LOC122360027 (LOC107751895,LOC107656720)


Basic Information

Item Value
gene id LOC122360027
gene name LOC107751895,LOC107656720
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056714.1
NCBI id CM032083.1
chromosome length 28146790
location 9145900 ~ 9148999 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043260316.1
AAGCAATCTAACCCGTCCGTCTGGAATCGGGGAGGACGGAACACGACGTGAATACGTGTAGCTAAACGGCGACTACGATGGTGGCATCGGTTGAGCGAAAAAACAAACCGAGTTTTTTGCTTTTAACCTTTTTCAGGCAGAAGTGAAGGAATGTCTGCTGGGTGGATCTTTGAGAAGACAGTGAGTTTCAGTCTGTGAACTCTCCCACACGTGCAGTCAGTCGGCGCTTCAGCAGCATGGAGACTCTTTCTAGTCTGCTCTTTTTACTTCTAACCGTACACTCAGttaaTGGCCTAAAGTGTTACGTGTGTGCCTCGGCGACAACGAATCAAGAATGTAACAAAAACCTTCAGGAATGTCAGTCTCCTCTGGACACCTGCATGACCACTGTAGGCACGCTAGGAGGAGTTTCCGCCATCGCGAAGACGTGCTCCATGTCAAAGCTGTGCACCAGCGCCGCGGCCATCGCCTCTGTGGACAGTAATGGAAACGGCATGCAGGTGACGTGCTGTAACGGTAATCTGTGCAACTACAGCGGAGCTTCCAGCGTCACGCTGCACAGATGGCTGCTGGTGCTGCCGCTGCTCCTCATCAGCCTCCTCTTCAGACAGCACGCTTGAAGACTTCAAACACTTCATCCCGGCACGGACTAAAACGCTCGTCTTATCGAAAATTCTACCGCGCTAACTTCCCTTGTTTGGTAACGGACGTTTGATTTGAAAAGTACAATCTGTTAAACAGATTACGTGTCCCGGAAATGCAGTTATGTAAAAACCTTTGAAGGAAGAATTGCACGGTCCTGTGTTAACTAGAGGATATCATCAAATTATGAGAGCGTTGCGCATGAATTTAAGCCATATGTATGTTGTTAGACAGgggtatatttaaaatgttttaattcttttcccccctcttttacttttaatgcaaatgaatattacaatttaacaaataaaatactaaaatataa

Function

NR:

description
PREDICTED: ly6/PLAUR domain-containing protein 2-like

GO:

id name namespace
GO:0016310 phosphorylation biological_process
GO:0007165 signal transduction biological_process
GO:0004675 transmembrane receptor protein serine/threonine kinase activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043260316.1 True 970 mRNA 0.46 4 9145900 9148999

Neighbor

gene id symbol gene type direction distance location
ptpn2a LOC107748621,LOC107656702,LOC107686952 coding downstream 27782 9112262 ~ 9118118 (-)
cep76 cep76,LOC107684173 coding downstream 35145 9103514 ~ 9110755 (-)
id4 id4,LOC107656716,LOC107748665,LOC107751915,LOC107596695,LOC107684172,LOC107564867 coding downstream 116194 9026980 ~ 9029706 (-)
ncalda ncalda,ncald,LOC100692199,LOC105901278,LOC106931336,LOC103042493,LOC108268956 coding downstream 148914 8961054 ~ 8996986 (-)
grhl2a grhl2a,LOC107748679,LOC107564858,LOC107684167,LOC107596692,LOC107741979,LOC107656701 coding downstream 188450 8946171 ~ 8957450 (-)
LOC122360802 LOC107749154,LOC107596765,LOC107686954 coding upstream 116 9149115 ~ 9157421 (-)
cmtm8b LOC107749122,LOC107702023,LOC107564882,LOC107751904,LOC107661990,LOC107570991 coding upstream 170556 9319555 ~ 9322529 (-)
ulk4 ulk4,LOC107723070,LOC107704090,LOC107570990,LOC107668185,LOC107657572,LOC107564876,LOC107573651 coding upstream 238511 9387510 ~ 9523997 (-)
ccka LOC107751914,LOC107704089,LOC107601665,LOC107657574 coding upstream 478247 9627246 ~ 9629046 (-)
trim71 trim71,LOC107751884,LOC107601676,LOC107704101,LOC107657583,LOC107723073,LOC107551222 coding upstream 529224 9678223 ~ 9702267 (-)
G110852 NA non-coding downstream 114451 9031135 ~ 9031449 (-)
G110849 NA non-coding downstream 138368 9007297 ~ 9007532 (-)
G110842 NA non-coding downstream 140694 9004538 ~ 9005206 (-)
G110836 NA non-coding downstream 144472 9000787 ~ 9001428 (-)
G110807 NA non-coding downstream 299907 8845525 ~ 8845993 (-)
G111005 NA non-coding upstream 237180 9386179 ~ 9387391 (-)
G111021 LOC102788557 non-coding upstream 450933 9599932 ~ 9607073 (-)
G111024 NA non-coding upstream 471120 9620119 ~ 9620453 (-)
G111025 NA non-coding upstream 474701 9623700 ~ 9624119 (-)
G111045 NA non-coding upstream 525865 9674864 ~ 9676505 (-)
wu:fj39g12 nppcl,LOC107744681,LOC107699924,LOC107749278,LOC107685603 other downstream 509678 8633350 ~ 8636222 (-)
G110556 NA other downstream 829215 8312265 ~ 8316685 (-)
G110554 cbx3,LOC107596654,LOC107743152,LOC107744695,LOC107550827 other downstream 843655 8298789 ~ 8302245 (-)
G110544 NA other downstream 929305 8216029 ~ 8216595 (-)
mkxb mkxb,LOC107681765,LOC107566716,LOC107691300,LOC107550429,LOC107747522,LOC107708850 other downstream 1053445 8082900 ~ 8092455 (-)
G110974 NA other upstream 121972 9270971 ~ 9272605 (-)
gask1a fam198a,LOC107732434,LOC107657576,LOC107751903,LOC107704082 other upstream 728212 9877211 ~ 9902981 (-)
LOC122361037 cables1,LOC107708521,LOC107747516,LOC107681774,LOC107691165 other upstream 1596577 10745576 ~ 10764305 (-)
LOC122360812 cobl,LOC107746964,LOC107684220,LOC107551210 other upstream 1708521 10857520 ~ 10883424 (-)
G111450 mal2,LOC107757438,LOC107571097,LOC107677950,LOC107738940 other upstream 2120621 11269620 ~ 11286432 (-)

Expression


Co-expression Network