pnisr (pnisr,LOC107704944,LOC107716852,LOC107700755)


Basic Information

Item Value
gene id pnisr
gene name pnisr,LOC107704944,LOC107716852,LOC107700755
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056714.1
NCBI id CM032083.1
chromosome length 28146790
location 23572971 ~ 23579881 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043260063.1
GGTCACCGTTGCTGCTATTGTTTCCGGGTCATCGTTTCATCGCCATTTTACTGGCGAGAATCGGAGAAGTGGAGAGGATTCACACGGTGAGAGATGTGGGACCAGGGAGGACAGCCCTGGCCTCAGTGGCCCTTGGGCTCACAGCAGCAGTGGATGCAGTCTTTTCAGCATCAGCAAGATCCAGgacAAGTAGACTGGGCTGCTCTAGCACAAGCATGGATTGCACAGAAAGAATCCACCGGAGGGGTTGCCGAACAGCAGGGGGTTCAGCCCAACGGCCAGGATATACAGAACATGGAACCTCCAGCCCATAATAACCACGGTGCCTTTCCCGGCGATCATAATTTTGGAAGAGGTTGGCAACCTGAGTGGGGAATGCATGGccagcctcctcctcctccccctccgGAACAAGCATGGATTCCTCCTGGACAAGGACCGATGGATGTCGTCAACCCGTCGGAAGACAGCAACAGTCAAGATAGTTTGGAGTTTCCTGGAGACCCACACCGTGGAGGCTTTCCTCAAAACAGTCATGGGTTTGGGGGTCAGCCCGAGCCTTACCCTATGGGCCCAGTTGGCGTCAATCAGTTTGATTATCAACATGGAGCAGCACCAACAGGGGCAGCATATGGACCACCCTCCACCGGCTTTCATGCACCTTATTGGCCCGAAGGACCGCAGAACAGAAGAGACCGGCTCCCGGGCTTCCGACCAGAAAGGCCCAGATCCCCCAATCAGATAGGAATTAAACCAGAGGCACCTACTCTCgATGCTGTTAAACGGAGGACTTTGCCTGCTTGGATTCGAGAAGGCCTTGAAAAGATGGATCGTGAGAAGCAGAAAAAGTTGGAGAAGGAGAGGATGGAGAAAGAGCGTGCTGAAATGGCAAATAATGAAAGAGATAGCGATATGGTAGAGGAGGAAGGTGATGGGCCTCGGTTGCCACGCAAGAGCAAATTTGacagtgatgatgaagatggtgAAGAAGATGGCGCTGGGGAGGACGCCGTGTCGGGGAGAAGGTTGGAGTTTGGTGTTAAAAGTTCTCCTCCTGTTCAAGAAGACCAAAGTGAGCCAGAAATGACAGAAGAGGAGAAAGAGTTTCAGTTGATGCTAATGACTAAAACTCTTCTTACTGAAGTCCTCCTTGAAGTCACAAATGAGGAAATCTTCCTGGTGGCTAAAGAGACCCATCGCAAAGCCACTAAAGCTCCTGCAAAACAGCTGGCACAGTCAAATGCACTGGCTTCTCTGACTGGTCTCGGAGGGCTGGGTGAGTACGGCTCGGACGAGAGTGAGAATGAGGAGCGACGTGCGAAGGGCTCGGACTCATCGGACACCGATGATGAGGAGCTGCTGCACCGAAGTCGCCAGAAACAGGACGCCTTCCGTCGCAAAGAGAGGGAGCAGCAGCAACTGCAGGAGAGGCTGGCACTGGAGGTACAGACTGTAAAAGaAGACTTGGCATCGGACAGAGTAAGCAGAGAGAGGGCAGGTTATGAGGAGGAGCAGACGGAGTTTAAACACAAACAGGAAGTTAGGGAAAGGGAGGCAGAGCCCACATTAGAGCGTCGCAGGTCACGTAGTGAGCCTGAGGTCAGTGAGGTCAAGCGGGCGAGCAAAGAGCACACAGGGCGTAACGGAGGAAGTGCCAGCCCCTCGCCAAGTGAGCGACGTAGCCGCACCTCCAGCTCAAGCTCTTCTAGCAGCCgttcctcttcatcctcctcatcctcagcCTCCTCTCACAGCTCCTCCCGCTCCTCGTCTCCCAGACGGAAAAGGCGACGCAGCCGCTCCGCCTCTCGTGGGACTCGCAGGCGCAGCCGAAGTCGCAGCTCTCGCAGACGACAGTCAGAGCGCGACAAGGCCAGAGACAGAAGGCGGGGCAGCCACGCACGTAGCACCGAACGTTCCTCTCGCCATAGGAAGCGCAGCCATTCGCGGCAGCGCAGGTCCAGCAGGGGCCGCAGGAGCAGGTCCAAGGCCAGTCGCAGCCGCAGCAGAGAGAGGCGGCGCAGCAGGGACCGCAGGCGCAGCCGAAGTCGCAGCACGAGCCGCAGCAGGAGGAAACAGAAGGCCTCCAGCAAGGAcagggagagagacaggaggAAAGAGAGGAGCCGGAGTCACGAAAAGGATAAGAAGAAGAAAGAttcagataaaaagaaagacaaacagaagGGCAAGGAGAAAGAGGGCGAGGGCAGTTCAGTAAGGGGCGAGGAGGACGACGCCAAATCGAGGCGGAAAAAGGAGAGCGACTCTCACAGTGAGAGGTTTTCCCGGCAAGACAGTAAATCTAGCAAAAAAGGCTCCGCCAAAGCTAGCAAGAAGTACTCTGATTCAGAGTCCAGCAGGAGCAGGTCCCCTTCCCCTGAGGTTAGCAAAGAGAAAAAGTCAAAGAAATCAAAACGTAGTCGGTCAAGGTCAACGGAAAGGTCTCACAAGTCTGGTAAGAAGGCAAGCCGCAAACACAAGTCTAAGTCACGATCAAGGTCAACATCTCCCAGCCGCCGCAAGCGTTGAGGGGCGTTCTGCCTCTGATCTGTgcacttctttttaaaattccacGAGTTAACAGGCTTGTCTCATTATCGAGGCAACGTTGTAGGTGAACTCTCCACTCCAAACTCCCTCACTCCcttctttttgtaaatatatggtATTTTTAAGTGTTGTCTTCAAAACAGGAGATTTTGAAtgatagtttctttttttttgccttgtatTATGCAAGACTAAGCGTTCAAGTAGTCAATAGAGCCTTGAAActgtaacaattttaaaaccTAACACCAGAGGAAATAAATTCTCGTTTCATGTAAATTGTCCAATAAAACAAGAATGATTCTTTCTGTCTGA
>XM_043260064.1
TTCAGAGTCCGGCGCTTTTTCTTCGCATCAGCCTCGGCGCCCGCTGAACTAGTCAATTTCGTGCGTTTAACCCGAGAGAAGAAAGTTTTTAATAAGTGTCGATATTGAAGACGCGCGGCCTAACGCTTGCGCGGCGACGCTTATGTCTATTTAATTCACGTCGTAATTGCATTCTGTGAAACACGGAAAGGATTCACACGGTGAGAGATGTGGGACCAGGGAGGACAGCCCTGGCCTCAGTGGCCCTTGGGCTCACAGCAGCAGTGGATGCAGTCTTTTCAGCATCAGCAAGATCCAGgacAAGTAGACTGGGCTGCTCTAGCACAAGCATGGATTGCACAGAAAGAATCCACCGGAGGGGTTGCCGAACAGCAGGGGGTTCAGCCCAACGGCCAGGATATACAGAACATGGAACCTCCAGCCCATAATAACCACGGTGCCTTTCCCGGCGATCATAATTTTGGAAGAGGTTGGCAACCTGAGTGGGGAATGCATGGccagcctcctcctcctccccctccgGAACAAGCATGGATTCCTCCTGGACAAGGACCGATGGATGTCGTCAACCCGTCGGAAGACAGCAACAGTCAAGATAGTTTGGAGTTTCCTGGAGACCCACACCGTGGAGGCTTTCCTCAAAACAGTCATGGGTTTGGGGGTCAGCCCGAGCCTTACCCTATGGGCCCAGTTGGCGTCAATCAGTTTGATTATCAACATGGAGCAGCACCAACAGGGGCAGCATATGGACCACCCTCCACCGGCTTTCATGCACCTTATTGGCCCGAAGGACCGCAGAACAGAAGAGACCGGCTCCCGGGCTTCCGACCAGAAAGGCCCAGATCCCCCAATCAGATAGGAATTAAACCAGAGGCACCTACTCTCgATGCTGTTAAACGGAGGACTTTGCCTGCTTGGATTCGAGAAGGCCTTGAAAAGATGGATCGTGAGAAGCAGAAAAAGTTGGAGAAGGAGAGGATGGAGAAAGAGCGTGCTGAAATGGCAAATAATGAAAGAGATAGCGATATGGTAGAGGAGGAAGGTGATGGGCCTCGGTTGCCACGCAAGAGCAAATTTGacagtgatgatgaagatggtgAAGAAGATGGCGCTGGGGAGGACGCCGTGTCGGGGAGAAGGTTGGAGTTTGGTGTTAAAAGTTCTCCTCCTGTTCAAGAAGACCAAAGTGAGCCAGAAATGACAGAAGAGGAGAAAGAGTTTCAGTTGATGCTAATGACTAAAACTCTTCTTACTGAAGTCCTCCTTGAAGTCACAAATGAGGAAATCTTCCTGGTGGCTAAAGAGACCCATCGCAAAGCCACTAAAGCTCCTGCAAAACAGCTGGCACAGTCAAATGCACTGGCTTCTCTGACTGGTCTCGGAGGGCTGGGTGAGTACGGCTCGGACGAGAGTGAGAATGAGGAGCGACGTGCGAAGGGCTCGGACTCATCGGACACCGATGATGAGGAGCTGCTGCACCGAAGTCGCCAGAAACAGGACGCCTTCCGTCGCAAAGAGAGGGAGCAGCAGCAACTGCAGGAGAGGCTGGCACTGGAGGTACAGACTGTAAAAGaAGACTTGGCATCGGACAGAGTAAGCAGAGAGAGGGCAGGTTATGAGGAGGAGCAGACGGAGTTTAAACACAAACAGGAAGTTAGGGAAAGGGAGGCAGAGCCCACATTAGAGCGTCGCAGGTCACGTAGTGAGCCTGAGGTCAGTGAGGTCAAGCGGGCGAGCAAAGAGCACACAGGGCGTAACGGAGGAAGTGCCAGCCCCTCGCCAAGTGAGCGACGTAGCCGCACCTCCAGCTCAAGCTCTTCTAGCAGCCgttcctcttcatcctcctcatcctcagcCTCCTCTCACAGCTCCTCCCGCTCCTCGTCTCCCAGACGGAAAAGGCGACGCAGCCGCTCCGCCTCTCGTGGGACTCGCAGGCGCAGCCGAAGTCGCAGCTCTCGCAGACGACAGTCAGAGCGCGACAAGGCCAGAGACAGAAGGCGGGGCAGCCACGCACGTAGCACCGAACGTTCCTCTCGCCATAGGAAGCGCAGCCATTCGCGGCAGCGCAGGTCCAGCAGGGGCCGCAGGAGCAGGTCCAAGGCCAGTCGCAGCCGCAGCAGAGAGAGGCGGCGCAGCAGGGACCGCAGGCGCAGCCGAAGTCGCAGCACGAGCCGCAGCAGGAGGAAACAGAAGGCCTCCAGCAAGGAcagggagagagacaggaggAAAGAGAGGAGCCGGAGTCACGAAAAGGATAAGAAGAAGAAAGAttcagataaaaagaaagacaaacagaagGGCAAGGAGAAAGAGGGCGAGGGCAGTTCAGTAAGGGGCGAGGAGGACGACGCCAAATCGAGGCGGAAAAAGGAGAGCGACTCTCACAGTGAGAGGTTTTCCCGGCAAGACAGTAAATCTAGCAAAAAAGGCTCCGCCAAAGCTAGCAAGAAGTACTCTGATTCAGAGTCCAGCAGGAGCAGGTCCCCTTCCCCTGAGGTTAGCAAAGAGAAAAAGTCAAAGAAATCAAAACGTAGTCGGTCAAGGTCAACGGAAAGGTCTCACAAGTCTGGTAAGAAGGCAAGCCGCAAACACAAGTCTAAGTCACGATCAAGGTCAACATCTCCCAGCCGCCGCAAGCGTTGAGGGGCGTTCTGCCTCTGATCTGTgcacttctttttaaaattccacGAGTTAACAGGCTTGTCTCATTATCGAGGCAACGTTGTAGGTGAACTCTCCACTCCAAACTCCCTCACTCCcttctttttgtaaatatatggtATTTTTAAGTGTTGTCTTCAAAACAGGAGATTTTGAAtgatagtttctttttttttgccttgtatTATGCAAGACTAAGCGTTCAAGTAGTCAATAGAGCCTTGAAActgtaacaattttaaaaccTAACACCAGAGGAAATAAATTCTCGTTTCATGTAAATTGTCCAATAAAACAAGAATGATTCTTTCTGTCTGA
>XM_043260065.1
GGTCACCGTTGCTGCTATTGTTTCCGGGTCATCGTTTCATCGCCATTTTACTGGCGAGAATCGGAGAAGTGGAGAGGATTCACACGGTGAGAGATGTGGGACCAGGGAGGACAGCCCTGGCCTCAGTGGCCCTTGGGCTCACAGCAGCAGTGGATGCAGTCTTTTCAGCATCAGCAAGATCCAGgacAAGTAGACTGGGCTGCTCTAGCACAAGCATGGATTGCACAGAAAGAATCCACCGGAGGGGTTGCCGAACAGCAGGGGGTTCAGCCCAACGGCCAGGATATACAGAACATGGAACCTCCAGCCCATAATAACCACGGTGCCTTTCCCGGCGATCATAATTTTGGAAGAGGTTGGCAACCTGAGTGGGGAATGCATGGccagcctcctcctcctccccctccgGAACAAGCATGGATTCCTCCTGGACAAGGACCGATGGATGTCGTCAACCCGTCGGAAGACAGCAACAGTCAAGATAGTTTGGAGTTTCCTGGAGACCCACACCGTGGAGGCTTTCCTCAAAACAGTCATGGGTTTGGGGGTCAGCCCGAGCCTTACCCTATGGGCCCAGTTGGCGTCAATCAGTTTGATTATCAACATGGAGCAGCACCAACAGGGGCAGCATATGGACCACCCTCCACCGGCTTTCATGCACCTTATTGGCCCGAAGGACCGCAGAACAGAAGAGACCGGCTCCCGGGCTTCCGACCAGAAAGGCCCAGATCCCCCAATCAGATAGGAATTAAACCAGAGGCACCTACTCTCgATGCTGTTAAACGGAGGACTTTGCCTGCTTGGATTCGAGAAGGCCTTGAAAAGATGGATCGTGAGAAGCAGAAAAAGTTGGAGAAGGAGAGGATGGAGAAAGAGCGTGCTGAAATGGCAAATAATGAAAGAGATAGCGATATGGTAGAGGAGGAAGGTGATGGGCCTCGGTTGCCACGCAAGAGCAAATTTGacagtgatgatgaagatggtgAAGAAGATGGCGCTGGGGAGGACGCCGTGTCGGGGAGAAGGTTGGAGTTTGGTGTTAAAAGTTCTCCTCCTGTTCAAGAAGACCAAAGTGAGCCAGAAATGACAGAAGAGGAGAAAGAGTTTCAGTTGATGCTAATGACTAAAACTCTTCTTACTGAAGTCCTCCTTGAAGTCACAAATGAGGAAATCTTCCTGGTGGCTAAAGAGACCCATCGCAAAGCCACTAAAGCTCCTGCAAAACAGCTGGCACAGTCAAATGCACTGGCTTCTCTGACTGGTCTCGGAGGGCTGGGTGAGTACGGCTCGGACGAGAGTGAGAATGAGGAGCGACGTGCGAAGGGCTCGGACTCATCGGACACCGATGATGAGGAGCTGCTGCACCGAAGTCGCCAGAAACAGGACGCCTTCCGTCGCAAAGAGAGGGAGCAGCAGCAACTGCAGGAGAGGCTGGCACTGGAGGTACAGACTGTAAAAGACTTGGCATCGGACAGAGTAAGCAGAGAGAGGGCAGGTTATGAGGAGGAGCAGACGGAGTTTAAACACAAACAGGAAGTTAGGGAAAGGGAGGCAGAGCCCACATTAGAGCGTCGCAGGTCACGTAGTGAGCCTGAGGTCAGTGAGGTCAAGCGGGCGAGCAAAGAGCACACAGGGCGTAACGGAGGAAGTGCCAGCCCCTCGCCAAGTGAGCGACGTAGCCGCACCTCCAGCTCAAGCTCTTCTAGCAGCCgttcctcttcatcctcctcatcctcagcCTCCTCTCACAGCTCCTCCCGCTCCTCGTCTCCCAGACGGAAAAGGCGACGCAGCCGCTCCGCCTCTCGTGGGACTCGCAGGCGCAGCCGAAGTCGCAGCTCTCGCAGACGACAGTCAGAGCGCGACAAGGCCAGAGACAGAAGGCGGGGCAGCCACGCACGTAGCACCGAACGTTCCTCTCGCCATAGGAAGCGCAGCCATTCGCGGCAGCGCAGGTCCAGCAGGGGCCGCAGGAGCAGGTCCAAGGCCAGTCGCAGCCGCAGCAGAGAGAGGCGGCGCAGCAGGGACCGCAGGCGCAGCCGAAGTCGCAGCACGAGCCGCAGCAGGAGGAAACAGAAGGCCTCCAGCAAGGAcagggagagagacaggaggAAAGAGAGGAGCCGGAGTCACGAAAAGGATAAGAAGAAGAAAGAttcagataaaaagaaagacaaacagaagGGCAAGGAGAAAGAGGGCGAGGGCAGTTCAGTAAGGGGCGAGGAGGACGACGCCAAATCGAGGCGGAAAAAGGAGAGCGACTCTCACAGTGAGAGGTTTTCCCGGCAAGACAGTAAATCTAGCAAAAAAGGCTCCGCCAAAGCTAGCAAGAAGTACTCTGATTCAGAGTCCAGCAGGAGCAGGTCCCCTTCCCCTGAGGTTAGCAAAGAGAAAAAGTCAAAGAAATCAAAACGTAGTCGGTCAAGGTCAACGGAAAGGTCTCACAAGTCTGGTAAGAAGGCAAGCCGCAAACACAAGTCTAAGTCACGATCAAGGTCAACATCTCCCAGCCGCCGCAAGCGTTGAGGGGCGTTCTGCCTCTGATCTGTgcacttctttttaaaattccacGAGTTAACAGGCTTGTCTCATTATCGAGGCAACGTTGTAGGTGAACTCTCCACTCCAAACTCCCTCACTCCcttctttttgtaaatatatggtATTTTTAAGTGTTGTCTTCAAAACAGGAGATTTTGAAtgatagtttctttttttttgccttgtatTATGCAAGACTAAGCGTTCAAGTAGTCAATAGAGCCTTGAAActgtaacaattttaaaaccTAACACCAGAGGAAATAAATTCTCGTTTCATGTAAATTGTCCAATAAAACAAGAATGATTCTTTCTGTCTGA

Function

symbol description
pnisr Predicted to be active in nuclear speck and presynaptic active zone. Orthologous to human PNISR (PNN interacting serine and arginine rich protein).

NR:

description
arginine/serine-rich protein PNISR-like isoform X1

GO: NA

KEGG:

id description
K13170 PNISR, SFRS18; arginine/serine-rich protein PNISR

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043260063.1 False 2868 mRNA 0.53 12 23572971 23579881
XM_043260064.1 True 2982 mRNA 0.53 12 23572971 23579766
XM_043260065.1 False 2865 mRNA 0.53 12 23572971 23579881

Neighbor

gene id symbol gene type direction distance location
coq3 LOC107711746,LOC107700757,LOC107716851,LOC107552820 coding downstream 654 23567058 ~ 23572317 (-)
faxcb faxcb,LOC107587769,LOC107700756,LOC107711729,LOC107704942,LOC107716849,LOC107552822 coding downstream 6127 23556775 ~ 23566844 (-)
fbxl4 fbxl4,LOC107587770,LOC107716847,LOC107704940,LOC107711744,LOC107552823,LOC107700759 coding downstream 36149 23527088 ~ 23536822 (-)
mms22l mms22l,LOC107716844,LOC107587771,LOC107711743,LOC107552829,LOC107700675 coding downstream 169341 23389423 ~ 23403630 (-)
calhm6 fam26f,LOC107700692,LOC107552824,LOC107716816 coding downstream 204018 23367501 ~ 23368953 (-)
me1 me1,LOC107704946,LOC107700750,LOC107587764,LOC107716854,LOC106583951,LOC106605032 coding upstream 97109 23676990 ~ 23736637 (-)
snap91a snap91,LOC107704947,LOC107716855,LOC107700747,LOC107597123 coding upstream 172455 23752336 ~ 23787702 (-)
dop1a LOC107587763,LOC107704948,LOC107597122,LOC107700746,LOC107716858 coding upstream 209225 23789106 ~ 23811675 (-)
pnrc2 pnrc2,LOC107597121,LOC107700745,LOC107704949,LOC107716857,LOC107587761 coding upstream 232070 23811951 ~ 23815789 (-)
utp11 utp11,utp11l coding upstream 504606 24084487 ~ 24087339 (-)
G115669 NA non-coding downstream 245078 23326208 ~ 23327893 (-)
G115631 NA non-coding downstream 383321 23185050 ~ 23189650 (-)
G115621 NA non-coding downstream 405031 23165193 ~ 23167940 (-)
G115563 LOC101883708,LOC105900568,LOC106574835 non-coding downstream 495101 23074303 ~ 23077870 (-)
G115611 NA non-coding downstream 499521 23072259 ~ 23073450 (-)
G115910 NA non-coding upstream 236016 23815897 ~ 23816157 (-)
G115911 NA non-coding upstream 237019 23816900 ~ 23817100 (-)
G115914 cnr2,LOC107716825,LOC107704869,LOC107587892,LOC107700673,LOC107597120 non-coding upstream 240638 23820519 ~ 23822288 (-)
LOC122359981 NA non-coding upstream 464879 24044760 ~ 24057262 (-)
G115939 NA non-coding upstream 497750 24077631 ~ 24077867 (-)
G115882 pou3f2,pou3f2b,LOC106584047,LOC106605033,LOC107711728,LOC107704941,LOC107700690 other downstream 48589 23519808 ~ 23524382 (-)
G115554 NA other downstream 639004 22932627 ~ 22933967 (-)
cdc42se1 cdc42se1,LOC107704996,LOC107705438,LOC107588480,LOC107700699,LOC107556109,LOC105018866 other downstream 671784 22892102 ~ 22901187 (-)
eny2 eny2,LOC107600664,LOC107551183,LOC105908906 other downstream 1483879 22087641 ~ 22089092 (-)
G115207 gpd1l,LOC107705153,LOC107713825,LOC107551192,LOC107666803,LOC107600618,LOC108434205 other downstream 1604436 21964855 ~ 21968535 (-)
usp45 usp45,LOC107716853,LOC107587766,LOC107711747,LOC107552817,LOC107704836 other upstream 3112 23582993 ~ 23609841 (-)
mchr2a mchr2,si:dkey-165n16.5,LOC107587893,LOC107597140,LOC107700674,LOC107716821,LOC107711724 other upstream 88184 23668065 ~ 23675345 (-)
phactr4b phactr4b,LOC107587745,LOC107597106,LOC107700669 other upstream 737601 24317482 ~ 24339788 (-)
LOC122359997 LOC107732827,LOC107704842,LOC107587847,LOC107700682,LOC107756122,LOC107597135 other upstream 784759 24364640 ~ 24369566 (-)
serinc2l serinc2l,LOC107587884,LOC107704843,LOC107732828,LOC107755451,LOC107597105 other upstream 834345 24414226 ~ 24473365 (-)

Expression


Co-expression Network