faxcb (faxcb,LOC107587769,LOC107700756,LOC107711729,LOC107704942,LOC107716849,LOC107552822)


Basic Information

Item Value
gene id faxcb
gene name faxcb,LOC107587769,LOC107700756,LOC107711729,LOC107704942,LOC107716849,LOC107552822
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056714.1
NCBI id CM032083.1
chromosome length 28146790
location 23556775 ~ 23566844 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043260066.1
ctgtttaataataattttatttgccTAGCTGCCCTGCGTGATGCGTCGTGACGTCACTCAGCTTCAGCACAGCAACAAAGGAGGATGCGGAGCCGCGCGCGGGAGCCGGATCTCgttaaaatgcttttctttcacTTCGCGAGCCCGACATAACACACAACCATGTAACATTTGTCCGTATTTACATGGATAAATGAAGTGGCGCAGGATTCGTTGGAGGAAGcggggggagagagagaatgtaCTGGGTCGCGGGTTTCGCCTCCTCCCGCTCGTTCGTGgttgatcttggccggaatcaGAGCCCGTCCTTCGGGTTGTGTGGCTCTGATGAGCGCCACTTATTTTATGGGTACATAGTAGCCGTCCCTGTGCAGGATTTCGGCGGGATCATGTCGGGATTGGTATCGGATTCCTGGTGGAGGAAGACGCTTTACATCACCGGAGGTGCCCTGCTGGCCGCGGCTGCGTATCTGCTGCACGAGCTGCTCTCCATCAGGAAAGAACAACAGTTGGATTCTAAAGACGCCATCATCCTTCACCAGTTCTCCAGGCCAAAAAACGGGGTGCCAAGCCTTTCACCTTTCTGCCTGAAGATGGAGACCTATCTGCGGATGGTTGATCTGCCCTATCAAAGTTACTTTGATGGGAGCCTCTCCTCCCAGGGCAAGATGCCTTGGATCGAGTATAATTATGAGCAGGTGTGCGGAACTGAATTTATAATTGACTTTCTGGAGGAGAAACTTGGTGTGAGTCTAAACAAGAGTCTGAGCGCTCAGGAGCAGGCGGTAGCGCGGGCCATCACCACCATGGTGGAGGAACACTTGTACTGGACCATTGCATACTGTCAGTGGGTGGATAACGTTCAGGAGACCCAAAGGATGCTGGACCTTCCCGGGCCCCTCAGTGATCTGCTGAAATGGATCCTGTGTCAGCTGACCGGGGGCATTGTAAAGCGAGAGATGTACTGTCACGGCATTGGCTGCTTCACTAAAGAGGAAGTTTACACCCTCATGGAGAAGGACATGCGCACGCTGGCCACACTGTTAGGGGATAAGAAGTACATCATGGGTCCAAAGCTGTCCAGTGTGGATGCCACAGTGTTCGGTCACCTTGCACAAGCCATGTGGACGCTGCCTGGGACACGGCCTGAGCAGCTCATTAAAGGAGAACTGATTAACCTCGCCATGTACTGTGAGCGCATAAGGAGGAAGTTCTGGCCCGAGTGGTTTGTGGACTTAGAGGACTTCTGTTATGACAGTGACAACGACACTAGCAGCGGGACACCCACCTGCATGCTGGACCTTGGTCTCTTTTCCAGGACAGACACTTTAGAGGAAAGTGATCTAAGCCTCCCGTCACACAGTAATACACACTCGCAAGACTCGGACCGCTCCGTACACTCGCTCTCAGACTCTGACATTGAAGCAGATGGCTCGGATGTGGAGCAGCAGGTCAAGGGTAAAATCTAATAGAGGCTGTTTTTTATCTGGTGTAAGATAGTTTTTTTTGGGTTGCATTATGACTCAAGAACTCAAAGTGATATTTCTTGCCTGGATGAATAACACTTTGATGAACAAAATGCGTGTACACAATGTGACATCAGTGACATGTACACCTCCAGATTTACAAAATCATCCATTCTTATCATTGTAAAAAACATTACGCCTCCATCCATAGTTTCATTACGCTTTCGAATTAGCTTTCATTTCCAGGTAAcaaacatttcatgttttttcagaCCGCTCAATATGTGTCTTTTCTCCAGCTTCAATCAACGTTTAATTAACATGTGCTCCAGAACAGAATCATGTAGCAAAATACTAGCTTGCATGATTTTAGGATGTTGCGGTTTAACGTTTCGTGCCAACTGAAACTAAATCTGTGTGAATTCCTCCCTCCTGTTCAGACCTAATAATTCCTTCCCGAGATCAGCTAAAGTACACAAAATAGAATTGATGGGGATGGATAAAAGGATTTATGAAGCATTTAATCCCGGGTTctgcataaaataacaaaacgaGAATCCAATCTTCACAAAAATTTAGgctaatacaataaaaaacaaatcccTTTCTGTCGTTTTTATTTGTTAGGGCTCCAGTGTGTGTCATCAGTGTCAGACTCTTGATCGGTCTGAATGGTGCTTAATGCCTGTGTGCCTGACTGCAACCATTTGTACACGTGTGACAGTCTTTCCTCTCCATCCCCATGTGTCTCTTTCGGTTCGATTCTGTAATACAGACCGGTTTGGGTGTCACCACCAGAGGGCACTGTGACCATTCACATGCTGAGTGGGTCCTATGCAGCCTCTTGCTTGAGAGTCGCTTGAAGCTTCTGCCTTAAAAGaacgttttaaatattaataacaacagtGAACCTCTAGTGAACACTAAACGGTCAGCTTCGGTGGCGTAGGAGTCTgatcatgcatttgttttgttttttttatccatgtgtgtgatttgtgtaCCAAAGTGTAGTACGTTGAGCAGATTTGCCTTAGTTGAGGGAAAATTGTTGTGATTAACAGCCGCATGATGAATTGACCCTCTTTCTGTTAAATTTACTTGAAACCCAAGCCTGTActtaatgaatttatttcaatCCCTTGTAGTGTTTGATCTTTTATGCTGACTTCTGTCGTTTATTTGGCATATTGTTGCTTTGCACATTTTAGATTATTGAAAGACTTTGGACAATGTAAAGATACGCAGGACTTAAGACGGGGTCCATACAATCAGTGAGATATGTTATATGTGCGTGTGATATACAGTAGTTACCTGTAATACATCATTTACCTGcatgtgcgtttgtgtgtgcgtcTATATGTGTGAGCTGGTGTAAAGTTCACCAGTGAAAACCTCCTAGCAAATATTTATCCCCTGTATAGTATCGAGGCTAAAGTTAAGTACACATAAACCCAGTCTCGTATGAATTTTGTGttgatattaattaatttgcaacttattatttttgtttaaagtaatacaaattatttttcattgacTTGGGGAGATGGTCAGCTAAAAAGGGTCTATTcgaataattataaattatgaaaCTGTTCAAATTCTCattcaaaaacatgcatttaaattttacagtgtgatgtttgtttattaatagaCTTTTAGAGATGTATCTGTGTGTTGGGAACGTAGCTGGATTATGTTCTCATAAGATGTCAGTTTTGCTATAGATCTTATATTAGATCTTGAAGCCATATTAGAGAGTTAATTTCCTGTTTGTGGAAACAGAATGATGgatataagtataaaatataaatataatatatatatatatatatatatatatatatatatatatatatatgattctaTAAGATTCTGCCTAATCTGAATCAGCTATAAAATATTGTGCATAACTGAGACCCTCTCGTGAGTGTTTAGTTATCCTGAACTGAGTGGTTGTTTGACAATGATTGCTCTAAAACATCAATTAAAATAGCTGTGACAATTAAAACGTATGCATGaggtgtatgtttttttatgctctttgttATTAGTGAATTTAgtttaatgcttttgtttacctttttttttttttttttttttttgcttttattaagtATCGTGCAACACCTCTGGGTCGTCAAATTTTTACTAGAGAGGTCTTGGACTCTTTACTTTTTGTGTCACTCTGTTTGTAGGCTCCATTGCATTAGTTTAGTTTACCTCAGGCGATCACATTAAACACTGATTTATTCAA

Function

symbol description
faxcb Predicted to be active in cytoplasm. Orthologous to human FAXC (failed axon connections homolog, metaxin like GST domain containing).

NR:

description
PREDICTED: failed axon connections homolog isoform X2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043260066.1 True 3732 mRNA 0.42 6 23556775 23566844

Neighbor

gene id symbol gene type direction distance location
fbxl4 fbxl4,LOC107587770,LOC107716847,LOC107704940,LOC107711744,LOC107552823,LOC107700759 coding downstream 19953 23527088 ~ 23536822 (-)
mms22l mms22l,LOC107716844,LOC107587771,LOC107711743,LOC107552829,LOC107700675 coding downstream 153145 23389423 ~ 23403630 (-)
calhm6 fam26f,LOC107700692,LOC107552824,LOC107716816 coding downstream 187822 23367501 ~ 23368953 (-)
calhm5.1 LOC107704861,LOC107716815,LOC107587898,LOC107711741,LOC107552825 coding downstream 189402 23362337 ~ 23367373 (-)
rwdd1 rwdd1,LOC107587776,LOC107704860,LOC107700695,LOC107552826 coding downstream 195401 23358473 ~ 23361374 (-)
coq3 LOC107711746,LOC107700757,LOC107716851,LOC107552820 coding upstream 214 23567058 ~ 23572317 (-)
pnisr pnisr,LOC107704944,LOC107716852,LOC107700755 coding upstream 6127 23572971 ~ 23579881 (-)
me1 me1,LOC107704946,LOC107700750,LOC107587764,LOC107716854,LOC106583951,LOC106605032 coding upstream 110146 23676990 ~ 23736637 (-)
snap91a snap91,LOC107704947,LOC107716855,LOC107700747,LOC107597123 coding upstream 185492 23752336 ~ 23787702 (-)
dop1a LOC107587763,LOC107704948,LOC107597122,LOC107700746,LOC107716858 coding upstream 222262 23789106 ~ 23811675 (-)
G115669 NA non-coding downstream 228882 23326208 ~ 23327893 (-)
G115631 NA non-coding downstream 367125 23185050 ~ 23189650 (-)
G115621 NA non-coding downstream 388835 23165193 ~ 23167940 (-)
G115563 LOC101883708,LOC105900568,LOC106574835 non-coding downstream 478905 23074303 ~ 23077870 (-)
G115611 NA non-coding downstream 483325 23072259 ~ 23073450 (-)
G115910 NA non-coding upstream 249053 23815897 ~ 23816157 (-)
G115911 NA non-coding upstream 250056 23816900 ~ 23817100 (-)
G115914 cnr2,LOC107716825,LOC107704869,LOC107587892,LOC107700673,LOC107597120 non-coding upstream 253675 23820519 ~ 23822288 (-)
LOC122359981 NA non-coding upstream 477916 24044760 ~ 24057262 (-)
G115939 NA non-coding upstream 510787 24077631 ~ 24077867 (-)
G115882 pou3f2,pou3f2b,LOC106584047,LOC106605033,LOC107711728,LOC107704941,LOC107700690 other downstream 32393 23519808 ~ 23524382 (-)
G115554 NA other downstream 622808 22932627 ~ 22933967 (-)
cdc42se1 cdc42se1,LOC107704996,LOC107705438,LOC107588480,LOC107700699,LOC107556109,LOC105018866 other downstream 655588 22892102 ~ 22901187 (-)
eny2 eny2,LOC107600664,LOC107551183,LOC105908906 other downstream 1467683 22087641 ~ 22089092 (-)
G115207 gpd1l,LOC107705153,LOC107713825,LOC107551192,LOC107666803,LOC107600618,LOC108434205 other downstream 1588240 21964855 ~ 21968535 (-)
usp45 usp45,LOC107716853,LOC107587766,LOC107711747,LOC107552817,LOC107704836 other upstream 16149 23582993 ~ 23609841 (-)
mchr2a mchr2,si:dkey-165n16.5,LOC107587893,LOC107597140,LOC107700674,LOC107716821,LOC107711724 other upstream 101221 23668065 ~ 23675345 (-)
phactr4b phactr4b,LOC107587745,LOC107597106,LOC107700669 other upstream 750638 24317482 ~ 24339788 (-)
LOC122359997 LOC107732827,LOC107704842,LOC107587847,LOC107700682,LOC107756122,LOC107597135 other upstream 797796 24364640 ~ 24369566 (-)
serinc2l serinc2l,LOC107587884,LOC107704843,LOC107732828,LOC107755451,LOC107597105 other upstream 847382 24414226 ~ 24473365 (-)

Expression


Co-expression Network