si:dkey-247k7.2


Basic Information

Item Value
gene id si:dkey-247k7.2
gene name NA
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056714.1
NCBI id CM032083.1
chromosome length 28146790
location 15147024 ~ 15150068 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043260338.1
CTCTTTTCTCTGTATCATATGTATAAATGGGTGGTGATATGTAAATCACATTTCTAGTAGTTCTCCTCTCCTTGCTCAGAGCAGAAGGCAGTTTCTCTTCAGACTTGATACAGTCTCGGTTTTGATCTTGCAAATCATCTTCAACAATGGCACAGATTGTCCATGTGGTGGCAGTGTTGGGCCTGTGTCTGCTGGCTGCTGTGGTGAACTCTCAAGAGAACAACCCCCCACCACCTCCTCGTCTCGGACAAGAGATCTGCACATACTACACTCAGAGCGGGACCCTCCTTCTGGACGGGCCAAAGGTCTTTGAAATGATGCTGATTGAGTTTGGACGAGCAATCCAGACCCTGAACCCTATGGTGACTCAACAGTGGATGGATGAAGTAGATGATGATCACGACAAGTCTCTTAACCTGGCAGAGTGTGCCAAACTCGTCCAGAGAGTCTCTGATTCTATTCAGAGGCCTCCACAATAAAGAGGTCATGACACCGATTGAAGTAACTGAAGTATATGAAGCACATGGACGAGTatgaagaaatatataatatctcaCAAACACTTAGTATGTAGGTCTGTAGCTTAATCTCATGTAACAATGTTTCAATCATAATCTAAACAAAGCTATGTAGCGTTTTAgaaattactttaaaacaagaaatttTGACTCTTAGtcataataaaatttttatcaaaaata

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043260338.1 True 701 mRNA 0.41 4 15147024 15150068

Neighbor

gene id symbol gene type direction distance location
shc1 shc1,LOC107714692,LOC107677023,LOC107723450 coding downstream 189789 14927037 ~ 14957235 (-)
LOC122361105 LOC107582131 coding downstream 220128 14926292 ~ 14926896 (-)
pbxip1b LOC107714683,LOC107673634 coding downstream 222507 14913948 ~ 14924517 (-)
s100t LOC107714712,LOC107594934,LOC107673706,LOC107677025,LOC107582066,LOC107723416 coding downstream 247977 14896221 ~ 14899047 (-)
LOC122360979 LOC107673736,LOC107714679,LOC107723515,LOC107677031,LOC107582064,LOC107596123,LOC561423 coding downstream 400399 14727085 ~ 14746625 (-)
trim46a trim46,trim46a,LOC107714687,LOC107723477,LOC107582073,LOC107595016 coding upstream 1676 15151744 ~ 15163625 (-)
osgin2 osgin2,LOC107723494,LOC107596464,LOC107714693,LOC107582167,LOC107699543 coding upstream 182590 15332658 ~ 15340225 (-)
LOC122360842 NA coding upstream 192263 15342331 ~ 15342771 (-)
LOC122360653 LOC107596174,LOC107714661 coding upstream 205566 15355634 ~ 15362140 (-)
bcam LOC107714691,LOC107595169,LOC107699531,LOC107657655,LOC107723516 coding upstream 280752 15430820 ~ 15476204 (-)
G113039 NA non-coding downstream 199640 14946595 ~ 14947384 (-)
G113034 NA non-coding downstream 254629 14892040 ~ 14892395 (-)
G112686 NA non-coding downstream 431533 14715216 ~ 14715491 (-)
G112659 NA non-coding downstream 492874 14591362 ~ 14654150 (-)
LOC122359963 NA non-coding downstream 508692 14633214 ~ 14638332 (-)
G113090 NA non-coding upstream 14929 15164997 ~ 15165440 (-)
G113092 s100a10b,LOC107714718,LOC107595024,LOC105891828 non-coding upstream 18305 15168373 ~ 15170070 (-)
G113125 NA non-coding upstream 157797 15307865 ~ 15308418 (-)
G113136 NA non-coding upstream 175491 15325559 ~ 15428662 (-)
G113147 NA non-coding upstream 197105 15347173 ~ 15348215 (-)
si:dkey-246i14.3 si:dkey-246i14.3,efna4,LOC107595001,LOC107714708,LOC107723547,LOC107677033,LOC107582070,LOC108269281 other downstream 131562 14970541 ~ 15015462 (-)
LOC122359907 LOC107594909 other downstream 233378 14908620 ~ 14913646 (-)
si:ch211-105c13.3 si:ch211-105c13.3,LOC107673711,LOC107594941,LOC107582067,LOC107677027,LOC107735771 other downstream 242117 14899182 ~ 14904907 (-)
LOC122359961 riiad1 other downstream 559155 14582479 ~ 14587869 (-)
dicp3.3 NA other downstream 643888 14498263 ~ 14503136 (-)
rps27.2 rps27.2,LOC107699547,LOC107582081,LOC106605923,LOC108429942,LOC107589412,LOC106598061 other upstream 151806 15301874 ~ 15306611 (-)
LOC122360651 LOC107596174,LOC107714662,LOC107714661 other upstream 215120 15365188 ~ 15375304 (-)
rps19 rps19,LOC107657656,LOC103354132,LOC100689943 other upstream 318412 15468480 ~ 15496413 (-)
fxyd6l si:dkey-56f14.4,fxyd6l,LOC107570838,LOC107657592,LOC107723383,LOC107570836,LOC107714713,LOC107699456,LOC107657664,LOC107723441 other upstream 509684 15659752 ~ 15672151 (-)
G113203 fpr1,LOC107714672,LOC107699476,LOC107593626,LOC107657616,LOC107595349,LOC107723415,LOC108429924,LOC108265369 other upstream 666911 15816979 ~ 15819086 (-)

Expression


Co-expression Network