polr3glb (polr3gl,polr3glb,LOC107666760,LOC107714326,LOC107592290,LOC107686116)


Basic Information

Item Value
gene id polr3glb
gene name polr3gl,polr3glb,LOC107666760,LOC107714326,LOC107592290,LOC107686116
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056714.1
NCBI id CM032083.1
chromosome length 28146790
location 20239132 ~ 20243565 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043260246.1
GTTTCTGGCAGGAACATTTTCCGCAGCGGcccaaaacaaacatgcagctgTTTGGCGGGTGATTCTACTGCTCCGTTCTACATCAATAAATCTCCAATCTCCATGAAAAACAACTTCCTGCAATATTTACGGATTATCTAATAAATGCTTTGCACAATGAAAAGAAGTTATAAATAAAGAGGGATTTCATCGCATTTTTGTCTATAATGGCAGGAAGGGGCAGAGGGCAGCTTACTTTCTCTGTGGAGATTGTTGGAATCGGTAAAGGAGAAAATCTCCCGCCATCCTCCGTCCAGCCGACCCCTCTATTCCCTCCTTTGGATCAGAAGCCGGTGCCCCTGCAGGCGGGCGAGGAGGCCGAGTACATGCTGGCACTCAAACAGGAGTTCAGAGGAGCCATGAAGACGCTCCCCTTTTACATCCGTCCAGCTGCACCCAAGAAAGATGTGGAGCGTTACTCTGACAAATACCAGAAAACTGAAACCTCTGAAAGCAGTTTGGAATGGAAGCCAGattgGAAGCGTTTTCCGAAGGAGCTGCGCTTGAGAGAAAAGAGACCCCTGAGAGACAAAAGCCAAGCTGTTCCCAAACGGCCCAAACAGCCACGAGTGGACAAAGAGGAGATCATACACAAACTGGAGacTCTGGAGCAGAAAGAGGAAGACAGGAGTTCGGACGAagaggagggagagaaaaagaagccAGAGGAGGAAGAGGCTGAGGGAGAGGAAGAGTATGATGAGGAGGAATTTGAGGATgAAACCGATTACATCATGTCCTACTTTGACAATGGAGAGGAGTTTGGAGGAGACAGTGATGATAATATAGATGAAGCCATTTACTGAAGCAGGCGACGGCGGCTCCATAGCGCCCTCCTCCGTCCGGCGAGTGTCTCTGGAACTGGGTCTGTCCCTCAGGACCTTTCTAGCTTGGATCATTATGTTTGGCAGCTGATGTTAAAATCTGTATGCAGTGGATTTCCTCTCATCCCATCGGTTGGCAGGGCGGCTGATTGCTGACAAAGAAGGTTTGAATCCGAGGGTTACGGGCTAGAGGACATCGAGGCACAAACTTCTCTCTTGATGCAGCTATACCTTCTCAGAGCTTTGTAAATAATCGTTTTTTAACTGGAGAATCGTTTTCATACCTGTTTTAGTACAAGTTTTAGACGGTTGTATTTATCTAAACAGTTTTTATACATCTTAGATTTGTGAAAAAAGGCCGGTAAATGTAGATTGTTCTATTGTGGATGTTAATcacataatattttgtaaagttttaagtcatgtataaatattaatgttactgGCATTTTATGTAATGAAGTCGCACTGTGTCATGACTTTTTCTCATAGATAGATGAGCAGTTCTGTCATGTGGCCTGCAGGAGGTGTGATACTACATTAAAGTACTTGTGGCACaatcatttcaa

Function

symbol description
polr3glb Predicted to act upstream of or within transcription by RNA polymerase III. Predicted to be located in nucleus. Predicted to be part of RNA polymerase III complex. Orthologous to human POLR3GL (RNA polymerase III subunit GL).
polr3gl Predicted to enable chromatin binding activity. Involved in transcription by RNA polymerase III. Located in nucleus. Part of RNA polymerase III complex.

NR:

description
DNA-directed RNA polymerase III subunit RPC7-like isoform X1

GO: NA

KEGG:

id description
K03024 RPC7, POLR3G; DNA-directed RNA polymerase III subunit RPC7

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043260246.1 True 1432 mRNA 0.45 8 20239132 20243565

Neighbor

gene id symbol gene type direction distance location
rundc3b rundc3b,LOC107666772,LOC107686653,LOC107719153 coding downstream 84484 20139412 ~ 20154648 (-)
dbf4 LOC107666861,LOC107719134,LOC107592429,LOC107686229,LOC107714332,LOC107592324 coding downstream 105191 20129043 ~ 20133941 (-)
adam22 adam22,LOC107719137,LOC107714333,LOC107666740 coding downstream 111169 20076807 ~ 20127963 (-)
mrpl32 mrpl32,LOC107592435,LOC107666771,LOC107686307,LOC107714338,LOC107735708,LOC107580730 coding downstream 197771 20039947 ~ 20041361 (-)
ccdc127a ccdc127a,LOC107686768,LOC107719164,LOC107556965,LOC107592531 coding downstream 199945 20036348 ~ 20039187 (-)
si:ch211-135n15.2 LOC107719151,LOC107592495,LOC107666737,LOC107714311,LOC107686628,LOC107592633 coding upstream 17270 20260835 ~ 20264890 (-)
dpy19l1l dpy19l1l,LOC107666881,LOC107719125,LOC107592414,LOC107737812,LOC107686065,LOC107592262 coding upstream 62253 20305818 ~ 20313239 (-)
herpud2 herpud2,LOC107686057,LOC107600485,LOC107719122,LOC107592253,LOC107737813 coding upstream 135615 20379180 ~ 20385456 (-)
pkdc si:ch211-215k15.5,LOC107737834,LOC107592943,LOC107686716 coding upstream 142512 20386077 ~ 20387616 (-)
si:ch211-215k15.4 LOC107666815,LOC107600540,LOC107719123 coding upstream 145909 20389474 ~ 20391866 (-)
G114741 NA non-coding downstream 21551 20216103 ~ 20217581 (-)
G114663 cldn12,LOC107682396,LOC107686255 non-coding downstream 134862 20101044 ~ 20104270 (-)
G114626 LOC107714343,LOC107666800,LOC107592439,LOC107719142 non-coding downstream 267175 19959867 ~ 19971957 (-)
G114611 NA non-coding downstream 519196 19719186 ~ 19719936 (-)
G114608 NA non-coding downstream 545739 19693138 ~ 19693393 (-)
G114747 NA non-coding upstream 1456 20245021 ~ 20245239 (-)
G114768 NA non-coding upstream 59418 20302983 ~ 20305444 (-)
G114771 NA non-coding upstream 98512 20342077 ~ 20409610 (-)
G114798 NA non-coding upstream 231952 20475517 ~ 20475747 (-)
G114801 NA non-coding upstream 240236 20483801 ~ 20484071 (-)
G114715 NA other downstream 61374 20166795 ~ 20177758 (-)
dpys dpys,LOC107728457,LOC107686378,LOC107666745 other downstream 581408 19596432 ~ 19657724 (-)
cd22 LOC107728466,LOC107592448,LOC107666891,LOC107709614,LOC107686701 other downstream 818038 19416962 ~ 19421094 (-)
rpz rpz,LOC107688232,LOC107728474,LOC107592467,LOC107671470,LOC107592140,LOC107726666,LOC107688233 other downstream 1418022 18812238 ~ 18821110 (-)
LOC122360940 fli1,LOC107692484,LOC107709558,LOC107656981 other downstream 1540725 18684573 ~ 18698407 (-)
G114793 NA other upstream 198400 20441965 ~ 20452450 (-)
scn1ba scn1b,scn1ba,LOC107666845,LOC107737825,LOC107719111,LOC107686587 other upstream 392560 20636125 ~ 20650937 (-)
G114901 NA other upstream 408412 20651977 ~ 20653574 (-)
G115003 cpne4a,LOC107592564,LOC107600547,LOC107666882,LOC107713817 other upstream 769042 21012607 ~ 21017105 (-)
G115093 plekhf2,LOC107666819,LOC107600513,LOC107668314,LOC107591926 other upstream 1132325 21375890 ~ 21378836 (-)

Expression


Co-expression Network