sgk2b (sgk2b,LOC107687822,LOC107595908,LOC107706345)


Basic Information

Item Value
gene id sgk2b
gene name sgk2b,LOC107687822,LOC107595908,LOC107706345
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056714.1
NCBI id CM032083.1
chromosome length 28146790
location 16571366 ~ 16575436 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043260035.1
CCCCCATGAGGCAGCGCTCAACCAGACCTGACCGGTAAGATAGCAGACTACCGACGGACTCACAAGTCACAGCTGTCAACCCGGCTGTCCTCGTCGAAAACATGGTGAAAAAGGCTAAAAGTCCCGTGACTTACGCAAAAATGAAGGGAATCGTTTCATATTTTACAGcTTTAATTAAGGACAAGAAGCTCCGATCCAGCCACCCTATCTATCGACAGATGGATTTCTTGCGACCTGAGGGTAGTCTCTCTGAAGATGATGGAGCTGCAGCTGTTTGTTATAGTAATCCACAATCAGATGAGCCAGAGTCTCGGGTATCTGCAGCTGATTTTGACTACTTGAAGGTGATTGGAACGGGCAGCTTTGGCAAGGTTTTCTTGGCCACACACAGGGAAAATGGCAGATATTATGCAGTCAAAGTTCTACAGAAACACATCATCTTAACGAGGAAGGAGGAAAGAAATGTCATGTGTGAACACAGAGTGTTGTTAAAGACTCTTAATCATCCATTCCTGGTGAAGCTGCACTTCAGTTTTCAGACTAAGGAGAGACTCTATCTAGTGCTGGACTATGCATGTGGAGGAGAGCTCTTTTACCATTTGCAGAGAGAGGGGGTGTTTGTAGAGCCCCGAGCCAGATTTTATGCTGCTGAGATGGCCTGTGCTTTAGGATACTTACACTCCCTGAAGATTGTCTATAGGGACCTGAAACCAGAAAACATTTTGCTGGATTCTGCAGGTCATGTGGTTCTGACCGACTTTGGCTTGTGTAAGGAGGGAATGAGTGGACGTGACACCACCAGAACCTTTTGTGGAACGCCAGAGTACTTAGCACCTGAGGTTCTCCTGCAGAAGGAGTATGACAGGACTGTGGACTGGTGGGGTTTGGGAGCTGTTTTTCATGAAATGCTCTATGGCCTGCCACCTTTCTACAATGCAGATCGTCTTGAGATGctcagaaatattatttatcagcCATTGGCATTAAAACCCGGAGTGTCTAGTGCAGCCAGAGATCTGCTGAAGAGACTGCTAAACAGGGACAGGGCCAAGAGACTAGGAGCAAAACGTGACCTGACTGAGCTGCAGTCTCATCCATTCTTCTCATCGATTCACTGGGATGAACTTGTCGCAAAGCAAATTCCTCCTCCTTACGTTCCCTTATtgTCTGGCCCTGGTGACCTCACAAACATTGACCCTCGGTTTACAGAACTTCCTGTTCCACAGTCGCTAGGAGCATGTGAGGAGCATGGAGCAACTTTTCCCGGTTTCACCTACATCAATGAAAACATTCTATCACTGACTCGTGAACATTAAGACAGAATTCTGTCAGACCAATAGACATTTTGTCTGAACATGTTTCTAActatgttttaatttaagcaaACTCTGAAACAcagttcatttttatgttagcTGGACCAATGCTTTTGCACAAGACTACAAGGTTTCTATCAAATGTGACTGTGTTTTTTAACACTCGTGTTAATTCCTTTTTTAGCCCTATTTGATAAAAAAGATATTGCTGAAATACAGTAAGTGGTTTTCTGACAGTACTGTAATGAAATAAAGTGAGACTACAGGCTGCATCAGATGTTGGATTGTAAGAGTTGTGagatgaaattaatattaaatatcaatgtTACCGAAATTGTGTATAGTGTTCAGATGGTATTGGTTTTTGACGAAATTGTATTATCAGTAAAATGTCCGTTTTTGGAGgaattttttgtggaaacaataaaattattttaatcaaa

Function

symbol description
sgk2b Predicted to enable potassium channel regulator activity and protein serine/threonine kinase activity. Predicted to be involved in intracellular signal transduction and peptidyl-serine phosphorylation. Predicted to act upstream of or within protein phosphorylation. Orthologous to human SGK2 (serum/glucocorticoid regulated kinase 2).

NR:

description
PREDICTED: serine/threonine-protein kinase Sgk1-like

GO:

id name namespace
GO:0006468 protein phosphorylation biological_process
GO:0005524 ATP binding molecular_function
GO:0004674 protein serine/threonine kinase activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043260035.1 True 1759 mRNA 0.43 12 16571366 16575436

Neighbor

gene id symbol gene type direction distance location
l3mbtl1b LOC107687798,LOC107706333,LOC107723564,LOC107657713,LOC107593673 coding downstream 928 16561699 ~ 16570438 (-)
LOC122360041 LOC107687802,LOC107595942,LOC107706353 coding downstream 11332 16557546 ~ 16560034 (-)
megf8 megf8,LOC107595817,LOC107687796,LOC107593670,LOC107657710 coding downstream 31753 16514357 ~ 16539613 (-)
LOC122359884 LOC107706374,LOC107687795,LOC107595808,LOC107723391 coding downstream 57395 16508483 ~ 16513971 (-)
erfl1 erfl1,LOC107723390,LOC107596612,LOC107706551,LOC107657604,LOC107699460,LOC108431014 coding downstream 92323 16439901 ~ 16479043 (-)
rnf41l rnf41l,LOC107687809,LOC107723454,LOC107593678,LOC108443277 coding upstream 71110 16646546 ~ 16650313 (-)
pdp1 pdp1,LOC107706250,LOC107595893,LOC107687812,LOC107593682,LOC107723551 coding upstream 112779 16688215 ~ 16693128 (-)
ino80c ino80c,LOC107706244,LOC107723410,LOC107657632,LOC107596621,LOC107593731 coding upstream 121885 16697321 ~ 16698849 (-)
tmem245 LOC107687814,LOC107595951,LOC107706205,LOC107723436,LOC107657721,LOC107593683 coding upstream 208584 16784020 ~ 16799200 (-)
LOC122360322 frrs1l,LOC107595962,LOC107657722,LOC107723406,LOC107593684 coding upstream 223924 16799360 ~ 16804107 (-)
G113405 NA non-coding downstream 17508 16552608 ~ 16553858 (-)
LOC122360769 NA non-coding downstream 76627 16488118 ~ 16494739 (-)
G113325 prss59.1,LOC107595716,LOC107739933,LOC107657703,LOC107735769,LOC107699485,LOC107593705,LOC101066992,LOC108431067,LOC102234122 non-coding downstream 213743 16352270 ~ 16357623 (-)
G113280 jarid2a,LOC107593646,LOC107657689,LOC107714830,LOC107699452,LOC107595576 non-coding downstream 375470 16194029 ~ 16195896 (-)
G113300 NA non-coding downstream 378677 16190862 ~ 16192689 (-)
G113433 NA non-coding upstream 13249 16588685 ~ 16589614 (-)
G113439 epb41l4b,LOC107706320,LOC107687806,LOC107596310 non-coding upstream 31278 16606714 ~ 16607680 (-)
G113470 cdh17,LOC107595837,LOC107706528,LOC107687825 non-coding upstream 104248 16679684 ~ 16680112 (-)
G113473 NA non-coding upstream 118494 16693930 ~ 16694290 (-)
LOC122360493 NA non-coding upstream 148982 16724418 ~ 16737282 (-)
fam8a1b fam8a1,fam8a1b,LOC107715098,LOC107593650,LOC107595671,LOC107723574,LOC107657622 other downstream 331860 16232972 ~ 16239506 (-)
atxn1b atxn1b,LOC107699498,LOC107595586,LOC107723489,LOC107593649,LOC107657690,LOC107736225 other downstream 342900 16218661 ~ 16228466 (-)
G113267 LOC107699468,LOC107715083,LOC107596252 other downstream 430131 16139319 ~ 16141235 (-)
G113275 zgc:136493,LOC107699466,LOC107714862,LOC107596560 other downstream 557615 16012964 ~ 16013751 (-)
adnp2a LOC107714821,LOC107699502,LOC107723537,LOC107595567,LOC107657688 other downstream 564895 16001313 ~ 16006471 (-)
esrp1 esrp1,LOC107687807,LOC107706288,LOC107593677,LOC107657715,LOC107723447,LOC107706528,LOC107595837,LOC107687825,LOC107657630,LOC107723411,LOC107593711 other upstream 10648 16586084 ~ 16682178 (-)
onecutl onecutl,LOC107741751,LOC107663311,LOC107689849,LOC107732477 other upstream 1236934 17812370 ~ 17830977 (-)
lmna lmna,LOC107704890,LOC107598000,LOC107671682,LOC107587813,LOC107741735,LOC107723101 other upstream 1620035 18195471 ~ 18239269 (-)
slc45a4b slc45a4,LOC107704898,LOC107587808,LOC107741725,LOC107671711,LOC107552861,LOC107723109 other upstream 1781981 18357417 ~ 18367273 (-)
mroh1 mroh1,LOC107741723,LOC107724794,LOC107671755,LOC107704831 other upstream 1917190 18492626 ~ 18520287 (-)

Expression


Co-expression Network