LOC122359944


Basic Information

Item Value
gene id LOC122359944
gene name NA
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056714.1
NCBI id CM032083.1
chromosome length 28146790
location 13120866 ~ 13123887 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043260183.1
GAAAcgtaaaaaatgatttgttgtgTAAAAACGGTAATATCTGTCTCCATCTGCTGGTCatgtttattattgttcataAGTGATTTTTGTTGTACGTTTAAATGATTAGCTAGACAGCTCTAGGGTAAAAAAGGGCAAAAATGCAATTGCACTAGCAAAGCTACTGCTGATTGAACAAAGCATTACGCTTTATAGCCTTATACAGCCTTATAAGCCctagtcaatcaatcaataattttttttatttatatagcgcttttaataacacaggttgcatcaaagcactactGTCAAGCACAACTGCAATAACAGAAACTCTCTCAAATGACAAACGTAActgaacattaaacattaactaatgtttacCTTCACTCAACAACACATGAGGTAGTTTCTGGATGCATTCTTCAGTTAGTTTAGATATAGCCATCAAGTTCAGAATTACTGGCTGAGTTGCATAAAGCCTGAAGATCTCCAAAATTCTCCCTCAAAGTATTTATCAGACCTAGTGCACCCTGACTGCAAAAGAACTGATTCTCTGCTTTATTTCCTGCGACCTTCGCCACATCCTGCATCACATTTAGCACGGGCTGCTGGAGGATGAAACGTTTAGTTGAGACTTCTCCACTAAGAGTAGCCTCACAGCACTCCTGATCATTTCTTGAGATGCTCTGACCTTTAACCGCTGCTTCACCTTATCAATCTCACTCTGAATTTTATTCAGCTCCGCATCACACTCTTCAACCTCATTATGTATGCTAGAGATCCTGGACTGGTAATCAGACACCTTCATGCTGCTCTCTTTCACTCGAGACTCATTTTCTTTAAGCTCGTCTTCAGCATCACTGATAGCCTTTGACGCCTCATCAGTTGCACGTTCTCCTTCACAGATCATGATTATAcctagagaaaaaaaagaactatcAGCCACAAATTATGTTAGTTTTTCCTCTTTAGGATGATAGCAGgggtttaaaaatatttctcaccAAGAATCCATCCAATAATTGGAAACATTGCAAATATTGCCCCTGCAGTTTTTAACCCCCTCGCCTGTGAACTTCATGCCTTGATGCATATAGCAAGTCTGCTAACATCTAAAATATGTCCAAAATATCCAGCAGCTGATGAATGTGGAGAGTGAGAATGATGCCACTGACTGGACAAATCTGTAtgatcagaaagaaaaatgtgcaaaagCTTATTTCATGGACAAACAGTTCAAAAGAATCAGTGATGATTTAAAGAAAATCCCTAAATGCCCAGCAAAAGAAACAAGTTATGAGTTTTTGAAAAATGGGCATTGAAATATGTGACCAGATATCAATATGTGCCCCAGATGGCAAATGTGACGAACAAAATTCTAAAGAGACTATAAAAGCAGTCTTAGATCTGATCGAGTCGGCTCATATTTTTTATCGCAGAAGCAAagacaaaacatattttccaGCCAGTGCTCCAACACCACCAATGATGTTTAAAGAAGGAAAAACATCAGAGAACATAAGTGCTCCTCAGAGGGCCACAGAGACTGCACGATTCAGGATAGAGCAGAGCCGAGCTCCGCTAAACAAGACACAAGAGAATTATGAGAAGTGTCTGGAGAACCTAGAGAACAACGAGAAGGAACTAACTGAAATCCTGGTAGCTCTAAAAAATGGTAAACTGAAAGAGATCGACTTCAAAACTACCATACAGATGCTGATCAAAGGAATGGATGCCATGGGGAGAGTGAAGGAGCAATGGGAGAAGATGGTTCGCTTCTTTCAGATGGTTTCCAACATTGTAAAAACCAGCCTGAGCACGACTCTCACAAACTTTGTCTCCACATCAGAGAAAACACAAGCTCTCTCCTACAATGCAAAGCTTTACTCAAAAGATCTGCTCTACATTCAAGCCTTCCAAGCCTGTAACATTGCTAGTCTGGTCCATAGGATCTCTGAAACATTATTTCCAGCAAGTACCTGACGGATCGTGTCAGTTCACTGGGTAAATTAATGGCCATGTAAAAAACAATTTGAGCGTGAGCGACTACTGCTTCAGAACGGCTGTGATGAGGCACAGAAAAGCATTTTACTGCTTgtcctgaaaaataaagaggagtttgacaaaaacagcataacaagacaagaaaaaatgtataaatagttGCTTGCCATTCTGCCTGCTGCTCCTCCAGAACAAACCAAAAGAGTATTCAAGATGTTGTGCAAATTGGATTCAGTGAAGAAGATGCATCATACATCTAAGAAAATCTACCAATTATGTTACAGGCCTGCTAGGATTTAGGCTTTGCTGTCCAGTAGCATGTAATATTCAAAGAGCTAAGCTTAGATTGTAACATCCAAATGCCGTCTTAAATTGTCTAAAacatattatcattttaatcaacaaacaaatcagattaattgaaaataattttaactgaaCATTCTCTCACAAGGATAAAGGCAGTGTTTGCAGGAGTATTATCATTAACAGAAGacacctgattttttttaaaaaaaggtatttgaaactgaaaggtattaaaaactgacatttttaacactctattaatgtatgtgtgtaagagatttcaaaagtaaaaaaaaaaggtattgaCCCTAAattgtttctgtatttaaacAACATAAGTATTTAACATCATATAAGATTAGTATAtgttctgtttaaaaataatataaaaaacatactcTGATTATGCATGATCTTTATGGAAAGTGGAAGTgacttttatgcttttaaatttgtagttagaagaaaactgaaatgtttttgctttctttttctttaatatttaggttttaaaagcCTCTCAGTTAGCTGTGcatgatcatttttttcttgactGAAGAATCTGTTAGTTTTTCCATGCATTTATGTTATGGAATGCCTCCTTACTGAATACGATATTAAAAAATAGTACTGCTACTCAACTAGTAACTGTTGATTTGTCATATGTCTGCTTGTATTTGACTTTGATGTATTTTGTACAATTAAAAGACCTTCCACTCCTTTG

Function

GO:

id name namespace
GO:0008544 epidermis development biological_process

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043260183.1 True 3022 mRNA 0.37 1 13120866 13123887

Neighbor

gene id symbol gene type direction distance location
fdps fdps,LOC107673012,LOC107692580 coding downstream 993 13116477 ~ 13119873 (-)
rusc1 rusc1,LOC107743195,LOC107692542,LOC107596619,LOC107707166,LOC107598429 coding downstream 4771 13100858 ~ 13116095 (-)
dap3 dap3,LOC107685621,LOC107743192,LOC107707170,LOC107598433,LOC107673026 coding downstream 53987 13061035 ~ 13066879 (-)
gba gba,LOC107743191,LOC107685577,LOC107673025,LOC107707168,LOC107598431,LOC107596705,LOC107598447 coding downstream 59939 13055397 ~ 13060927 (-)
polr3c polr3c,LOC107685575,LOC107743190,LOC107673034,LOC107707173 coding downstream 72463 13042826 ~ 13048403 (-)
LOC122359945 NA coding upstream 461 13124348 ~ 13126202 (-)
si:ch211-149k23.9 si:ch211-149k23.9,LOC107673042,LOC107598426,LOC107549453,LOC107692544,LOC108437471,LOC102779492 coding upstream 12760 13136647 ~ 13143911 (-)
atg12 atg12,LOC107692547,LOC107673043 coding upstream 20162 13144049 ~ 13146414 (-)
grwd1 grwd1,LOC107692548,LOC107549456,LOC107750005,LOC107737912,LOC107598422,LOC107673021 coding upstream 28462 13152349 ~ 13157873 (-)
zgc:174888 LOC107549460,LOC107750007,LOC107598425,LOC107692550,LOC107673023,LOC107737913 coding upstream 34915 13158802 ~ 13162784 (-)
G112229 NA non-coding downstream 94737 13024933 ~ 13026129 (-)
G111862 NA non-coding downstream 468460 12567205 ~ 12652406 (-)
G111860 NA non-coding downstream 508872 12557811 ~ 12611994 (-)
G111799 NA non-coding downstream 630746 12489782 ~ 12490120 (-)
G111809 NA non-coding downstream 633173 12486851 ~ 12487693 (-)
G112256 LOC107737914,LOC107549458,LOC107598419,LOC107673038,LOC107750018 non-coding upstream 64032 13187919 ~ 13200640 (-)
G112261 NA non-coding upstream 90043 13213930 ~ 13227818 (-)
G112260 NA non-coding upstream 93316 13217203 ~ 13249624 (-)
G112299 LOC107750016,LOC107549467,LOC107692576 non-coding upstream 165318 13289205 ~ 13292423 (-)
G112315 NA non-coding upstream 307257 13431144 ~ 13434295 (-)
rxrbb rxrbb,rxrba,LOC107596638,LOC107581542,LOC107752838,LOC107743171,LOC107566635 other downstream 742417 12363785 ~ 12378449 (-)
LOC122361049 c16h2orf66,LOC107743229 other downstream 1253551 11865680 ~ 11867315 (-)
G111490 si:dkey-12j5.1,LOC107738871,LOC107549224,LOC107689883,LOC107717803,LOC108256403,LOC108426361,LOC107593733 other downstream 1709089 11410678 ~ 11411777 (-)
LOC122360600 enpp2,LOC107757440,LOC107745056,LOC107697648,LOC107574906,LOC107681346 other downstream 1733873 11333175 ~ 11386993 (-)
G111450 mal2,LOC107757438,LOC107571097,LOC107677950,LOC107738940 other downstream 1834434 11269620 ~ 11286432 (-)
zgc:92606 zgc:92606,LOC107724707,LOC107549485,LOC107598403,LOC107672985,LOC107744286,LOC108432344 other upstream 530173 13654060 ~ 13683909 (-)
G112478 NA other upstream 1110667 14234554 ~ 14301619 (-)
dicp3.3 NA other upstream 1374376 14498263 ~ 14503136 (-)
LOC122359961 riiad1 other upstream 1458592 14582479 ~ 14587869 (-)
si:ch211-105c13.3 si:ch211-105c13.3,LOC107673711,LOC107594941,LOC107582067,LOC107677027,LOC107735771 other upstream 1775295 14899182 ~ 14904907 (-)

Expression


Co-expression Network