LOC122359849 (mbp,LOC107661001,LOC107551742,LOC107697274)


Basic Information

Item Value
gene id LOC122359849
gene name mbp,LOC107661001,LOC107551742,LOC107697274
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056714.1
NCBI id CM032083.1
chromosome length 28146790
location 1496586 ~ 1510434 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043260038.1
TAACACAGCACTACCTAAAAGCAGGAAGTAGCTGCGTTAGTGGATCCTCCATCCAAACCACATGCAGccgaaacagaaaaacaaagccTACAAAATTACATTTCGGCCAGATGTGGATTTTCTGATGCACTGCTGAGGCGAGAAGCTGAAACTAGTCATCTACATATCGCGTGGACGCGTTTGGGAAAACAAGAGCATGGGGCAGCATCTTGGGAAACGTGAGCCACATACTGTTCCTAAGggGGCATCAACTGTATCTGAACCCGTCCCCACAGACTCACAAGATGAGGTATTTGGACTGGGGGAGGCGGACCTCAACCAGAACAATGGGTGCTCCAGCAAGAGTCCAGTGGTGACTGACTCCATGAACGCTGCAGTAGATCAGAGCAGCTGGAGCCATCTGAGCTCAGACGACCCTAATGCCTCAGGGCCCCGGCCCCACTTGATCCGCCTCTTTTCTCGAGATGCCCCAGGTCGCGAGGACAACACCTTCAAAGACCGCCCCTCGGAGTCTGATGAGCTGCAGACCATCCATGAGCACAGCGGAGCTGGCTCAGAGTGCGGTTCCGAGTGTGCAGAGTAGGACCTAAAGTAGATTTCCTCTTTGCCCTCTCTTTCCTCACTCCTACTTTGGAAACAAACACACCGCTGCAGAGATTAAAGCTAACACTCAGCATGGCATCTGCAAGCTCTTCGCAGTCAACATTCAGACTGGGCCGCAGTAAGAAGAATCCTACTGGTTATGGATCAGATTGGAAAGTTCtttggaggggaaaaaaagaagaagggaAAGGTGAGGATTGAGCAGGCATTCAGAGTTCTCCACATGAGCCTTTACTACTGTTCTATTTGCGTGAATTTATCTTGACCTGCAATTATTGCTTGATTCCGAGATCACCACCAGTAAATGAGttgcatttgatttgatttatttttttaaatggacttTTATCTCTTAAGTTTATTACACGTTGCTGTCATATAGTATCCAGTATTGCATAAAGCTGCAATTTGTTATAGGATTCTACTGTGATTCAGGGATTCAGCATACAGTGTGATGTTTATAAACATCACTTTTAGCTTTTATATAATGtgcaaatgtatttgaaatgccTGTGTAacaaaattaagtgtttttatgacttttcacTGACAGCAACTGCAACGTTGAAAAGTTCTGTAGTAACCATAAAAGATGGTGCATATAGCATATTGTACAGTGAGTGGTACTGTCTCAACCAGGATGTTTATGTCGGCGAAGAGAATTTTCACATATCTGACACTTTCTTATACAGTATGTgattgataaatattttatattttataaccaTTTTCAAATCCACTTATCGTATAACATCATGGTGTTAAGGGAGCACCTCAGGGTTTTTCACGGTACAGATGGAGGCCATTACTGACCAGTTTGGTTTCTAAAACGAACTTGCATCGTTTtggaaattatatttaacatttgttatGCTTGTGAAATTATGCAATTTCTAGAGCCTTAACTTTTAAGAAAGGAGggagataaatatttttttcttctaaaataatataaagatatttaagcGTTTAGGTGACAAACACCAAAGTTGGGAAACTCTTTGCTTTGTGGGGAAAATGTGAAATGAGATCGTGATGATGTGAGTTTATATTTGTGACCTTATTTTGAAAGTGCCATATGATGGTTAAAATGTAACGTTGCGGAATTACTGACTAGTTTTAATACAGCTAAATTTTTTTGTGGGTAAACATAATGTGACAAAGAGATTCGGATGTCATAGTTCCAGTTGTATAATAGTTTTGTCCCAAACCTACATGTTTGCTGCTTCAACCAGATTTCTCAAACAAGCCTCAGGTTAACTCACCTCTCTAATGTAACAATGTGATCTTTTAAGTGTTAATGCCTCACTAGTAACCCCTGTGTCCCAACTAGATTGTGTCCCATTTGTAACACTTTGTAACAACATCAGCTTGTGTAACCTCCATATTCTGGAACAAATATGTTATTTAGCCTGATCCTGTCCTGAGCTTTTTGACCTTTGCTTGATTAAAATCTGTGTAACACCAA
>XM_043260039.1
AGAAACGGCTTCATTTCTCTGAACCGCCGTCACGTCGAAAGTTTACACGCATGGCATTACACAATCATCAGTGATAAACTATAGGTTCCCACAGGAAAGCCACACTCTGAAGAAGTGTTGCAGGCACCGGAAGTTAGGAGCATGGGGCAGCATCTTGGGAAACGTGAGCCACATACTGTTCCTAAGggGGCATCAACTGTATCTGAACCCGTCCCCACAGACTCACAAGATGAGGTATTTGGACTGGGGGAGGCGGACCTCAACCAGAACAATGGGTGCTCCAGCAAGAGTCCAGTGGTGACTGACTCCATGAACGCTGCAGTAGATCAGAGCAGCTGGAGCCATCTGAGCTCAGACGACCCTAATGCCTCAGGGCCCCGGCCCCACTTGATCCGCCTCTTTTCTCGAGATGCCCCAGGTCGCGAGGACAACACCTTCAAAGACCGCCCCTCGGAGTCTGATGAGCTGCAGACCATCCATGAGCACAGCGGAGCTGGCTCAGAGTGCGGTTCCGAGTGTGCAGAGTAGGACCTAAAGTAGATTTCCTCTTTGCCCTCTCTTTCCTCACTCCTACTTTGGAAACAAACACACCGCTGCAGAGATTAAAGCTAACACTCAGCATGGCATCTGCAAGCTCTTCGCAGTCAACATTCAGACTGGGCCGCAGTAAGAAGAATCCTACTGGTTATGGATCAGATTGGAAAGTTCtttggaggggaaaaaaagaagaagggaAAGGTGAGGATTGAGCAGGCATTCAGAGTTCTCCACATGAGCCTTTACTACTGTTCTATTTGCGTGAATTTATCTTGACCTGCAATTATTGCTTGATTCCGAGATCACCACCAGTAAATGAGttgcatttgatttgatttatttttttaaatggacttTTATCTCTTAAGTTTATTACACGTTGCTGTCATATAGTATCCAGTATTGCATAAAGCTGCAATTTGTTATAGGATTCTACTGTGATTCAGGGATTCAGCATACAGTGTGATGTTTATAAACATCACTTTTAGCTTTTATATAATGtgcaaatgtatttgaaatgccTGTGTAacaaaattaagtgtttttatgacttttcacTGACAGCAACTGCAACGTTGAAAAGTTCTGTAGTAACCATAAAAGATGGTGCATATAGCATATTGTACAGTGAGTGGTACTGTCTCAACCAGGATGTTTATGTCGGCGAAGAGAATTTTCACATATCTGACACTTTCTTATACAGTATGTgattgataaatattttatattttataaccaTTTTCAAATCCACTTATCGTATAACATCATGGTGTTAAGGGAGCACCTCAGGGTTTTTCACGGTACAGATGGAGGCCATTACTGACCAGTTTGGTTTCTAAAACGAACTTGCATCGTTTtggaaattatatttaacatttgttatGCTTGTGAAATTATGCAATTTCTAGAGCCTTAACTTTTAAGAAAGGAGggagataaatatttttttcttctaaaataatataaagatatttaagcGTTTAGGTGACAAACACCAAAGTTGGGAAACTCTTTGCTTTGTGGGGAAAATGTGAAATGAGATCGTGATGATGTGAGTTTATATTTGTGACCTTATTTTGAAAGTGCCATATGATGGTTAAAATGTAACGTTGCGGAATTACTGACTAGTTTTAATACAGCTAAATTTTTTTGTGGGTAAACATAATGTGACAAAGAGATTCGGATGTCATAGTTCCAGTTGTATAATAGTTTTGTCCCAAACCTACATGTTTGCTGCTTCAACCAGATTTCTCAAACAAGCCTCAGGTTAACTCACCTCTCTAATGTAACAATGTGATCTTTTAAGTGTTAATGCCTCACTAGTAACCCCTGTGTCCCAACTAGATTGTGTCCCATTTGTAACACTTTGTAACAACATCAGCTTGTGTAACCTCCATATTCTGGAACAAATATGTTATTTAGCCTGATCCTGTCCTGAGCTTTTTGACCTTTGCTTGATTAAAATCTGTGTAACACCAA

Function

symbol description
mbp Enables calmodulin binding activity. Involved in several processes, including maintenance of blood-brain barrier; negative regulation of heterotypic cell-cell adhesion; and positive regulation of macromolecule metabolic process. Located in myelin sheath. Part of protein-containing complex. Implicated in multiple sclerosis.

NR:

description
PREDICTED: myelin basic protein-like isoform X1

GO:

id name namespace
GO:0005886 plasma membrane cellular_component
GO:0043209 myelin sheath cellular_component
GO:0019911 structural constituent of myelin sheath molecular_function

KEGG:

id description
K17269 MBP; myelin basic protein

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043260038.1 True 2071 mRNA 0.41 4 1496586 1510434
XM_043260039.1 False 2016 mRNA 0.41 4 1496586 1509311

Neighbor

gene id symbol gene type direction distance location
LOC122361052 foxo1b,LOC107686122,LOC107746988,LOC107588742,LOC107577289,LOC107691691 coding downstream 204273 1282311 ~ 1292313 (-)
LOC122361256 NA coding downstream 1201601 294867 ~ 294985 (-)
LOC122361163 NA coding downstream 1218112 278356 ~ 278474 (-)
LOC122361151 NA coding downstream 1218507 277961 ~ 278079 (-)
LOC122361280 NA coding downstream 1220481 275987 ~ 276105 (-)
pmvk pmvk,LOC107551729,LOC107717898,LOC107735019,LOC107661023,LOC107714427,LOC107697277 coding upstream 34853 1545287 ~ 1549931 (-)
si:ch73-341k19.1 LOC107551746 coding upstream 137933 1648367 ~ 1654527 (-)
nt5c3a LOC107714420,LOC107661006,LOC107551731,LOC107697280,LOC107720166,LOC107581689 coding upstream 146114 1656548 ~ 1662627 (-)
foxo6a LOC107714419,LOC107551733,LOC107661026,LOC107720174,LOC107697267,LOC107581751 coding upstream 174470 1684904 ~ 1704721 (-)
med18 med18,LOC107714426,LOC107661027,LOC107697268,LOC107720175 coding upstream 207601 1718035 ~ 1720115 (-)
G109320 NA non-coding downstream 170652 1325620 ~ 1325934 (-)
G109316 NA non-coding downstream 215331 1280870 ~ 1281255 (-)
G109308 zmp:0000001073,LOC107713869,LOC107692477,LOC107566287,LOC107564399 non-coding downstream 300757 1113743 ~ 1195829 (-)
G109292 NA non-coding downstream 530512 965738 ~ 966074 (-)
G109283 NA non-coding downstream 685978 810033 ~ 810608 (-)
G109430 NA non-coding upstream 10849 1521283 ~ 1521485 (-)
G109425 LOC107714432,LOC107661002,LOC107551745,LOC107717891,LOC107697276,LOC107581694 non-coding upstream 17659 1528093 ~ 1542296 (-)
G109439 NA non-coding upstream 125982 1636416 ~ 1636997 (-)
G109440 NA non-coding upstream 130343 1640777 ~ 1641312 (-)
G109441 bmper,LOC107661004,LOC107697278,LOC107551747,LOC107720165 non-coding upstream 132196 1642630 ~ 1643043 (-)
G109287 NA other downstream 613834 882459 ~ 882752 (-)
G109275 NA other downstream 863689 632465 ~ 632897 (-)
prdm1a prdm1,prdm1a,LOC107714407,LOC107697283,LOC107551748,LOC107661008,LOC107581686 other upstream 230686 1741120 ~ 1964161 (-)
G109600 NA other upstream 1603408 3113842 ~ 3129979 (-)
G109724 LOC107084717,LOC106511825 other upstream 2584323 4094757 ~ 4095504 (-)
vegfaa vegfa,vegfaa,LOC107703930,LOC107559057,LOC107725277,LOC107688978,LOC106605015 other upstream 3721777 5232211 ~ 5245558 (-)
si:dkey-283b15.2 si:dkey-283b15.2,si:dkey-14o18.2,LOC107688992,LOC107559040,LOC107558638,LOC108410647 other upstream 4272233 5782667 ~ 5790534 (-)

Expression


Co-expression Network