G116733


Basic Information

Item Value
gene id G116733
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056714.1
NCBI id CM032083.1
chromosome length 28146790
location 27378560 ~ 27489679 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU172433
ACAGCCAATAGCGTGTCGTTTGCATCCGCAGTCTGGTCACTCACCAGAGAAACCAGGTTCCACGGGTGCTTCCTACGAAACTCTCCGCAGCACAGGATCACTAGGTAGGGCACGAGGAAGGCCGCGTAGCCGGCCAAGTACGTCAAGGGGTTCTGCTTCACGAAGCGCTTGACGTGAGGCTCGAACGTGAAGACGGCCACGAAGCCGCAGGTGATGGCCAGCTGAACACTCAAGACCGAGAAAACCTggaaaacacacataaaaccgCCTCAGAACTCACTATAATTCATTTAGAAAATACACGCGTCagttatgtattatatatttatttaaataaatatatacatttaaaaatagctacatttatttttaaaaatgggctaaaaacgaataaaaatggCACTGACATACAGCAAAGTTGTAAAAGTTTTAACATCCCTTTTTAGCaaattaaccaaaaataaaactcaaataaaaataaataatagctacgcaggcataaaataaaagtgcctaaaaatatgaaaaaaaatgacattttgtaaagaattttttaaatatcatcacGTGTGGATCTCATCTGagagcaataaaataaaaataccaataaaattaattaaaataaaaacgtgccggggttcacgtattgaacctgtgttttagcgccgctcagtggacatttctctgaAACGGGGCTGAGACGTGCAGAAACGAGCAGAAACGAGCAGAAAAAACTGTGTTGCACAGAAAAAggcacatatttttatgagaccaggttgttcTCATACGCCATCTCTGACTGAACCTGCGTGCCTGGACCTGAACGTTTCTgattacataatgtgtgtgtgtgtgtgtgtgtgtgtgtgtgagagtgtgtgtgtgtgtgtgtgtgtgtgtgagagtgtgtgtgtgtgtgtgtgtg
>TU172434
ACAGCCAATAGCGTGTCGTTTGCATCCGCAGTCTGGTCACTCACCAGAGAAACCAGGTTCCACGGGTGCTTCCTACGAAACTCTCCGCAGCACAGGATCACTAGGTAGGGCACGAGGAAGGCCGCGTAGCCGGCCAAGTACGTCAAGGGGTTCTGCTTCACGAAGCGCTTGACGTGAGGCTCGAACGTGAAGACGGCCACGAAGCCGCAGGTGATGGCCAGCTGAACACTCAAGACCGAGAAAACCTggaaaacacacataaaaccgCCTCAGAACTCACTATAATTCATTTAGAAAATACACGCGTCagttatgtattatatatttatttaaataaatatatacatttaaaaatagctacatttatttttaaaaatgggctaaaaacgaataaaaatggCACTGACATACAGCAAAGTTGTAAAAGTTTTAACATCCCTTTTTAGCaaattaaccaaaaataaaactcaaataaaaataaataatagctacgcaggcataaaataaaagtgcctaaaaatatgaaaaaaaatgacattttgtaaagaattttttaaatatcatcacGTGTGGATCTCATCTGagagcaataaaataaaaataccaataaaattaattaaaataaaaacgtgccggggttcacgtattgaacctgtgttttagcgccgctcagtggacatttctctgaAACGGGGCTGAGACGTGCAGAAACGAGCAGAAACGAGCAGAAAAAACTGTGTTGCACAGAAAAAggcacatatttttatgagaccaggttgttcTCATACGCCATCTCTGACTGAACCTGCGTGCCTGGACCTGAACGTTTCTgattacataatgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgagtgtgtgagtgtgtgtgtgt
>TU172435
ACAGCCAATAGCGTGTCGTTTGCATCCGCAGTCTGGTCACTCACCAGAGAAACCAGGTTCCACGGGTGCTTCCTACGAAACTCTCCGCAGCACAGGATCACTAGGTAGGGCACGAGGAAGGCCGCGTAGCCGGCCAAGTACGTCAAGGGGTTCTGCTTCACGAAGCGCTTGACGTGAGGCTCGAACGTGAAGACGGCCACGAAGCCGCAGGTGATGGCCAGCTGAACACTCAAGACCGAGAAAACCTggaaaacacacataaaaccgCCTCAGAACTCACTATAATTCATTTAGAAAATACACGCGTCagttatgtattatatatttatttaaataaatatatacatttaaaaatagctacatttatttttaaaaatgggctaaaaacgaataaaaatggCACTGACATACAGCAAAGTTGTAAAAGTTTTAACATCCCTTTTTAGCaaattaaccaaaaataaaactcaaataaaaataaataatagctacgcaggcataaaataaaagtgcctaaaaatatgaaaaaaaatgacattttgtaaagaattttttaaatatcatcacGTGTGGATCTCATCTGagagcaataaaataaaaataccaataaaattaattaaaataaaaacgtgccggggttcacgtattgaacctgtgttttagcgccgctcagtggacatttctctgaAACGGGGCTGAGACGTGCAGAAACGAGCAGAAACGAGCAGAAAAAACTGTGTTGCACAGAAAAAggcacatatttttatgagaccaggttgttcTCATACGCCATCTCTGACTGAACCTGCGTGCCTGGACCTGAACGTTTCTgattacataatgtgtgtgtgtgtgtgtgtgtgtgagagtgagtgagtgtgtgtgtgtgtgtgagtgagtgtgtgtgtgtgtgagtgagtgtgtgtgtgtgtgagtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgagtgagtgtgtgtgtgtgtgagtgtgtgagtgtgtgtgtgt

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU172433 False 925 lncRNA 0.41 3 27378560 27489679
TU172434 False 898 lncRNA 0.40 3 27480300 27489679
TU172435 True 1014 lncRNA 0.42 3 27480300 27489679

Neighbor

gene id symbol gene type direction distance location
brd9 brd9,LOC107754443,LOC107659091 coding downstream 120550 27242882 ~ 27258010 (-)
zdhhc11 NA coding downstream 135821 27229786 ~ 27242739 (-)
LOC122361070 tppp,LOC107659066,LOC107677661,LOC107565752,LOC107754442,LOC107601987 coding downstream 149992 27214090 ~ 27228568 (-)
spire1b spire1,LOC107565753,LOC107677663,LOC107601988,LOC107659090 coding downstream 174267 27180637 ~ 27204293 (-)
LOC122361113 NA coding downstream 299945 27075504 ~ 27078615 (-)
LOC122360076 slc6a20,LOC106605517,LOC106579373 coding upstream 48714 27538393 ~ 27558972 (-)
LOC122360683 rab11al,rab25,LOC107688222,LOC107756900,LOC107671462,LOC107726679,LOC107592127 coding upstream 124094 27613773 ~ 27621631 (-)
LOC122359999 lamtor2,LOC107688283,LOC107592476 coding upstream 138878 27628557 ~ 27630274 (-)
LOC122360733 ubqln4,LOC107756885,LOC107726678 coding upstream 142087 27631766 ~ 27637531 (-)
LOC122360378 rpz4,LOC107688231,LOC107592460,LOC107756901,LOC107671422,LOC107726665,LOC107592129 coding upstream 195588 27685267 ~ 27690120 (-)
G116748 NA non-coding downstream 3393 27372529 ~ 27375167 (-)
G116730 NA non-coding downstream 7183 27367832 ~ 27371377 (-)
G116723 NA non-coding downstream 70339 27307776 ~ 27308221 (-)
G116721 NA non-coding downstream 70995 27299494 ~ 27307565 (-)
G116711 NA non-coding downstream 137469 27240615 ~ 27241091 (-)
LOC122360078 NA non-coding upstream 94975 27584654 ~ 27592026 (-)
G116812 NA non-coding upstream 118533 27608212 ~ 27608965 (-)
G116814 NA non-coding upstream 122389 27612068 ~ 27612500 (-)
G116833 NA non-coding upstream 186309 27675988 ~ 27677259 (-)
G116834 rpz3,LOC107688230,LOC107592462,LOC107671478,LOC107592463,LOC107728473 non-coding upstream 211447 27701126 ~ 27704934 (-)
G116745 plekhg4b,LOC107569053,LOC107659069,LOC107601962,LOC108426379,LOC107729806 other downstream 17731 27358707 ~ 27360829 (-)
LOC122360878 NA other downstream 380201 26993974 ~ 26998359 (-)
G116677 NA other downstream 422726 26954220 ~ 26955834 (-)
G116668 NA other downstream 501950 26874398 ~ 26876610 (-)
G116632 fabp10a,LOC107677662,LOC103026354 other downstream 565586 26810317 ~ 26812974 (-)
LOC122360079 NA other upstream 30511 27520190 ~ 27579866 (-)
LOC122359885 rab25b,LOC107756889,LOC107592474,LOC107688282,LOC107671436,LOC107592134 other upstream 132950 27622629 ~ 27627660 (-)
G116836 rpz,LOC107688232,LOC107592467,LOC107728474,LOC107726667,LOC107671398 other upstream 218037 27707716 ~ 27804770 (-)
G116868 NA other upstream 473809 27963488 ~ 27964958 (-)

Expression


Co-expression Network