LOC122359881 (LOC107716830,LOC107587785,LOC107682987)


Basic Information

Item Value
gene id LOC122359881
gene name LOC107716830,LOC107587785,LOC107682987
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056714.1
NCBI id CM032083.1
chromosome length 28146790
location 23264286 ~ 23266472 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043260092.1
AGCTCCGAGTCACTTGTTCGAATCTAACGATTCTTAAAGAATCCGACGTTTCACCAAGCGAAAGCGCCAAGCAGTGGATGATTTACGGTTGTGTCGTTCCTAAACGTCATTTATAATCCGTACAAATACGCGCTTGTTGTAGTTAACGGACTTCAAACAGTCGTTGCTAGTCTGTCGTAGCGAATGAGGGGTTTTCTGCCATAAAGTTAATCTCTCGTTCTAACTGCGCTGAACTTTAACACGGTTTCTCTTCAAGTGCACGAGTGAGACAACTACTCCAAGATGGCCAACTCAAGAAAAGTGGTCGAGTTTTTCTACGATATTGTTTCTCCGTATTCCTGGCTGGCGTTTGAAgtGATGTGTCGCTATAAAACTGTTTGGAACATCGACCTCAAATTTAAACCAGCATATTTAGGGGGAGTAATGAATGAATCGGGCAATCGACCCCCTGCAGTAGTCCCAAATAAGTTTTATTACATGACCACAGATCTGAAGCGAGTGTCTGAATATTTTGGCGTTCCCGTGGTCGCACCATCAGATGTTTTTGAGGCAATGTTTGAGAAGGGCTCTTTGAATGCTATGCGTTTTTTGACTGCTGTAGCAGAGAAGGAAAAAGAGGGAGACGTTATGGTGGAAAGGGTGTCTAGAGAGCTCTGGAAAAGAATCTGGAGCACTGATCAGGATGTTACCCAGCCTGCTTCATTCATTCAGGCAGGATTAAAGGCAGGTCTCTCAGCCAATGAGTTGGAGGAAATTCTGGCCCTTACCAAATCTCAGCCAATCAAAGACAAGCTGAAGAGCATCACACAAGAAGCACTGGGCTATCAATGCTTTGGTTTCCCTTTCATTGTGTGTCACGTGAACGGGAAGGCTGAGTGCTTCTTTGGTTCTGACAGATTTGAGATCATGGCTCAATGCATCGGTGAGAAGTGGGTGGGGCCTCACCCGGTCAAACCTACATCCAAAATATGATCAATACTTCTAAGTACAATTTTAGGAACGCTGTACGTTCACATTGCTTTTACGAAATAATCATACTGAATTcaaaagacaggaaaaaaacaagctgaaatagaaacagaaatattaagatGTCTATATACTGTACTGTTTCTTCTTCTCACCCAAggctgtaaaaactgtaatattgaatgttattgcagtttaaaataaagcgtttccactctaa

Function

NR:

description
PREDICTED: glutathione S-transferase kappa 1-like isoform X2

GO:

id name namespace
GO:0015035 protein disulfide oxidoreductase activity molecular_function

KEGG:

id description
K13299 GSTK1; glutathione S-transferase kappa 1

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043260092.1 True 1189 mRNA 0.42 8 23264286 23266472

Neighbor

gene id symbol gene type direction distance location
LOC122360080 NA coding downstream 2332 23258003 ~ 23261954 (-)
LOC122359973 LOC107672119,LOC107552844,LOC107704924,LOC107716832 coding downstream 9710 23251560 ~ 23254576 (-)
styk1b LOC107587900,LOC107714598,LOC107724775,LOC107704922,LOC107672192,LOC107552846 coding downstream 14489 23244256 ~ 23249797 (-)
rap1gapl si:ch1073-90m23.1,LOC107724779,LOC107587789,LOC107672182,LOC107704921,LOC107714601 coding downstream 30498 23224070 ~ 23233788 (-)
rbfox1l rbfox1l,LOC107704918,LOC107587790,LOC107714602,LOC107724799,LOC107552848,LOC107672019,LOC103045177,LOC108443663 coding downstream 42935 23209559 ~ 23221351 (-)
cnot3a cnot3a,LOC107711735,LOC107587779,LOC107700763,LOC107552836,LOC107704926 coding upstream 40222 23306694 ~ 23314761 (-)
kpna5 kpna5,LOC107704934,LOC107716841,LOC107552832,LOC107711738 coding upstream 72979 23339451 ~ 23348014 (-)
rwdd1 rwdd1,LOC107587776,LOC107704860,LOC107700695,LOC107552826 coding upstream 92001 23358473 ~ 23361374 (-)
calhm5.1 LOC107704861,LOC107716815,LOC107587898,LOC107711741,LOC107552825 coding upstream 95865 23362337 ~ 23367373 (-)
calhm6 fam26f,LOC107700692,LOC107552824,LOC107716816 coding upstream 101029 23367501 ~ 23368953 (-)
G115631 NA non-coding downstream 74636 23185050 ~ 23189650 (-)
G115621 NA non-coding downstream 96346 23165193 ~ 23167940 (-)
G115563 LOC101883708,LOC105900568,LOC106574835 non-coding downstream 186416 23074303 ~ 23077870 (-)
G115611 NA non-coding downstream 190836 23072259 ~ 23073450 (-)
G115601 rcc1,LOC107597108,LOC107700729,LOC107704965 non-coding downstream 207756 23056095 ~ 23056530 (-)
G115669 NA non-coding upstream 59736 23326208 ~ 23327893 (-)
G115910 NA non-coding upstream 549425 23815897 ~ 23816157 (-)
G115911 NA non-coding upstream 550428 23816900 ~ 23817100 (-)
G115914 cnr2,LOC107716825,LOC107704869,LOC107587892,LOC107700673,LOC107597120 non-coding upstream 554047 23820519 ~ 23822288 (-)
LOC122359981 NA non-coding upstream 778288 24044760 ~ 24057262 (-)
G115554 NA other downstream 330319 22932627 ~ 22933967 (-)
cdc42se1 cdc42se1,LOC107704996,LOC107705438,LOC107588480,LOC107700699,LOC107556109,LOC105018866 other downstream 363099 22892102 ~ 22901187 (-)
eny2 eny2,LOC107600664,LOC107551183,LOC105908906 other downstream 1175194 22087641 ~ 22089092 (-)
G115207 gpd1l,LOC107705153,LOC107713825,LOC107551192,LOC107666803,LOC107600618,LOC108434205 other downstream 1295751 21964855 ~ 21968535 (-)
G115149 NA other downstream 1460482 21801475 ~ 21803804 (-)
G115882 pou3f2,pou3f2b,LOC106584047,LOC106605033,LOC107711728,LOC107704941,LOC107700690 other upstream 253336 23519808 ~ 23524382 (-)
usp45 usp45,LOC107716853,LOC107587766,LOC107711747,LOC107552817,LOC107704836 other upstream 316521 23582993 ~ 23609841 (-)
mchr2a mchr2,si:dkey-165n16.5,LOC107587893,LOC107597140,LOC107700674,LOC107716821,LOC107711724 other upstream 401593 23668065 ~ 23675345 (-)
phactr4b phactr4b,LOC107587745,LOC107597106,LOC107700669 other upstream 1051010 24317482 ~ 24339788 (-)
LOC122359997 LOC107732827,LOC107704842,LOC107587847,LOC107700682,LOC107756122,LOC107597135 other upstream 1098168 24364640 ~ 24369566 (-)

Expression


Co-expression Network