coding upstream 297302 27538393 ~ 27558972 (-)
LOC122360683 rab11al,rab25,LOC107688222,LOC107756900,LOC107671462,LOC107726679,LOC107592127 coding upstream 372682 27613773 ~ 27621631 (-)
LOC122359999 lamtor2,LOC107688283,LOC107592476 coding upstream 387466 27628557 ~ 27630274 (-)
G116710 NA non-coding downstream 476 27238986 ~ 27240139 (-)
G116696 NA non-coding downstream 27002 27153346 ~ 27213613 (-)
G116700 NA non-coding downstream 83125 27155095 ~ 27157490 (-)
G116666 NA non-coding downstream 366255 26817032 ~ 26874360 (-)
G116670 srsf10a,srsf10b,LOC107724996,LOC107677658,LOC107729809,LOC107659087 non-coding downstream 421767 26816120 ~ 26818848 (-)
G116721 NA non-coding upstream 58403 27299494 ~ 27307565 (-)
G116723 NA non-coding upstream 66685 27307776 ~ 27308221 (-)
G116730 NA non-coding upstream 126741 27367832 ~ 27371377 (-)
G116748 NA non-coding upstream 131438 27372529 ~ 27375167 (-)
G116733 NA non-coding upstream 137469 27378560 ~ 27489679 (-)
LOC122360878 NA other downstream 242256 26993974 ~ 26998359 (-)
G116677 NA other downstream 284781 26954220 ~ 26955834 (-)
G116668 NA other downstream 364005 26874398 ~ 26876610 (-)
G116632 fabp10a,LOC107677662,LOC103026354 other downstream 427641 26810317 ~ 26812974 (-)
G116654 myom3,LOC107659064,LOC107729819 other downstream 431469 26807120 ~ 26809146 (-)
G116745 plekhg4b,LOC107569053,LOC107659069,LOC107601962,LOC108426379,LOC107729806 other upstream 117616 27358707 ~ 27360829 (-)
LOC122360079 NA other upstream 279099 27520190 ~ 27579866 (-)
LOC122359885 rab25b,LOC107756889,LOC107592474,LOC107688282,LOC107671436,LOC107592134 other upstream 381538 27622629 ~ 27627660 (-)
G116836 rpz,LOC107688232,LOC107592467,LOC107728474,LOC107726667,LOC107671398 other upstream 466625 27707716 ~ 27804770 (-)
G116868 NA other upstream 722397 27963488 ~ 27964958 (-)

Expression


Co-expression Network