vsig10l (vsig10l,LOC107707630)


Basic Information

Item Value
gene id vsig10l
gene name vsig10l,LOC107707630
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056714.1
NCBI id CM032083.1
chromosome length 28146790
location 25735523 ~ 25745044 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043260289.1
actccTGCCTGCTCGCGGTTTTCGTGCAGCTCAAAACTTCTTAAAACTACGAGAAATCACATTCAGCATGTGTTTGCGATCGCACTGGAAGAGGACAGACGGTCGTACCTGTTATTGATCGATGGGTCTGAAGTGACTGATGGGATGTTTTGTCCAGGTGAAGCTCACCTGCGCGGTTGATTTCTCACCTGTCCGTTTTAGGAGCATGACTCCCGTCATCAAAATTAAACCTCGGACAAACCTGCAGGTTTAAGTTTGGGTCTGGCGAAATGCAGACGCCGTTTGGTTTGGTTTATGTTCTTTTGCTCTTCGTTACAGGCAGCGTGTGTTATCTGAGCATCTTACCCAAGGCTCCTGTGTCGGTGGAAGCTCTGGTGGGCCAGAATGTGACCCTCGGTGTGTCTCACGCCGGCGTCCCTCAGCCCGAGGTCATGTGGTTTAAGGGAAGCCTTCTGGTGGCCAGGTGGACCGTGGGTAACGGCTCTCTTTCGGGTGTCGCATCAGGCGTTTTTAAACCAGAACTGAACGGATCGCTCACCTTCATGAACGTGCCGCTCGGTTATAACGGTACATACACCGTAGAAATGAATCATATTGGGGAGGAAAAGGTCAGCGCTACATTTAACCTCTTTGTTTATGACGTGATCACGAATGTGTCCCTGCGCAGCGATCCAGGAGACGCCGTTGAGGGTGAAGCGAGGTTTACCTTGTATTACAGCACACTGCAAGGGGAGGCCAAAGAGGTGCGGTGGTTCTTTAATGGTCTCCAGTTACGAAATGGATCTCGTTATTCCATCGGCGGGAAGAACCTCACGGTAAACCAGCTCGGCAGGAACGACACGGGCCGCTACGCCGCGTCACTAAGCAACCCGTTCAGCTCCGAGACGCAGGGCAGGAACATCACAGTGCTGTATGGACCCGATAGGCCGGTTCTCAAGGTCAGTCCCACAAAAGCGCTCTTTGTTTCGGGagagtctctgtctctctcctgtCAGGCCGAGGGTGAACCTCCCCCCTCCGCCACGTGGTTTTTCAACGGCGAGTCCGTCGCACCGTCTTCAACGGGAACAGTCGTTCTCAGCGACGTTAAGACGAGTCAAAGCGGCATTTATACCTGCGTGATGATCAACACCAGAACTGAGGTGACGCTTCAGAGGAACATCTCTGTAATTGTCTACGAGCCTCCCGGAGGTGAGCCGCTGTGTTCGGTGCGGGCCGTGAACGGAGACGCTGCAGCGCTGCAGTTCCTCTGTCTGTGGCCAGGCGGCGCTCCGGAGGCACGCGTGTCCTTTCCAGGCCTGAGCGTGAACGCCAGTGGGTACGGGAATTACAGCGTGACCGTAAATGACATTCAGAGCTTAAACGGACGAGAAATCATCTGCGAAGCCGAGCATCCTCTGATTCGGACGCAGTGCAGCGTCATTCCTCGTGGTCCTGTGGATTTTCTCCCAGTAATTTTAACCAGCGTGAGTCAAGATGAACAGACGATGGTTGTGATTCGATGCTCTGCTGAAGCGACACCTCAAGCCCTTGTGCAATGGATCAAGAACGGACACCGCTTGCAAACTGGGCCCAAATATCAGATCAGTACAAACACAACTCGGCTGATAATTTATGGTTTTAATGTCACTGCAGACCTCGACACGTACACCTGCGCTGCCATCAACCCTCTCGGGAATAAAACGGTGGACACGACGCTGCTGGgtCCTCAAATCTCCAATTCGAGTGTTTCCCTGAGTATCAACCGAACAGAAGTGACCCTATCATGGGTCGTTCCTCTCACTTCTGTTATTACAGGCTTTGATATCCAGATGAAAGGACCGGAGATCTCAAGCCCATCTCAACCCAAACTCGGCATCGCTTCAGACTTCCTCACCGTCCAATCAGAGCCTGCCTCGGCCAGATCCAGCACGCTCTCAGGACTCAACCCAGAATCCACGTACTACTTCAGAATCGTCCCTAAAGCCGGAAGAACCGCAGGAGAACAGTCCGAGCAGCATCGGATCGGACCAGCTGCTGGACTCAGTGGAGCTGCTATCGCTGGTATCGCTGCTGGAATCCCCTGCgctctcctcctcatcctcattgTGCTGGCCTTCATCTACTGCGGCAGACGTGCAGATCGAATCCCCAGGTATCCTGTATCGAGAGCAACAGAGAAGGCCGTCATCTCTCAGTCTGCTCTGAACCCTCACCGCCTGCTGAGAGCCAGACTGAAACCACCGCCGGCGTACAGACTTCAGCAGCCCGAGCGGTCTTCTCCTTTGCCGTCTGAGAACTCGTGTGCGAGAATGGCCACCACCGTCTGACTCCGAAAGCCTTTAAAGGTGTCCAGGACATTTGTTCGACACGTTGCAGCCCGGACTCGAACCAGTGCCACTCACGTGAGCACCACAGCTGCTCCTGCACCGTTCATTTTTACAAGTGTGTTTTAAATTGCCAGCGCTGTATGAAAATGACCGTTTCTGTAgcttcttttaaaataagtagtgattttgaacgcttttattcagatttaacATTCGTAATGATCAGAAATGCAGGAAAAGTagtaatgacgctgaaaattccgctttgcattaaaggaataaattacgttttgcaatatattcaaataaaaaacagttatttgaaattgtaataatatttcacgattTTACTGCTTTTGCAGAATTTTtgctcaaatatatatatatatatatatatatatatatatatatatttt
>XM_043260290.1
actccTGCCTGCTCGCGGTTTTCGTGCAGCTCAAAACTTCTTAAAACTACGAGAAATCACATTCAGCATGTGTTTGCGATCGCACTGGAAGAGGACAGACGGTCGTACCTGTTATTGATCGATGGGTCTGAAGTGACTGATGGGATGTTTTGTCCAGGTGAAGCTCACCTGCGCGGTTGATTTCTCACCTGTCCGTTTTAGGAGCATGACTCCCGTCATCAAAATTAAACCTCGGACAAACCTGCAGGTTTAAGTTTGGGTCTGGCGAAATGCAGACGCCGTTTGGTTTGGTTTATGTTCTTTTGCTCTTCGTTACAGGCAGCGTGTGTTATCTGAGCATCTTACCCAAGGCTCCTGTGTCGGTGGAAGCTCTGGTGGGCCAGAATGTGACCCTCGGTGTGTCTCACGCCGGCGTCCCTCAGCCCGAGGTCATGTGGTTTAAGGGAAGCCTTCTGGTGGCCAGGTGGACCGTGGGTAACGGCTCTCTTTCGGGTGTCGCATCAGGCGTTTTTAAACCAGAACTGAACGGATCGCTCACCTTCATGAACGTGCCGCTCGGTTATAACGGTACATACACCGTAGAAATGAATCATATTGGGGAGGAAAAGGTCAGCGCTACATTTAACCTCTTTGTTTATGACGTGATCACGAATGTGTCCCTGCGCAGCGATCCAGGAGACGCCGTTGAGGGTGAAGCGAGGTTTACCTTGTATTACAGCACACTGCAAGGGGAGGCCAAAGAGGTGCGGTGGTTCTTTAATGGTCTCCAGTTACGAAATGGATCTCGTTATTCCATCGGCGGGAAGAACCTCACGGTAAACCAGCTCGGCAGGAACGACACGGGCCGCTACGCCGCGTCACTAAGCAACCCGTTCAGCTCCGAGACGCAGGGCAGGAACATCACAGTGCTGTATGGACCCGATAGGCCGGTTCTCAAGGTCAGTCCCACAAAAGCGCTCTTTGTTTCGGGagagtctctgtctctctcctgtCAGGCCGAGGGTGAACCTCCCCCCTCCGCCACGTGGTTTTTCAACGGCGAGTCCGTCGCACCGTCTTCAACGGGAACAGTCGTTCTCAGCGACGTTAAGACGAGTCAAAGCGGCATTTATACCTGCGTGATGATCAACACCAGAACTGAGGTGACGCTTCAGAGGAACATCTCTGTAATTGTCTACGAGCCTCCCGGAGGTGAGCCGCTGTGTTCGGTGCGGGCCGTGAACGGAGACGCTGCAGCGCTGCAGTTCCTCTGTCTGTGGCCAGGCGGCGCTCCGGAGGCACGCGTGTCCTTTCCAGGCCTGAGCGTGAACGCCAGTGGGTACGGGAATTACAGCGTGACCGTAAATGACATTCAGAGCTTAAACGGACGAGAAATCATCTGCGAAGCCGAGCATCCTCTGATTCGGACGCAGTGCAGCGTCATTCCTCGTGGTCCTGTGGATTTTCTCCCAGTAATTTTAACCAGCGTGAGTCAAGATGAACAGACGATGGTTGTGATTCGATGCTCTGCTGAAGCGACACCTCAAGCCCTTGTGCAATGGATCAAGAACGGACACCGCTTGCAAACTGGGCCCAAATATCAGATCAGTACAAACACAACTCGGCTGATAATTTATGGTTTTAATGTCACTGCAGACCTCGACACGTACACCTGCGCTGCCATCAACCCTCTCGGGAATAAAACGGTGGACACGACGCTGCTGGgtCCTCAAATCTCCAATTCGAGTGTTTCCCTGAGTATCAACCGAACAGAAGTGACCCTATCATGGGTCGTTCCTCTCACTTCTGTTATTACAGGCTTTGATATCCAGATGAAAGGACCGGAGATCTCAAGCCCATCTCAACCCAAACTCGGCATCGCTTCAGACTTCCTCACCGTCCAATCAGAGCCTGCCTCGGCCAGATCCAGCACGCTCTCAGGACTCAACCCAGAATCCACGTACTACTTCAGAATCGTCCCTAAAGCCGGAAGAACCGCAGGAGAACAGTCCGAGCAGCATCGGATCGGACCAGCTGCTGGACTCAGTGGAGCTGCTATCGCTGGTATCGCTGCTGGAATCCCCTGCgctctcctcctcatcctcattgTGCTGGCCTTCATCTACTGCGGCAGACGTGATCGAATCCCCAGGTATCCTGTATCGAGAGCAACAGAGAAGGCCGTCATCTCTCAGTCTGCTCTGAACCCTCACCGCCTGCTGAGAGCCAGACTGAAACCACCGCCGGCGTACAGACTTCAGCAGCCCGAGCGGTCTTCTCCTTTGCCGTCTGAGAACTCGTGTGCGAGAATGGCCACCACCGTCTGACTCCGAAAGCCTTTAAAGGTGTCCAGGACATTTGTTCGACACGTTGCAGCCCGGACTCGAACCAGTGCCACTCACGTGAGCACCACAGCTGCTCCTGCACCGTTCATTTTTACAAGTGTGTTTTAAATTGCCAGCGCTGTATGAAAATGACCGTTTCTGTAgcttcttttaaaataagtagtgattttgaacgcttttattcagatttaacATTCGTAATGATCAGAAATGCAGGAAAAGTagtaatgacgctgaaaattccgctttgcattaaaggaataaattacgttttgcaatatattcaaataaaaaacagttatttgaaattgtaataatatttcacgattTTACTGCTTTTGCAGAATTTTtgctcaaatatatatatatatatatatatatatatatatatatattttt

Function

symbol description
vsig10l Predicted to be located in membrane. Predicted to be integral component of membrane. Orthologous to human VSIG10L (V-set and immunoglobulin domain containing 10 like).

NR:

description
V-set and immunoglobulin domain-containing protein 10-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043260289.1 True 2725 mRNA 0.51 12 25735524 25745044
XM_043260290.1 False 2723 mRNA 0.51 12 25735523 25745044

Neighbor

gene id symbol gene type direction distance location
lim2.5 lim2.5,lim2,LOC102215845,LOC100699404 coding downstream 1941 25731193 ~ 25733582 (-)
nek10 nek10,LOC107728980,LOC107552505 coding downstream 6858 25712911 ~ 25728665 (-)
znf385d LOC107671428,LOC107592108,LOC107688204,LOC107716984,LOC107569797 coding downstream 108424 25568531 ~ 25627099 (-)
si:dkey-82o10.4 NA coding downstream 416445 25314054 ~ 25319078 (-)
LOC122360982 rab5ab,LOC107688205,LOC107707637,LOC107716989,LOC100701272,LOC103038585 coding downstream 435662 25294224 ~ 25299861 (-)
etfb etfb,LOC107688199,LOC107707641,LOC107728982,LOC107671471,LOC107552519 coding upstream 1521 25746565 ~ 25752100 (-)
LOC122360054 LOC107707625,LOC107688253,LOC107568862,LOC107733023,LOC107671396,LOC107552509,LOC100004033 coding upstream 339730 26084774 ~ 26088904 (-)
si:ch73-90p23.1 si:ch73-90p23.1,LOC107707631,LOC107688273,LOC107568869,LOC107552515,LOC107733026,LOC107671412 coding upstream 346334 26091378 ~ 26103408 (-)
LOC122360053 LOC107688272,LOC107707632,LOC107552516,LOC107671410,LOC107733025,LOC107568861 coding upstream 358500 26103544 ~ 26107754 (-)
si:dkeyp-97a10.3 LOC107733029,LOC107552521,LOC107671397,LOC107568860 coding upstream 362825 26107869 ~ 26120740 (-)
G116247 LOC107568872,LOC107688200,LOC107728981,LOC107592106,LOC107707640,LOC107671434 non-coding downstream 28727 25704700 ~ 25706796 (-)
G116264 NA non-coding downstream 40166 25694109 ~ 25695357 (-)
G116237 NA non-coding downstream 177505 25211393 ~ 25558018 (-)
G116242 NA non-coding downstream 556916 25177452 ~ 25178607 (-)
G116212 LOC107588526,LOC107755659,LOC107700712,LOC107704880,LOC107705924,LOC108433590,LOC103032252 non-coding downstream 652927 25079267 ~ 25082596 (-)
G116282 NA non-coding upstream 31692 25776736 ~ 25778404 (-)
G116351 NA non-coding upstream 275481 26020525 ~ 26073006 (-)
G116350 NA non-coding upstream 317247 26062291 ~ 26069534 (-)
G116359 NA non-coding upstream 326116 26071160 ~ 26128626 (-)
G116368 NA non-coding upstream 359973 26105017 ~ 26282857 (-)
LOC122361130 LOC107568872,LOC107728981,LOC107671434,LOC107592106,LOC107707640,LOC107688200 other downstream 24837 25664719 ~ 25710686 (-)
serinc2l serinc2l,LOC107587884,LOC107704843,LOC107732828,LOC107755451,LOC107597105 other downstream 1262158 24414226 ~ 24473365 (-)
LOC122359997 LOC107732827,LOC107704842,LOC107587847,LOC107700682,LOC107756122,LOC107597135 other downstream 1365957 24364640 ~ 24369566 (-)
phactr4b phactr4b,LOC107587745,LOC107597106,LOC107700669 other downstream 1395735 24317482 ~ 24339788 (-)
mchr2a mchr2,si:dkey-165n16.5,LOC107587893,LOC107597140,LOC107700674,LOC107716821,LOC107711724 other downstream 2060178 23668065 ~ 23675345 (-)
G116604 slc9a1,LOC107688187,LOC107564092 other upstream 634628 26379672 ~ 26384187 (-)
LOC122360302 man1c1,LOC107713850,LOC107564091,LOC107665908,LOC107729795,LOC108426368,LOC101882461,LOC107601975 other upstream 676674 26421718 ~ 26507052 (-)
G116654 myom3,LOC107659064,LOC107729819 other upstream 1062076 26807120 ~ 26809146 (-)
G116632 fabp10a,LOC107677662,LOC103026354 other upstream 1065273 26810317 ~ 26812974 (-)
G116668 NA other upstream 1129354 26874398 ~ 26876610 (-)

Expression


Co-expression Network