coq3 (LOC107711746,LOC107700757,LOC107716851,LOC107552820)


Basic Information

Item Value
gene id coq3
gene name LOC107711746,LOC107700757,LOC107716851,LOC107552820
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056714.1
NCBI id CM032083.1
chromosome length 28146790
location 23567058 ~ 23572317 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043260068.1
TTTCACGCCGAGTTTCTGCTCGGTCAGAAGTTCTGCGAACACGCCACGGTCACATTGGATTTACTGACTGTCTGTGATAATTTAAGTTACATGTGACGCAGTAAAATGCAATCATGTACTCCAAGAAATTAGTACGATTAGCTTTTGGGCTGTTGGCAGAATCTGCGTTTAGATGCCCGTCAACACGAAGCGTGTCCTCCGGAGTGAAAGCAGTGCGGTCTCTGTGCAGCTGGACGGTGTGTCAGCATCACAGACAGAAACATCAGTTGTCGAACGGATTGACCCGTCTAAATGTCCGCACGGTTTCCCAGACTACTCTCGACCCCGCCGAGGTGCGGAAGTTTCAGGCCATGGCGAGCAAGTGGTGGGATCTACAGGGAGAGTTTGCAGCCCTGCACTCCATGAATGACATAAGAGTGCCTTTCATACGGGATAATTTGTTGAATGTGCACGGCGTGCGGCAGTTGGGCAAACCTCTGGCTGGACTGAGAATCCTGGACGTTGGCTGTGGTGGAGGAGTGCTGAGCGAGCCACTAGGGAGGTTAGGAGCGGACGTGCTGGGAATCGACCCAGTGGAGGACAGTGTGCGGACCGCAGAGCTGCACTCCTCCTATGATCCTGAATTACGGGACAGAGTTCGCTATGAGGCCTGCACCCTGGAGGAGCTCGCAGAGGAGGAAGTAGAGGGATTTCATGCTGTAGTGGCATCTGAGGTGGTGGAACATCTGGCTGACCTGGACGCCTTTGCCAGCTGTTGTCAGCAGGTGTTGAAGcctGGTGGCTCTCTTTTCATCACCACTCTTAACAAAACCAACTTGTCCTACGTTTTTGGGATTGTGGCGGCAGAGCAGCTGTTAAGGATTGTACCGAGTGGCACTCACGACTGGGAGAAGTTCATCAGCCCAGAGGATTTGGAACGACTTCTGGAGTCTTTTGGTTTCTACGTGGAGGCTATCAGAGGCATGATGTACAATCCTCTCACTGGAGCTTGGAGCTGGCAGAAGAGCACTGCCATCAACTATGCCCTGCATGCAATCAAACGCAGAGAAGAACCCCAGCCTGACCGGATGTGGGCTGAGAGTGAGAATATAGATGAGCCAGGTCGAGCCACGAGTTACAGCTGAGCTACTTTAATGTGGAAATGCTATCAAAAGACTTCACCTTCTCGAGAACAGAGAACTAACCCACACTTAAGATCTCAAAATATGTTTCATAGTGAAAGAGTTGCTGAACCGGTAATAATCATTCTTTGCAATGTGTTActtgataaaacattttgtatgaGAAGCACGATTCATAGAACATCTTTTGTAAAGCTCTTGTTAAAATGAGAACGGAATCAGATTGAAGCGCTTTTGGTCTGCTTAACATGCAGCAGTCGCATGCCACATGTCATTTCAAAAGATTTGTTGGTATATTTTAACAATCATTtagttgtgtgttttgtggtgGTGATCTTTGGGTGTTTTTTGTCACAGGCCAAACAGACATAGAGAATTATATAATGATTTGGGACTTAAAAAGTATAggtactaaataaaatgaaatcactTGTGTCATA

Function

NR:

description
ubiquinone biosynthesis O-methyltransferase, mitochondrial-like

GO:

id name namespace
GO:0006744 ubiquinone biosynthetic process biological_process
GO:0032259 methylation biological_process
GO:0008425 2-polyprenyl-6-methoxy-1,4-benzoquinone methyltransferase activity molecular_function

KEGG:

id description
K00591 COQ3; polyprenyldihydroxybenzoate methyltransferase / 3-demethylubiquinol 3-O-methyltransferase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043260068.1 True 1561 mRNA 0.48 6 23567058 23572317

Neighbor

gene id symbol gene type direction distance location
faxcb faxcb,LOC107587769,LOC107700756,LOC107711729,LOC107704942,LOC107716849,LOC107552822 coding downstream 214 23556775 ~ 23566844 (-)
fbxl4 fbxl4,LOC107587770,LOC107716847,LOC107704940,LOC107711744,LOC107552823,LOC107700759 coding downstream 30236 23527088 ~ 23536822 (-)
mms22l mms22l,LOC107716844,LOC107587771,LOC107711743,LOC107552829,LOC107700675 coding downstream 163428 23389423 ~ 23403630 (-)
calhm6 fam26f,LOC107700692,LOC107552824,LOC107716816 coding downstream 198105 23367501 ~ 23368953 (-)
calhm5.1 LOC107704861,LOC107716815,LOC107587898,LOC107711741,LOC107552825 coding downstream 199685 23362337 ~ 23367373 (-)
pnisr pnisr,LOC107704944,LOC107716852,LOC107700755 coding upstream 654 23572971 ~ 23579881 (-)
me1 me1,LOC107704946,LOC107700750,LOC107587764,LOC107716854,LOC106583951,LOC106605032 coding upstream 104673 23676990 ~ 23736637 (-)
snap91a snap91,LOC107704947,LOC107716855,LOC107700747,LOC107597123 coding upstream 180019 23752336 ~ 23787702 (-)
dop1a LOC107587763,LOC107704948,LOC107597122,LOC107700746,LOC107716858 coding upstream 216789 23789106 ~ 23811675 (-)
pnrc2 pnrc2,LOC107597121,LOC107700745,LOC107704949,LOC107716857,LOC107587761 coding upstream 239634 23811951 ~ 23815789 (-)
G115669 NA non-coding downstream 239165 23326208 ~ 23327893 (-)
G115631 NA non-coding downstream 377408 23185050 ~ 23189650 (-)
G115621 NA non-coding downstream 399118 23165193 ~ 23167940 (-)
G115563 LOC101883708,LOC105900568,LOC106574835 non-coding downstream 489188 23074303 ~ 23077870 (-)
G115611 NA non-coding downstream 493608 23072259 ~ 23073450 (-)
G115910 NA non-coding upstream 243580 23815897 ~ 23816157 (-)
G115911 NA non-coding upstream 244583 23816900 ~ 23817100 (-)
G115914 cnr2,LOC107716825,LOC107704869,LOC107587892,LOC107700673,LOC107597120 non-coding upstream 248202 23820519 ~ 23822288 (-)
LOC122359981 NA non-coding upstream 472443 24044760 ~ 24057262 (-)
G115939 NA non-coding upstream 505314 24077631 ~ 24077867 (-)
G115882 pou3f2,pou3f2b,LOC106584047,LOC106605033,LOC107711728,LOC107704941,LOC107700690 other downstream 42676 23519808 ~ 23524382 (-)
G115554 NA other downstream 633091 22932627 ~ 22933967 (-)
cdc42se1 cdc42se1,LOC107704996,LOC107705438,LOC107588480,LOC107700699,LOC107556109,LOC105018866 other downstream 665871 22892102 ~ 22901187 (-)
eny2 eny2,LOC107600664,LOC107551183,LOC105908906 other downstream 1477966 22087641 ~ 22089092 (-)
G115207 gpd1l,LOC107705153,LOC107713825,LOC107551192,LOC107666803,LOC107600618,LOC108434205 other downstream 1598523 21964855 ~ 21968535 (-)
usp45 usp45,LOC107716853,LOC107587766,LOC107711747,LOC107552817,LOC107704836 other upstream 10676 23582993 ~ 23609841 (-)
mchr2a mchr2,si:dkey-165n16.5,LOC107587893,LOC107597140,LOC107700674,LOC107716821,LOC107711724 other upstream 95748 23668065 ~ 23675345 (-)
phactr4b phactr4b,LOC107587745,LOC107597106,LOC107700669 other upstream 745165 24317482 ~ 24339788 (-)
LOC122359997 LOC107732827,LOC107704842,LOC107587847,LOC107700682,LOC107756122,LOC107597135 other upstream 792323 24364640 ~ 24369566 (-)
serinc2l serinc2l,LOC107587884,LOC107704843,LOC107732828,LOC107755451,LOC107597105 other upstream 841909 24414226 ~ 24473365 (-)

Expression


Co-expression Network