id4 (id4,LOC107656716,LOC107748665,LOC107751915,LOC107596695,LOC107684172,LOC107564867)


Basic Information

Item Value
gene id id4
gene name id4,LOC107656716,LOC107748665,LOC107751915,LOC107596695,LOC107684172,LOC107564867
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056714.1
NCBI id CM032083.1
chromosome length 28146790
location 9026980 ~ 9029706 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043260162.1
CGCTGCTCCATCATCACGGGAGCTCGTGACTGACCGGTTTCTCCTCGCGCAGGACTGTCAAAGCTCGAGCGGGTGGCGCCTCCCCTTTTCCTCTATATATGACCAGCCTCAACTCATCCGCTGTTTTACACCGTGCGTTCCCACTCAGAGAGGAGATGTGGTCAGGATAGAACCGCGCTCCTTTTTCTCTCGTCCTCCGAATTGCGTTTTTAACCGAAACCTCTTGTTGCGTCCCGCGCGCGTTTGTTCTACCACCCCCTCCCCTTCTCGCTTAGctctttgtgcttttgtttattaCAATGAAGGCCAGCGCGCCGGTTCGCCCTCACAAGGTTTCTTCTGGCTGCAGTCAGCTCTCCTTGCGTTATTTGGCGGAGCGCAGCCGATGCAAAATGGAAGAGGAGGATCTTTTCTGCCTGCAGTACGACATGAACGACTGCTACAGCCGACTCAAGCGCCTGGTGCCCACTATTCCGCAGGATAAGAAAGTCAGCAAAGTGGAGATCCTCCAGCATGTCATTGACTATATCCTGGACCTGCAGCTGGCGTTGGAGACGCACCCGGCTCTCCTGAAACAGACGAGCCCACCCGCCTCCACACGGACCCCTCTCACACAAATCAACACAGAGCAGCGGACGACGGGTGTCAATAAGGAAGACTCAATTTTATGTCGCTGAAATGTTGCACGCCGGTGTGCACTGAACCCATCCAAAGCCAAGCCCAGCTTCACCAGGGAATCCAACACACACCAGGCCCGATCGCAGGGGAGCAGCACTGAAACTAATAGCTACTAAAtcataatatgtaaacattttaacgTCGGCTGTCAAAGATGCGGGGCGAAGCCAGCCAGATTTCTCCTGTGCCCCcgttctgttctctctctctctctctctctctctctctctctcggcggGGGAAGCGCTGGATTTGGACAGCATCGGTGAGCCCTCTTCGCCCCCTTTCTACTGCAATTCCAATTGGAAAcgaactaaactaaaaaaaaaacaaaaaccctgcATCTAATTCGACTGTGCTAACTGTAAAGCTTTACGAGTCAAAATGGAAATGTAAACATCTGACATCTTCGTtaggtgatttattttttatttttttgtttgtgttgaaCAGGGATTTCCCTGCTGTTTAATATTGTAAAGAACTACGCTAAGTGTTGACTTAAATAATACTGTACATAACAAGGAGGACGttctataaatgtatgtgtaagaGAGTATATGTTCAACCGGCTGATtgtaattattctaaaatattttttatcggaaatgttttgttctgtAAATACTGTGTTTTCACATAAATGTAGTGAATGATTACATGACGTTCTGCTAATAAAGGTCTCACATCATAAACTAA

Function

symbol description
id4 Predicted to enable protein dimerization activity. Acts upstream of or within atrioventricular canal development; atrioventricular valve development; and regulation of Wnt signaling pathway involved in heart development. Predicted to be located in cytoplasm. Predicted to be active in nucleus. Is expressed in central nervous system; heart; and retina. Orthologous to human ID4 (inhibitor of DNA binding 4, HLH protein).

NR:

description
DNA-binding protein inhibitor ID-4-like

GO:

id name namespace
GO:0045892 negative regulation of transcription, DNA-templated biological_process
GO:0005634 nucleus cellular_component
GO:0005737 cytoplasm cellular_component
GO:0046983 protein dimerization activity molecular_function

KEGG:

id description
K17695 ID4; DNA-binding protein inhibitor ID4

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043260162.1 True 1377 mRNA 0.47 3 9026980 9029706

Neighbor

gene id symbol gene type direction distance location
ncalda ncalda,ncald,LOC100692199,LOC105901278,LOC106931336,LOC103042493,LOC108268956 coding downstream 29994 8961054 ~ 8996986 (-)
grhl2a grhl2a,LOC107748679,LOC107564858,LOC107684167,LOC107596692,LOC107741979,LOC107656701 coding downstream 69530 8946171 ~ 8957450 (-)
tapbpl LOC107749174,LOC107684168,LOC107596689,LOC107741975,LOC107564859,LOC107656706 coding downstream 82332 8938547 ~ 8944648 (-)
LOC122361100 LOC107736302,LOC107741982 coding downstream 164451 8857464 ~ 8862529 (-)
zgc:174935 zgc:174935,LOC107748729,LOC107684162,LOC107707940,LOC107596684 coding downstream 182156 8841494 ~ 8844824 (-)
cep76 cep76,LOC107684173 coding upstream 73808 9103514 ~ 9110755 (-)
ptpn2a LOC107748621,LOC107656702,LOC107686952 coding upstream 82556 9112262 ~ 9118118 (-)
LOC122360027 LOC107751895,LOC107656720 coding upstream 116194 9145900 ~ 9148999 (-)
LOC122360802 LOC107749154,LOC107596765,LOC107686954 coding upstream 119409 9149115 ~ 9157421 (-)
cmtm8b LOC107749122,LOC107702023,LOC107564882,LOC107751904,LOC107661990,LOC107570991 coding upstream 289849 9319555 ~ 9322529 (-)
G110849 NA non-coding downstream 19448 9007297 ~ 9007532 (-)
G110842 NA non-coding downstream 21774 9004538 ~ 9005206 (-)
G110836 NA non-coding downstream 25552 9000787 ~ 9001428 (-)
G110807 NA non-coding downstream 180987 8845525 ~ 8845993 (-)
G110773 NA non-coding downstream 436346 8589898 ~ 8590634 (-)
G110852 NA non-coding upstream 1429 9031135 ~ 9031449 (-)
G110897 NA non-coding upstream 96979 9126685 ~ 9191339 (-)
G111005 NA non-coding upstream 356473 9386179 ~ 9387391 (-)
G111021 LOC102788557 non-coding upstream 570226 9599932 ~ 9607073 (-)
G111024 NA non-coding upstream 590413 9620119 ~ 9620453 (-)
wu:fj39g12 nppcl,LOC107744681,LOC107699924,LOC107749278,LOC107685603 other downstream 390758 8633350 ~ 8636222 (-)
G110556 NA other downstream 710295 8312265 ~ 8316685 (-)
G110554 cbx3,LOC107596654,LOC107743152,LOC107744695,LOC107550827 other downstream 724735 8298789 ~ 8302245 (-)
G110544 NA other downstream 810385 8216029 ~ 8216595 (-)
mkxb mkxb,LOC107681765,LOC107566716,LOC107691300,LOC107550429,LOC107747522,LOC107708850 other downstream 934525 8082900 ~ 8092455 (-)
G110911 LOC107749154,LOC107686954,LOC107596765,LOC108428931,LOC108268943,LOC107751895,LOC107656720 other upstream 116224 9145930 ~ 9152183 (-)
G110974 NA other upstream 241265 9270971 ~ 9272605 (-)
gask1a fam198a,LOC107732434,LOC107657576,LOC107751903,LOC107704082 other upstream 847505 9877211 ~ 9902981 (-)
LOC122361037 cables1,LOC107708521,LOC107747516,LOC107681774,LOC107691165 other upstream 1715870 10745576 ~ 10764305 (-)
LOC122360812 cobl,LOC107746964,LOC107684220,LOC107551210 other upstream 1827814 10857520 ~ 10883424 (-)

Expression


Co-expression Network